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Kinetic analysis of minimal residual disease using 3-dimentinal computational models of human granulopoiesis and development of risk of relapse-stratified treatment of pediatric leukemia.

Research Project

Project/Area Number 17591073
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Pediatrics
Research InstitutionKanazawa University

Principal Investigator

SAIKAWA Yutaka  University Hospital, Assistant Professor, 医学部附属病院, 講師 (60283107)

Co-Investigator(Kenkyū-buntansha) KOMATSUZAKI Toshihiko  Natural Science & Technology, Assistant Professor, 医学部附属病院, 講師 (80293372)
Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2006: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 2005: ¥2,600,000 (Direct Cost: ¥2,600,000)
KeywordsGranulopoiesis / Computer simulation / Systems biology / Kinetic analysis of cellular behaviour / コンピュータシミュレーション
Research Abstract

In 2005, we attempted to develop a unique computational model of human granulopoiesis to identify the regulatory mechanisms for homeostatic hematopoiesis. A computational approach with mathematical-modeling of the hematopoietic system has been applied for exploring the principles that underlie the system. Models are required of easy access and highly expected to integrate details and reproduce the dynamic behaviors of the cells but also to predict the specific cellular behaviors in response to various simulations. We have successfully developed a new lateral computational modeling for human granulopoiesis using three-dimensional Cellular Automata (3D-CA), which incorporates a spatio-temporal concept to describe the granulopoietic process developing in the finite space of bone marrow cavity. We emphasize unique properties of this model as following ; 1)the model does not contain either governing equations or negative feedback loops assumed for regulation and 2)one can directly view this in silico granulopoiesis on the computer screen, in which HSCs replicate, differentiate, and distribute their offspring in an analytical space consisting of 130 x 130 x 130 unit cubic areas with structural objects assuming vessels and trabecular bones. The model reified the principle that local interaction of individual granulopoietic cells produced feedback circuits leading global dynamics and stability of the system.
In 2006, we further applied this model to analyze cellular dynamics of granulopoiesis under chemotherapy and hematopoietic stem cell transplantation. Simulation studies predicted efficacy and minimal requirement of G-CSF scheduling for drug-induced neutropenia. Cellular dynamics of homing HSCs explained difference of engraftment periods observed in different utilization of stem cell sources in transplantation. Learning cellular behaviors from computational hematology could provide the novel strategies for the treatment of hematological malignancies.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (15 results)

All 2007 2006

All Journal Article (15 results)

  • [Journal Article] Pancreatic and Renal Involvement in Pediatric Acute Lymphoblastic Leukemia/Lymphoma2007

    • Author(s)
      Y.Ikawa, et al.
    • Journal Title

      Journal of Clinical Oncology 25・4

      Pages: 451-453

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Monoblastic Sarcoma of the Kidneys in an Infant Leukaemia2007

    • Author(s)
      Y.Ikawa, et al.
    • Journal Title

      European Journal of Haematology 78

      Pages: 181-181

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Pancreatic and Renal Involvement in Pediatric Acute Lymphoblastic Leukemia/Lymphoma2007

    • Author(s)
      Yasuhiro Ikawa
    • Journal Title

      Journal of Clinical Oncology 25・4

      Pages: 451-453

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Monoblastic Sarcoma of the Kidneys in an Infant2007

    • Author(s)
      Leukaemia Yasuhiro Ikawa
    • Journal Title

      European Journal of Haematology 78

      Pages: 181-181

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Pancreatic and Renal Involvement in pediatric Acute Lymphoblastic Leukemia/Lymphoma2007

    • Author(s)
      Y.Ikawa, Y.Saikawa, et al.
    • Journal Title

      Journal of Clinical Oncology 25

      Pages: 451-453

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Monoblastic sarcoma of the kidneys in an infant leukaemia2007

    • Author(s)
      Y.Ikawa, Y.Saikawa
    • Journal Title

      European Journal of Haematology 78

      Pages: 181-181

    • NAID

      120001133467

    • Related Report
      2006 Annual Research Report
  • [Journal Article] In silico granulopoiesisの作成-顆粒球系造血シミュレーションソフト : 骨髄ぐん-2006

    • Author(s)
      小林裕美
    • Journal Title

      金沢大学自然科学研究科 博士前期課程 修士論文

      Pages: 1-39

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Granulopoiesis in Computational Hematology2006

    • Author(s)
      Y.Saikawa, et al.
    • Journal Title

      Book of abstract, International Conference of Computational Methods in Systems Biology, 2006

      Pages: 13-14

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Hemophagocytic Alveolar Rhabdomyosarcoma2006

    • Author(s)
      Y.Saikawa, et al.
    • Journal Title

      Journal of Clinical Oncology 24・36

      Pages: 5783-5784

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 「研究成果報告書概要(欧文)」より2006

    • Author(s)
      In silico granulopoiesis Hiromi Kobayashi
    • Journal Title

      Thesis of Graduate School of Natural Science

      Pages: 1-39

    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Granulopoiesis in Computational Hematology2006

    • Author(s)
      Yutaka Saikawa
    • Journal Title

      Book of Abstracts, International Conference of Computational Methods in Systems Biology

      Pages: 13-14

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Hemophagocytic Alveolar Rhabdomyosarcoma2006

    • Author(s)
      Yutaka Saikawa
    • Journal Title

      Journal of Clinical.Oncology 24・36

      Pages: 5783-5784

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Granulopoiesis in Computational Hematology2006

    • Author(s)
      Y.Saikawa, T.Komatsuzaki, et al.
    • Journal Title

      Book of abstract,International Conference of Computational Methods in Systems Biology,2006 ?

      Pages: 13-14

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Hemophagocytic alveolar rhabdomyosarcoma.2006

    • Author(s)
      Y.Saikawa, T.Tone, et al.
    • Journal Title

      Journal of Clinical Oncology 24

      Pages: 5783-5784

    • Related Report
      2006 Annual Research Report
  • [Journal Article] In silico granulopoiesisの作成-顆粒球系造血シミュレーションソフト:骨髄くん-2006

    • Author(s)
      小林裕美
    • Journal Title

      金沢大学自然科学研究科 博士前期課程 修士論文

      Pages: 1-24

    • Related Report
      2005 Annual Research Report

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Published: 2005-04-01   Modified: 2016-04-21  

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