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Genomic alterations of the gastrointestinal cancers

Research Project

Project/Area Number 17591413
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Digestive surgery
Research InstitutionKYUSHU UNIVERCITY

Principal Investigator

YOSHITAKE Shinichirou  Kyushu University, Hospital, Department of Anestheology, Assistant Professor, 大学病院, 講師 (80315142)

Co-Investigator(Kenkyū-buntansha) INOUE Hiroshi  Kyushu University, Medical Insttitute of Bioregulation, Department of Molecular and Cellular Biology, Associate Professor, 生体防御医学研究所, 助教授 (90203249)
INOUE Kenji  Kyushu University, Hospital, Department of Molecular and Cellular Biology, Fellow, 大学病院, 医員 (20403917)
Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2006: ¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 2005: ¥2,200,000 (Direct Cost: ¥2,200,000)
KeywordsDNA microarray / Esophageal cancer / BAC / microdissection / loss / gain / genomic alteration / DNAマイクロアレイ / 食道癌 / BACアレイ / ゲノムアレイ
Research Abstract

Genomic alterlations of the gastrointestinal cancer were surveyed with BAC-based DNA Microarray. 23 cases of esophageal cancer cases were employed and DNAs of the tumor and surrounding normal mucosa were extracted with lazar micirodissection apparatus and purified. BAC microarray comprising of 4030 human genomic spots were applied for the analysis. Amplitude level of each spots were all found to remain within the log ±0.5 of the signal deviation. Among 4.030 genomic spots, 33 representative loci were shown to be correlated with the patient's long-range prognosis. Each spot has an average of 1 to 5 genes, which might be closely related to carcinogenesis.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (21 results)

All 2007 2006 2005

All Journal Article (21 results)

  • [Journal Article] BAC Clones Related to Prognosis in Patients with Esophageal Squamous Carcinoma : An Array Comparative Genomic Hybridization Study2007

    • Author(s)
      Hirasaki, S.他
    • Journal Title

      Oncologist 12

      Pages: 406-417

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] A specific gene-expression signature quantifies the degree of hepatic fibrosis in patients with chronic liver disease2007

    • Author(s)
      Utsunomiya, T. 他
    • Journal Title

      World J Gastroenterol 33

      Pages: 383-390

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] BAC Clones Related to Prognosis in Patients with Esophageal Squamous Carcinoma : An Array Comparative Genomic Hybridization Study.2007

    • Author(s)
      Hirasaki S, Noguchi T, Mimori K, Onuki O, Morita M, Inoue H, Sugihara K, Mori M, Hirano T.
    • Journal Title

      Oncologist 12

      Pages: 406-17

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] A specific gene-expression signature quantifies the degree of hepatic fibrosis in patients with chronic liver disease.2007

    • Author(s)
      Utsunomiya T, Okamoto M, Wakiyama S, Hashimoto M, Fukuzawa K, Ezaki T, Aishima S, Yoshikawa Y, Hanai T, Inoue H, Barnard G F, Mori M.
    • Journal Title

      World J Gastroenterol 13(3)

      Pages: 383-90

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Significance of skp2 expression in primary breast cancer.2006

    • Author(s)
      Sonoda H. 他
    • Journal Title

      Clin Cancer Res 12

      Pages: 1215-1220

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Fatty acid binding protein 6 is overexpressed in colorectal cancer.2006

    • Author(s)
      Ohmachi T. 他
    • Journal Title

      Clin Cancer Res 12

      Pages: 5090-5095

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] FHIT is up-regulated by inflammatory stimuli and inhibits prostaglandin E2-mediated cancer progression2006

    • Author(s)
      Mimori, K. 他
    • Journal Title

      Cancer Res 66

      Pages: 2683-2690

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Significance of skp2 expression in primary breast cancer.2006

    • Author(s)
      Sonoda H, Inoue H, Ogawa K, Utsunomiya.T, Masuda TA, Mori M.
    • Journal Title

      Clin Cancer Res 12(4)

      Pages: 1215-20

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Fatty acid binding protein 6 is overexpressed in colorectal cancer.2006

    • Author(s)
      Ohmachi T, Inoue H, Mimori K, Tanaka F, Sasaki A, Kanda T, Fujii H, Yanaga K, Mori M.
    • Journal Title

      Clin Cancer Res 12(17)

      Pages: 5090-5

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] FHIT is up-regulated by inflammatory stimuli and inhibits prostaglandin E2-mediated cancer progression.2006

    • Author(s)
      Mimori K, Ishii H, Nagahara H, Sudo T, Yamashita K, Inoue H, Barnard GF, Mori M.
    • Journal Title

      Cancer Res 66(5)

      Pages: 2683-90

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Identification of EGFR mutations in esophageal cancer2006

    • Author(s)
      Sodo, T.他
    • Journal Title

      Eur J Surg Oncol 33

      Pages: 44-8

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Significance of skp2 expression in primary breast cancer2006

    • Author(s)
      Sonoda, H.他
    • Journal Title

      Clin Cancer Res 12

      Pages: 1215-20

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Specific gene-expression profiles of noncancerous liver tissue predict the risk for multicentric occurrence of hepatocellular carcinoma in hepatitis C virus-positive patients2006

    • Author(s)
      Okamoto, M.他
    • Journal Title

      Ann Surg Oncol 13

      Pages: 947-954

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Expression of the TRAG-3 gene in human esophageal cancer : The frequent synchronous expression of MAGE-3 gene2006

    • Author(s)
      Ohta, M.他
    • Journal Title

      Oncol Rep 15

      Pages: 1529-32

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Clinical singificance of TROP2 expression in colorectal cancer2006

    • Author(s)
      Ohmachi, T.他
    • Journal Title

      Clin Cancer Res 12

      Pages: 3057-63

    • Related Report
      2006 Annual Research Report
  • [Journal Article] FHIT is up-regulated by inflammatory stimuli and inhibits prostaglandin E2-mediated cancer progression2006

    • Author(s)
      Mimori, K.他
    • Journal Title

      Cancer Res 66

      Pages: 2683-90

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Significance of skp2 expression in primary breast cancer2006

    • Author(s)
      Sonoda H. et al.
    • Journal Title

      Clin Cancer Res 12

      Pages: 1215-1220

    • Related Report
      2005 Annual Research Report
  • [Journal Article] FHIT Is Up-Regulated by Inflammatory Stimuli and Inhibits Prostaglandi E2-Mediated Cancer Progression2006

    • Author(s)
      Mimori K. et al.
    • Journal Title

      Cancer Res 66

      Pages: 2683-2690

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Genetic susceptibility of catechol-O-methyltransferase polymorphism in Japanese patients with breast cancer2005

    • Author(s)
      Inoue, H., et al.
    • Journal Title

      Oncol Rep 14

      Pages: 707-712

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Clinical significance of human kallikrein gene 6 messenger RNA expression in colorectal cancer.2005

    • Author(s)
      Ogawa, K et al.
    • Journal Title

      Clin Cancer Res 11

      Pages: 2889-2893

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Global Analysis of Altered Gene Expressions during the Process of Esophageal Squamous Cell Carcinogenesis in the Rat : A Study Combined with a Laser Microdissection and a cDNA Microarray. Cancer2005

    • Author(s)
      Nishida K. et al.
    • Journal Title

      Cancer Res 65

      Pages: 401-409

    • Related Report
      2005 Annual Research Report

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Published: 2005-04-01   Modified: 2016-04-21  

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