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Characterization of psychrophilic enzymes in ice algal species with a sequencing protocol of DNA from an individual algal colony

Research Project

Project/Area Number 17613005
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 極限環境生物学
Research InstitutionKanagawa University

Principal Investigator

SUZUKI Yoshihiro  Kanagawa University, Faculty of Science, Associate Professor (50301586)

Project Period (FY) 2005 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥3,670,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥270,000)
Fiscal Year 2007: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2006: ¥1,200,000 (Direct Cost: ¥1,200,000)
Fiscal Year 2005: ¥1,300,000 (Direct Cost: ¥1,300,000)
KeywordsIce lagae / rbcL / rbcS / RuBisCO / Cold Adaptation / psychrophilic
Research Abstract

Ice algal species can grow just at the freezing point of seawater at below 0℃ and are often fond in a colored ice in the polar sea. These ice algal species must maintain their photosynthetic activities to grow at the low temperatures. We found these ice algal communities, which were constructed by many diatom species, at Saromako Lagoon, Hokkaido Japan. They also could grow and maintain their photosynthesis at the low temperatures. To estimate the maintenance mechanisms of their photosynthesis, we focused on the key enzyme of photosynthesis, ribulose 1, 5-bisphosphate carboxylase/oxygenase (EC. 4.1.1.39, RuBisCO here after) and determined the primary structures. As most of the ice algal species can not be incubated for a long time, it is hard to get an enough biomass for extraction of DNA. Isolation and amplification method of DNA from a single colony of algae (Iwatani, et al. 2002) were applied for this study and successfully determined the DNA sequences of large and small subunit of some ice algal RuBisCO.
Although characteristic structures were not found in the small subunits, commonly different structures from those of the temperate diatom species were found in the large subunits of ice lagal RuBisCO, which constructed a loop between the a-helixes of #16 and #17. These structures of large subunits of ice algal RuBisCO could keep the flexibilities of these enzymes at low temperature

Report

(4 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • Research Products

    (6 results)

All 2008 2007

All Journal Article (2 results) Presentation (3 results) Book (1 results)

  • [Journal Article] Photosynthesis. Energy from the Sun : 14th2008

    • Author(s)
      John F. Allen、Elisabeth Gantt、John H. Golbeck, Ed. Springer
    • Journal Title

      International Congress on Photosynthesis 2008

      Pages: 1497-1500

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Photosynthetic responses of Japanese lily to fluctuated light condition on the understory of a temperate deciduous forest in early spring.2007

    • Author(s)
      M.Kono, A. Dedachi, Y. Suzuki
    • Journal Title

      Proc. 14th Intern. Photosyn. Cong. 24

      Pages: 1497-1500

    • Related Report
      2007 Annual Research Report
  • [Presentation] Phoyosynthetic responses of Japanese lily to light conditions on the understory of a temperate deciduous forest2007

    • Author(s)
      M.Kono, Y.Suzuki
    • Organizer
      14th International Congress of Photosynthesis
    • Place of Presentation
      Glasgow(Scotland,UK)
    • Year and Date
      2007-08-26
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Phoyosynthetic responses of Japanese lily to lighi conditions on the understory of a temperate deciduous forest.2007

    • Author(s)
      M. Kono, Y. Suzuki.
    • Organizer
      14th International Congress of Photosynthesis.
    • Place of Presentation
      Glasgow Scotland, UK
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Phoyosynthetic responses of Japanese lily to light conditions on the understory of a temperate deciduous forest.2007

    • Author(s)
      M. Kono, Y. Suzuki
    • Organizer
      14th International Congress of Photosynthesis,
    • Place of Presentation
      Glasgow (Scotland, UK)
    • Related Report
      2007 Annual Research Report
  • [Book] Energy from the Sun:14th International Congress on Photosynthesis2008

    • Author(s)
      John F.Allen、Elisabeth Gantt、John H.Golbeck編
    • Publisher
      Springer
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary

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Published: 2005-04-01   Modified: 2016-04-21  

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