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Comprehensive genome analysis using DNA microarray during liver regeneration after partial hepatectomy and living donor liver transplantation

Research Project

Project/Area Number 17591365
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Digestive surgery
Research InstitutionHirosaki University

Principal Investigator

HAKAMADA Kenichi  Hirosaki University, School of Medicine, Associate Professor, 医学部, 助教授 (30271802)

Co-Investigator(Kenkyū-buntansha) TOYOKI Yoshikazu  Hirosaki University, University Hospital, Assistant, 医学部附属病院, 助手 (70301025)
UMEHARA Yutaka  Hirosaki University, University Hospital, Assistant, 医学部附属病院, 助手 (80322931)
SASAKI Mutsuo  Hirosaki University, School of Medicine, Professor, 医学部, 教授 (10005077)
池永 照史郎一期  弘前大学, 医学部附属病院, 医員
Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥3,700,000 (Direct Cost: ¥3,700,000)
Fiscal Year 2006: ¥600,000 (Direct Cost: ¥600,000)
Fiscal Year 2005: ¥3,100,000 (Direct Cost: ¥3,100,000)
KeywordsMicroarray / liver regeneration / liver failure / organic anion / ATP binding cassette transporter / bilirubin / hyperbilirubinemia
Research Abstract

Background. Liver damage with hyperbilirubinemia during regeneration of the small liver is the major hurdle to expand indications of adult living donor liver transplantation. We previously reported that decrease in multidrug resistance protein (MRP) 2 and expression of MRP3 during liver regeneration lead to conjugated hyperbilirubinemia after 90% hepatectomy in rats. However, the genetic control of these ATP binding cassette (ABC) transporters under comprehensive review of the gene expression profile during liver regeneration have not been performed yet.
Methods. RNAs were prepared from three rat livers at each time point of 0,24,72, and 168 hr after 90% hepatectomy. Gene expression profile was analyzed by the Rat Genome 230 2.0 array with special references to ABC transporters. Those from rat livers treated with lipopolysaccharide after 70% hepatectomy were also analyzed.
Results. Among 31,042 probes, 1587 reported genes were identified either up-or down-regulated, more than 2-fold. Among 16 ABC transporter genes, MRP2 and OATP1 were significantly down-regulated, while MRP1 and MRP3 tended to be expressed. These genetic changes were confirmed by real-time PCR. These changes were enhanced synergistically by adding lipopolysaccharide during liver regeneration.
Conclusions. Microarray analysis demonstrated not only extensive gene expression profile in the regenerating liver but more specific molecular events related to bilirubin transport at the same time. Changes in expression pattern of ABC transporters, especially down-regulation of MRP2,seem the key event in liver failure during liver regeneration.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (7 results)

All 2006 2005

All Journal Article (7 results)

  • [Journal Article] Plasma exchange-based plasma recycling dialysis system as a potential platform for artificial liver support2006

    • Author(s)
      Nishimura A, Umehara Y, Hakamada K, et al.
    • Journal Title

      Artif Organs 30

      Pages: 629-629

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Plasma exchange-based plasma recycling dialysis system as a potential platform for artificial liver support.2006

    • Author(s)
      Nishimura A, Umehara Y, Hakamada K, et al.
    • Journal Title

      Artif Organs 30

      Pages: 629-629

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Comprehensive genome analysis of hepatocytes during liver regeneration and liver failure2005

    • Author(s)
      Hakamada K, Kimura N, Ikenaga S, et al.
    • Journal Title

      Hepato-Gastroenterology 52

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 術後肝不全におけるビリルビン排泄蛋白発現異常2005

    • Author(s)
      袴田 健一, 木村 憲央, 他
    • Journal Title

      日本消化器外科学会雑誌 38

      Pages: 934-934

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2005 Annual Research Report
  • [Journal Article] Comprehensive genome analysis of hepatocytes during liver regeneration and liver failure.2005

    • Author(s)
      Hakamada K, Kimura N, Ikenaga SK, et al.
    • Journal Title

      Hepato-Gastroenterology 52

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Abnormalities in expression of bilirubin transporting protein during liver failure.2005

    • Author(s)
      Hakamada K, Kimura N, Sasaki M.
    • Journal Title

      Jpn J Gastroenterol Surg 38

      Pages: 934-934

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Comprehensive genome analysis of hepatocytes during regeneration and liver failure2005

    • Author(s)
      Hakamada K, Kimura N, Ikenaga S, et al.
    • Journal Title

      Hepato-Gastroenterology 52

    • Related Report
      2005 Annual Research Report

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Published: 2005-04-01   Modified: 2016-04-21  

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