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Comprehensive and quantitative profiling of microflora of human apical periodontitis

Research Project

Project/Area Number 17591985
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Conservative dentistry
Research InstitutionTohoku University

Principal Investigator

SATO Takuichi  Tohoku University, Grad Sch of Dentistry, Lecturer (10303132)

Co-Investigator(Kenkyū-buntansha) SHIMAUCHI Hidetoshi  Tohoku University, Grad Sch of Dentistry, Professor (70187425)
TAKAHASHI Nobuhiro  Tohoku University, Grad Sch of Dentistry, Professor (60183852)
YAMAKI Keiko  Tohoku University, Grad Sch of Dentistry, Assistant Professor (90182419)
MATSUYAMA Junko  Niigata Univ, Grad Sch of Med & Dent, Assistant Professor (30293236)
Project Period (FY) 2005 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥2,610,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥210,000)
Fiscal Year 2007: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2006: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 2005: ¥1,000,000 (Direct Cost: ¥1,000,000)
KeywordsDentistry / Oral bacteria / Apical periodontitis / PCR / 16S ribosomal RNA
Research Abstract

The purpose of the present study was to profile microflora of root canals before and after root canal therapy, using real-time PCR, PCR-cloning, PCR-sequence analyses based on 16S rRNA genes. Informed consent was obtained from each subject and single-rooted teeth with periapical lesions were investigated. Upon access opening, each dentin sample was collected from the root canal. When the periapical lesion healed clinically through chemo-mechanical cleaning and intracanal medication, the root canal dentin sample was obtained again. The quantification of total bacterial DNA was performed by real-time PCR using universal primers based on 16S rRNA genes. PCR products were cloned and partially sequenced. The partial 16S rRNA gene sequences were then compared with those from the GenBank database using the Blast search program through the website of the NCBI (National Center for Biotechnology Information). The concentrations of bacterial DNA after root canal therapy were lower than those upon access opening. The PCR-cloning and PCR-sequence analyses revealed that Fusobacterium were initially predominant, and that Pseudomonas, Bradyrhizobium and Methylobacterium were predominant after root canal therapy. These results indicated that drastic shifts occurred in microflora of root canals by root canal therapy.

Report

(4 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • Research Products

    (25 results)

All 2009 2008 2007 2006 2005

All Journal Article (20 results) (of which Peer Reviewed: 1 results) Presentation (3 results) Book (2 results)

  • [Journal Article] Host β-globin-gene fragments of crevicular fluid as a biomarker in periodontal health and disease2009

    • Author(s)
      Boonyanit Thaweboon
    • Journal Title

      J Periodontal Res 44(印刷中)

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Profiling of bacterial flora in crevices around titanium orthodontic anchor plates2007

    • Author(s)
      Renya, Sato
    • Journal Title

      Clin Oral Implant Res 18(1)

      Pages: 21-26

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Nested PCR for the sensitive detection of cariogenic bacteria2007

    • Author(s)
      Takuichi, Sato
    • Journal Title

      Cariology, Today 3&4

      Pages: 17-20

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Profiling of bacterial flora in crevices around titanium orthodontic anchor plates.2007

    • Author(s)
      Renya Sato
    • Journal Title

      Clin Oral Implant Res 18(1)

      Pages: 21-26

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Nested PCR for the sensitive detection of cariogenic bacteria.2007

    • Author(s)
      Takuichi Sato
    • Journal Title

      Cariology Today 3 & 4

      Pages: 17-20

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Microflora profiling of root canal utilizing real-time PCR and cloning-sequence analyses based on 16S rRNA genes -Differences between before and after root canal treatments-.2007

    • Author(s)
      Yasuhiro Ito
    • Journal Title

      Interface Oral Health Science 2007

      Pages: 265-266

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Detection of periodontopathic bacteria in periodontal pockets by nested polymerase chain reaction.2007

    • Author(s)
      Takuichi Sato
    • Journal Title

      Interface Oral Health Science 2007

      Pages: 267-268

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Profiling of bacterial flora in crevices around titanium orthodontic anchor plates2007

    • Author(s)
      Sato R
    • Journal Title

      Clin Oral Implant Res 18(1)

      Pages: 21-26

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Detection of periodontopathic bacteria in periodontal pockets by nested polymerase chain reaction2007

    • Author(s)
      Sato T
    • Journal Title

      International Congress Series (in press)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Comparison of age-dependent expression of aggrecan and ADAMTSs in mandibular condylar cartilage, tibial growth plate, and articular cartilage in rats2006

    • Author(s)
      Mitani H
    • Journal Title

      Histochem Cell Biol 126(3)

      Pages: 371-380

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Profiling of bacterial flora in crevices around titanium orthodontic anchor plates.2006

    • Author(s)
      Sato R
    • Journal Title

      Clin Oral Implant Res 17(in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] PCR for detection of mutans streptococci in human dental plaque2005

    • Author(s)
      Junko Matsuyama
    • Journal Title

      International Congress Series 1284

      Pages: 158-162

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Hydrogen sulfide-producing bacteria in tongue coating and their relationship with oral malodour2005

    • Author(s)
      Jumpei, Washio
    • Journal Title

      J Med Microbiol 54(9)

      Pages: 889-895

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Quantification and detection of bacteria from postoperative maxillary cyst by polymerase chain reaction2005

    • Author(s)
      Miyuki, Yamaura
    • Journal Title

      Oral Microbiol Immunol 20(6)

      Pages: 333-338

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] PCR for detection of mutans streptococci in human dental plaque.2005

    • Author(s)
      Junko Matsuyama
    • Journal Title

      International Congress Series 1284

      Pages: 158-162

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Hydrogen sulfide-producing bacteria in tongue coating and their relationship with oral malodour.2005

    • Author(s)
      Jumpei Washio
    • Journal Title

      J Med Microbiol 54(9)

      Pages: 889-895

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Quantification and detection of bacteria from postoperative maxillary cyst by polymerase chain reaction2005

    • Author(s)
      Miyuki Yamaura
    • Journal Title

      Oral Microbiol Immunol 20(6)

      Pages: 333-338

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] PCR for detection of mutans streptococci in human dental plaque.2005

    • Author(s)
      Matsuyama J
    • Journal Title

      International Congress Series 1284

      Pages: 158-162

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Hydrogen sulfide-producing bacteria in tongue coating and their relationship with oral malodour.2005

    • Author(s)
      Washio J
    • Journal Title

      J Med Microbiol 54(9)

      Pages: 889-895

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Quantification and detection of bacteria from postoperative maxillary cyst by polymerase chain reaction.2005

    • Author(s)
      Yamaura M
    • Journal Title

      Oral Microbiol Immunol 20(6)

      Pages: 333-338

    • Related Report
      2005 Annual Research Report
  • [Presentation] Profiling of dental plaque microflora of root caries lesions and the proleolytic activity of these bacteria2009

    • Author(s)
      Kazuhiro Hashimoto
    • Organizer
      第3回インターフェイス口腔健康科学国際シンポジウム
    • Place of Presentation
      仙台
    • Year and Date
      2009-01-16
    • Related Report
      2007 Annual Research Report
  • [Presentation] Profiling of dental plaque microflora of root-caries lesions2008

    • Author(s)
      Kazuhiro Hashimoto
    • Organizer
      第86回国際歯科研究学会
    • Place of Presentation
      トロント
    • Year and Date
      2008-07-04
    • Related Report
      2007 Annual Research Report
  • [Presentation] Host-DNA-fragments in periodontal pockets before and after periodontal treatment2008

    • Author(s)
      Boonyanit Thaweboon
    • Organizer
      第86回国際歯科研究学会
    • Place of Presentation
      トロント
    • Year and Date
      2008-07-03
    • Related Report
      2007 Annual Research Report
  • [Book] Interface Oral Health Science 20072007

    • Author(s)
      Yasuhiro, Ito
    • Publisher
      Microflora profiling of root canal utilizing real-time PCR and cloning-sequence analyses based on 16S rRNA genes-Differences between before and after root canal treatments-
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] Interface Oral Health Science 20072007

    • Author(s)
      Takuichi, Sato
    • Publisher
      Detection of periodontopathic bacteria in periodontal pockets by nested polymerase chain reaction
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary

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Published: 2005-04-01   Modified: 2016-04-21  

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