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Comparative study on genetic differences between Mongolian and Japanese populations

Research Project

Project/Area Number 17590578
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Legal medicine
Research InstitutionNagoya University

Principal Investigator

UCHIHI Rieko (2006)  Nagoya University, Graduate School of Medicine, Research Associate, 大学院医学系研究科, 助手 (20223571)

勝又 義直 (2005)  名古屋大学, 大学院・医学系研究科, 教授 (30109326)

Co-Investigator(Kenkyū-buntansha) YAMAMOTO Toshimichi  Nagoya University, Graduate School of Medicine, Associate Professor, 大学院医学系研究科, 助教授 (50260592)
打樋 利英子  名古屋大学, 大学院医学系研究科, 助手 (20223571)
Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2006: ¥1,500,000 (Direct Cost: ¥1,500,000)
Fiscal Year 2005: ¥2,000,000 (Direct Cost: ¥2,000,000)
KeywordsPopulation genetics / Mongolian / Japanese / Genetic difference / STR / Y-STR
Research Abstract

DNA samples as buccal swabs collected from each 200 healthy Mongolian individuals with informed consents in Ulaanbaatar (central area), Ulaangom (western area) and Dalandzadgad (in the Gobi desert as southern area) on August, 2005, and in Undurkhaan (northeastern area), Choybalsan (eastern area) on June, 2006. DNA from total 1,000 buccal swabs in five regional populations were extracted and quantified. All of those samples were genotyped for 15 STR loci and amelogenin for gender determination using an AmpFlSTR Identifiler kit. In those samples, 97 from Ulaanbaatar, 95 from Ulaangom, 100 from Dalandzadgad, 117 from Choybalsan, and 84 from Undurkhaan male samples were also analyzed using an AmpFlSTR Yfiler kit. Allele frequency data were calculated for 15 autosomal STR markers, and three tests for Hardy-Weinberg equilibrium (HWE) were performed for each locus in each regional population. No departure from HWE at all the loci in all of those five populations was observed by all the three tests. Using published and our data for those 15 STR loci in Japanese regional populations and regional populations in East and Southeast Asia, and five regional Mongolian populations in this study, a Neighbor-Joining (NJ) tree based on DA genetic distance was constructed and a Multi-Dimensional Scaling (MDS) analysis was performed. As a result, all of the five regional Mongolian populations formed a cluster in the NJ tree, and those distributions were consistent with those geographical distributions in the MDS plot. By the haplotype analysis for 17 Y-STRs, two unique clusters for Japanese were observed.
In the present study, it is suggested that genetic differences between five regional Mongolian populations and Japanese regional populations are not smaller than those between those Mongolian populations and their geographically closer populations, and that a hypothesis where the origin of Japanese exists among Buryat in Mongolia is potentially inconsistent.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (19 results)

All 2007 2006 2005

All Journal Article (17 results) Book (2 results)

  • [Journal Article] Population data of six STR loci using hexaplex PCR amplification and typing system, "Midi-6" in four regional populations in Japan2007

    • Author(s)
      R.Uchihi
    • Journal Title

      Forensic Sci. Int. (in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Allele frequencies of six miniSTR loci (D20S480, D6S2439, D6S1056, D9S1118, D4S2639 and D17S1290), "Midi-6", in a Basque Country autochthonous population2007

    • Author(s)
      O.Garcia
    • Journal Title

      Forensic Sci. Int. (in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Population data of six STR loci using hexaplex PCR amplification and typing system, "Midi-6" in four regional populations in Japan.2007

    • Author(s)
      Uchihi R
    • Journal Title

      Forensic Science International (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Allele frequencies of six miniSTR loci (D20S480, D6S2439, D6S1056, D9S1118, D4S2639 and D17S1290), "Midi-6", in a Basque Country autochthonous population.2007

    • Author(s)
      Garcia O
    • Journal Title

      Forensic Science International (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Phylogenetic relationship of the populations within and around Japan using 105 short tandem repeat polymorphic loci2006

    • Author(s)
      S-L. Li
    • Journal Title

      Hum. Genet. 118

      Pages: 695-707

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Allele frequency distributions at three pentanucleotide repeat STR in a Japanese population2006

    • Author(s)
      H.Ohtaki
    • Journal Title

      J. Forensic Sci. 51(1)

      Pages: 193-194

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 新しい市販のY-STR型判定用マルチプレックスキットで観察された突然変異2006

    • Author(s)
      吉本高士
    • Journal Title

      DNA多型 14

      Pages: 234-236

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Phylogenetic relationship of the populations within and around Japan using 105 short tandem repeat polymorphic loci.2006

    • Author(s)
      Li S-L
    • Journal Title

      Human Genetics 118

      Pages: 695-707

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Allele frequency distributions at three pentanucleotide repeat STR in a Japanese population.2006

    • Author(s)
      Ohtaki H
    • Journal Title

      Journal of Forensic Sciences 51(1)

      Pages: 193-194

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Mutations observed at 17 Y-STR loci using a newly commercially released multiplex kit among Japanese father-son relationships.2006

    • Author(s)
      Yoshimoto T
    • Journal Title

      DNA Polymorphisms 14

      Pages: 234-236

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Phylogenetic relationship of the populations within and around Japan using 105 short tandem repeat polymorphic loci2006

    • Author(s)
      S-L.Li
    • Journal Title

      Hum.Genet. 118

      Pages: 695-707

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Allele frequency distributions at three pentanucleotide repeat STR in a Japanese population2006

    • Author(s)
      H.Ohtaki
    • Journal Title

      J.Forensic Sci. 51(1)

      Pages: 193-194

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 新しいペンタヌクレオチドSTRマルチプレックス・タイピングシステム2005

    • Author(s)
      打樋利英子
    • Journal Title

      DNA多型 13

      Pages: 21-23

    • NAID

      10015685125

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2005 Annual Research Report
  • [Journal Article] 日本人で識別力の高い非コード領域のSNPsのアリール特異的PCRマルチプレックス判定法2005

    • Author(s)
      井上知加子
    • Journal Title

      DNA多型 13

      Pages: 24-26

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] A new multiplex typing system for three pentanucleotide STR loci.2005

    • Author(s)
      Uchihi R
    • Journal Title

      DNA Polymorphisms 13

      Pages: 21-23

    • NAID

      10015685125

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] A novel quadruplex typing system by allele-specific PCR for SNPs in non-coding regions with high discriminating power in Japanese.2005

    • Author(s)
      Inoue C
    • Journal Title

      DNA Polymorphisms 13

      Pages: 24-26

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 日本人で認識力の高い非コード領域のSNPsのアリール特異的PCRマルチプレックス判定法2005

    • Author(s)
      井上知加子
    • Journal Title

      DNA多型 13

      Pages: 24-26

    • Related Report
      2005 Annual Research Report
  • [Book] DNA鑑定-その能力と限界-2005

    • Author(s)
      勝又 義直
    • Total Pages
      305
    • Publisher
      名古屋大学出版会
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2005 Annual Research Report
  • [Book] DNA profiling - Its ability and limitations.2005

    • Author(s)
      Katsumata Y
    • Publisher
      Nagoya University Press
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary

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Published: 2005-04-01   Modified: 2016-04-21  

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