• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Study on symbiotic complex in termite guts through single-cell genomics

Research Project

Project/Area Number 17H01447
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Biodiversity/Systematics
Research InstitutionInstitute of Physical and Chemical Research

Principal Investigator

Ohkuma Moriya  国立研究開発法人理化学研究所, バイオリソース研究センター, 室長 (10270597)

Project Period (FY) 2017-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥42,250,000 (Direct Cost: ¥32,500,000、Indirect Cost: ¥9,750,000)
Fiscal Year 2020: ¥10,270,000 (Direct Cost: ¥7,900,000、Indirect Cost: ¥2,370,000)
Fiscal Year 2019: ¥10,270,000 (Direct Cost: ¥7,900,000、Indirect Cost: ¥2,370,000)
Fiscal Year 2018: ¥10,270,000 (Direct Cost: ¥7,900,000、Indirect Cost: ¥2,370,000)
Fiscal Year 2017: ¥11,440,000 (Direct Cost: ¥8,800,000、Indirect Cost: ¥2,640,000)
Keywords共生 / 微生物群集 / ゲノム解析 / シングルセル / 微生物資源 / 微生物機能 / トランスクリプトーム / ゲノム / 難培養微生物 / シングルセル解析 / 微生物 / 生態学 / 進化
Outline of Final Research Achievements

Symbiotic microbial community in the gut of termites is complex but stable and conserved among individuals of a species. We performed single-cell genome and transcriptome analyses for the gut bacteria and protists, respectively, and revealed their functions and symbiotic roles. A new efficient technology for single-cell genome analyses with picolitre-scale genome amplification using double-layered microcapsules was successfully developed, which can be easily prepared but attain higher genome completeness.

Academic Significance and Societal Importance of the Research Achievements

生態系の複雑な微生物群集を構成する個々の微生物種の機能を明らかにすることは、微生物間の相互作用と生態系や群集の成立・維持機構の理解に極めて重要で、ひとつひとつ解明されていくことは学術上に大きな進展である。シングルセルゲノム解析の技術が高度化・効率化される意義も大きく、従来技術と相補的となる。これらの進展により、自然界の生態系の理解と保全、そして、微生物の複合系の効果的な制御や人為構築などの革新的な産業応用技術のための基盤がもたらされる。

Report

(5 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Annual Research Report
  • 2018 Annual Research Report
  • 2017 Annual Research Report
  • Research Products

    (84 results)

All 2021 2020 2019 2018 2017 Other

All Int'l Joint Research (4 results) Journal Article (40 results) (of which Int'l Joint Research: 13 results,  Peer Reviewed: 40 results,  Open Access: 15 results) Presentation (38 results) (of which Int'l Joint Research: 10 results,  Invited: 8 results) Remarks (2 results)

  • [Int'l Joint Research] Chulalongkorn University/Eastern Asia University(タイ)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] University of Sydney(オーストラリア)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] National University of Singapore(シンガポール)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] Southwest University(中国)

    • Related Report
      2020 Annual Research Report
  • [Journal Article] Conexivisphaera calida gen. nov., sp. nov., a thermophilic sulfur- and iron-reducing archaeon, and proposal of Conexivisphaeraceae fam. nov., Conexivisphaerales ord. nov., and Conexivisphaeria class. nov. in the phylum Thaumarchaeota2021

    • Author(s)
      Kato Shingo、Ohnishi Masafumi、Nagamori Mai、Yuki Masahiro、Takashina Tomonori、Ohkuma Moriya、Itoh Takashi
    • Journal Title

      International Journal of Systematic and Evolutionary Microbiology

      Volume: 71 Issue: 1 Pages: 004595-004595

    • DOI

      10.1099/ijsem.0.004595

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Division of functional roles for termite gut protists revealed by single-cell transcriptomes2020

    • Author(s)
      Nishimura Yuki、Otagiri Masato、Yuki Masahiro、Shimizu Michiru、Inoue Jun-ichi、Moriya Shigeharu、Ohkuma Moriya
    • Journal Title

      The ISME Journal

      Volume: 14 Issue: 10 Pages: 2449-2460

    • DOI

      10.1038/s41396-020-0698-z

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Parallel reductive genome evolution in Desulfovibrio ectosymbionts independently acquired by Trichonympha protists in the termite gut2020

    • Author(s)
      Takeuchi Mariko、Kuwahara Hirokazu、Murakami Takumi、Takahashi Kazuki、Kajitani Rei、Toyoda Atsushi、Itoh Takehiko、Ohkuma Moriya、Hongoh Yuichi
    • Journal Title

      The ISME Journal

      Volume: 14 Issue: 9 Pages: 2288-2301

    • DOI

      10.1038/s41396-020-0688-1

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Increased Mutation Rate Is Linked to Genome Reduction in Prokaryotes2020

    • Author(s)
      Bourguignon Thomas、Kinjo Yukihiro、Villa-Martin Paula、Coleman Nicholas V.、Tang Qian、Arab Daej A.、Wang Zongqing、Tokuda Gaku、Hongoh Yuichi、Ohkuma Moriya、Ho Simon Y.W.、Pigolotti Simone、Lo Nathan
    • Journal Title

      Current Biology

      Volume: 30 Issue: 19 Pages: 3848-3855.e4

    • DOI

      10.1016/j.cub.2020.07.034

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Lactococcus insecticola sp. nov. and Lactococcus hodotermopsidis sp. nov., isolated from the gut of the wood-feeding lower termite Hodotermopsis sjostedti2020

    • Author(s)
      S. Noda, F. Koyama, C. Aihara, N. Ikeyama, M. Yuki, and M. Ohkuma, M. Sakamoto
    • Journal Title

      Int. J. Syst. Evol. Microbiol

      Volume: 70 Issue: 8 Pages: 4514-4522

    • DOI

      10.1099/ijsem.0.004309

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Actinomadura decatromicini sp. nov., isolated from mountain soil in Thailand2020

    • Author(s)
      Songsumanus Apakorn、Kuncharoen Nattakorn、Kudo Takuji、Yuki Masahiro、Ohkuma Moriya、Igarashi Yasuhiro、Tanasupawat Somboon
    • Journal Title

      The Journal of Antibiotics

      Volume: 74 Issue: 1 Pages: 51-58

    • DOI

      10.1038/s41429-020-0353-y

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Nocardia aurantiaca sp. nov., isolated from soil in Thailand2020

    • Author(s)
      Kanchanasin Pawina、Yuki Masahiro、Kudo Takuji、Ohkuma Moriya、Phongsopitanun Wongsakorn、Tanasupawat Somboon
    • Journal Title

      International Journal of Systematic and Evolutionary Microbiology

      Volume: 70 Issue: 10 Pages: 5432-5438

    • DOI

      10.1099/ijsem.0.004432

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Streptomyces mimosae sp. nov., an endophytic actinomycete isolated from the root of Mimosa pudica in Thailand2020

    • Author(s)
      Klykleung Nattaporn、Yuki Masahiro、Kudo Takuji、Ohkuma Moriya、Phongsopitanun Wongsakorn、Inahashi Yuki、Matsumoto Atsuko、Tanasupawat Somboon
    • Journal Title

      International Journal of Systematic and Evolutionary Microbiology

      Volume: 70 Issue: 5 Pages: 3316-3322

    • DOI

      10.1099/ijsem.0.004170

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Cutibacterium modestum sp. nov., isolated from meibum of human meibomian glands, and emended descriptions of Cutibacterium granulosum and Cutibacterium namnetense.2020

    • Author(s)
      Dekio I, Sakamoto M, Suzuki T, Yuki M, Kinoshita S, Murakami Y, Ohkuma M.
    • Journal Title

      Int J Syst Evol Microbiol

      Volume: 70 Issue: 4 Pages: 2457-2462

    • DOI

      10.1099/ijsem.0.004058

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Streptomyces bauhiniae sp. nov., isolated from tree bark of Bauhinia variegata Linn. in Thailand2020

    • Author(s)
      Kanchanasin Pawina、Yuki Masahiro、Kudo Takuji、Ohkuma Moriya、Kuncharoen Nattakorn、Phongsopitanun Wongsakorn、Tanasupawat Somboon
    • Journal Title

      International Journal of Systematic and Evolutionary Microbiology

      Volume: 70 Issue: 1 Pages: 228-233

    • DOI

      10.1099/ijsem.0.003743

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Microbispora catharanthi sp. nov., a novel endophytic actinomycete isolated from the root of Catharanthus roseus2020

    • Author(s)
      Klykleung Nattaporn、Yuki Masahiro、Kudo Takuji、Ohkuma Moriya、Phongsopitanun Wongsakorn、Pittayakhajonwut Pattama、Tanasupawat Somboon
    • Journal Title

      International Journal of Systematic and Evolutionary Microbiology

      Volume: 70 Issue: 2 Pages: 964-970

    • DOI

      10.1099/ijsem.0.003858

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Thermaurantimonas aggregans gen. nov., sp. nov., a moderately thermophilic heterotrophic aggregating bacterium isolated from microbial mats at a terrestrial hot spring2020

    • Author(s)
      Iino Takao、Kawai Shigeru、Yuki Masahiro、Dekio Itaru、Ohkuma Moriya、Haruta Shin
    • Journal Title

      International Journal of Systematic and Evolutionary Microbiology

      Volume: 70 Issue: 2 Pages: 1117-1121

    • DOI

      10.1099/ijsem.0.003888

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Micromonospora musae sp. nov., an endophytic actinomycete isolated from roots of Musa species2019

    • Author(s)
      Kuncharoen Nattakorn、Kudo Takuji、Yuki Masahiro、Okuma Moriya、Booncharoen Auttaporn、Tanasupawat Somboon
    • Journal Title

      Systematic and Applied Microbiology

      Volume: 42 Issue: 6 Pages: 126020-126020

    • DOI

      10.1016/j.syapm.2019.126020

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Nonomuraea phyllanthi sp. nov., an endophytic actinomycete isolated from the leaf of Phyllanthus amarus2019

    • Author(s)
      Klykleung Nattaporn、Yuki Masahiro、Kudo Takuji、Ohkuma Moriya、Phongsopitanun Wongsakorn、Pittayakhajonwut Pattama、Tanasupawat Somboon
    • Journal Title

      Archives of Microbiology

      Volume: 202 Issue: 1 Pages: 55-61

    • DOI

      10.1007/s00203-019-01717-w

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Isolation and characterization of a thermophilic sulfur- and iron-reducing thaumarchaeote from a terrestrial acidic hot spring2019

    • Author(s)
      Kato Shingo、Itoh Takashi、Yuki Masahiro、Nagamori Mai、Ohnishi Masafumi、Uematsu Katsuyuki、Suzuki Katsuhiko、Takashina Tomonori、Ohkuma Moriya
    • Journal Title

      The ISME Journal

      Volume: 13 Issue: 10 Pages: 2465-2474

    • DOI

      10.1038/s41396-019-0447-3

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Comparative genomics of Parolsenella catena and Libanicoccus massiliensis: Reclassification of Libanicoccus massiliensis as Parolsenella massiliensis comb. nov.2019

    • Author(s)
      Sakamoto Mitsuo、Ikeyama Nao、Murakami Takumi、Mori Hiroshi、Yuki Masahiro、Ohkuma Moriya
    • Journal Title

      International Journal of Systematic and Evolutionary Microbiology

      Volume: 69 Issue: 4 Pages: 1123-1129

    • DOI

      10.1099/ijsem.0.003283

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Horizontally-acquired genetic elements in the mitochondrial genome of a centrohelid Marophrys sp. SRT127.2019

    • Author(s)
      Yuki Nishimura, Takashi Shiratori, Ken-ichiro Ishida, Tetsuo Hashimoto, Moriya Ohkuma, Yuji Inagaki
    • Journal Title

      Scientific Reports

      Volume: 9 Issue: 1 Pages: 4850-4850

    • DOI

      10.1038/s41598-019-41238-6

    • NAID

      120007128095

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] マイクロビオームの一細胞解析技術の現状(The current state of single-cell analysis for microbiome)2019

    • Author(s)
      雪 真弘、大熊盛也
    • Journal Title

      実験医学(Experimental Medicine)

      Volume: 37 Pages: 186-191

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Draft Genome Sequence of Lactococcus sp. Strain NtB2, Isolated from the Gut of the Termite Nasutitermes takasagoensis2018

    • Author(s)
      S. Noda, C. Aihara, M. Yuki, and M. Ohkuma
    • Journal Title

      Genome Announc

      Volume: 6 Issue: 24

    • DOI

      10.1128/genomea.00445-18

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Lactococcus termiticola sp. nov., isolated from the gut of higher termite Nasutitermes takasagoensis2018

    • Author(s)
      S. Noda, M. Sakamoto, C. Aihara, M. Yuki, M. Katsuhara, and M. Ohkuma
    • Journal Title

      IJSEM

      Volume: 68 Issue: 12 Pages: 3832-3836

    • DOI

      10.1099/ijsem.0.003068

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Genome analyses of uncultured TG2/ZB3 bacteria in ‘Margulisbacteria’ specifically attached to ectosymbiotic spirochetes of protists in the termite gut2018

    • Author(s)
      Utami Yuniar Devi、Kuwahara Hirokazu、Igai Katsura、Murakami Takumi、Sugaya Kaito、Morikawa Takahiro、Nagura Yuichi、Yuki Masahiro、Deevong Pinsurang、Inoue Tetsushi、Kihara Kumiko、Lo Nathan、Yamada Akinori、Ohkuma Moriya、Hongoh Yuichi
    • Journal Title

      The ISME Journal

      Volume: 13 Issue: 2 Pages: 455-467

    • DOI

      10.1038/s41396-018-0297-4

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Ectosymbiotic bacterial microbiota densely colonize the surface of thelastomatid nematodes in the gut of the wood-feeding cockroach Panesthia angustipennis2018

    • Author(s)
      Murakami Takumi、Onouchi Shu、Igai Katsura、Ohkuma Moriya、Hongoh Yuichi
    • Journal Title

      FEMS Microbiology Ecology

      Volume: 95 Issue: 2

    • DOI

      10.1093/femsec/fiy238

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Tempo and Mode of Genome Evolution in the Budding Yeast Subphylum2018

    • Author(s)
      Shen Xing-Xing et al.
    • Journal Title

      Cell

      Volume: 175 Issue: 6 Pages: 1533-1545.e20

    • DOI

      10.1016/j.cell.2018.10.023

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Novel Self-Transmissible and Broad-Host-Range Plasmids Exogenously Captured From Anaerobic Granules or Cow Manure2018

    • Author(s)
      Yanagiya Kosuke、Maejima Yoshiaki、Nakata Hiroki、Tokuda Maho、Moriuchi Ryota、Dohra Hideo、Inoue Kengo、Ohkuma Moriya、Kimbara Kazuhide、Shintani Masaki
    • Journal Title

      Frontiers in Microbiology

      Volume: 9 Pages: 2602-2602

    • DOI

      10.3389/fmicb.2018.02602

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Lactobacillus paragasseri sp. nov., a sister taxon of Lactobacillus gasseri, based on whole-genome sequence analyses2018

    • Author(s)
      Tanizawa Y, Tada I, Kobayashi H, Endo A, Maeno S, Toyoda A, Arita M, Nakamura Y, Sakamoto M, Ohkuma M, Tohno M
    • Journal Title

      Int J Syst Evol Microbiol

      Volume: 68 Issue: 11 Pages: 3512-3517

    • DOI

      10.1099/ijsem.0.003020

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Complete Genome Sequence of Ferriphaselus amnicola Strain OYT1, a Neutrophilic, Stalk-Forming, Iron-Oxidizing Bacterium2018

    • Author(s)
      Kato Shingo、Yuki Masahiro、Itoh Takashi、Ohkuma Moriya
    • Journal Title

      Microbiology Resource Announcements

      Volume: 7 Issue: 12

    • DOI

      10.1128/mra.00911-18

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Draft Genome Sequence of Faecalimonas umbilicata JCM 30896T, an Acetate-Producing Bacterium Isolated from Human Feces2018

    • Author(s)
      Sakamoto Mitsuo、Ikeyama Nao、Yuki Masahiro、Ohkuma Moriya
    • Journal Title

      Microbiology Resource Announcements

      Volume: 7 Issue: 9

    • DOI

      10.1128/mra.01091-18

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Parallel and Gradual Genome Erosion in the Blattabacterium Endosymbionts of Mastotermes darwiniensis and Cryptocercus Wood Roaches2018

    • Author(s)
      Kinjo Yukihiro、Bourguignon Thomas、Tong Kwei Jun、Kuwahara Hirokazu、Lim Sang Jin、Yoon Kwang Bae、Shigenobu Shuji、Park Yung Chul、Nalepa Christine A、Hongoh Yuichi、Ohkuma Moriya、Lo Nathan、Tokuda Gaku
    • Journal Title

      Genome Biology and Evolution

      Volume: 10 Issue: 6 Pages: 1622-1630

    • DOI

      10.1093/gbe/evy110

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Draft Genome Sequence of Lawsonibacter asaccharolyticus JCM 32166 T , a Butyrate-Producing Bacterium, Isolated from Human Feces2018

    • Author(s)
      Sakamoto Mitsuo、Ikeyama Nao、Yuki Masahiro、Ohkuma Moriya
    • Journal Title

      Genome Announcements

      Volume: 6 Issue: 25

    • DOI

      10.1128/genomea.00563-18

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Lactobacillus metriopterae sp. nov., a novel lactic acid bacterium isolated from the gut of grasshopper Metrioptera engelhardti2018

    • Author(s)
      Chiba Makoto、Itabashi Takanori、Hirai Koujiro、Sakamoto Mitsuo、Ohkuma Moriya、Ishige Taichiro、Kawasaki Shinji
    • Journal Title

      International Journal of Systematic and Evolutionary Microbiology

      Volume: 68 Issue: 5 Pages: 1484-1489

    • DOI

      10.1099/ijsem.0.002694

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Lactococcus reticulitermitis sp. nov., isolated from the gut of the subterranean termite Reticulitermes speratus2018

    • Author(s)
      Yuki Masahiro、Sakamoto Mitsuo、Nishimura Yuki、Ohkuma Moriya
    • Journal Title

      International Journal of Systematic and Evolutionary Microbiology

      Volume: 68 Issue: 2 Pages: 596-601

    • DOI

      10.1099/ijsem.0.002549

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Host-Symbiont Cospeciation of Termite-Gut Cellulolytic Protists of the Genera <i>Teranympha</i> and <i>Eucomonympha</i> and their <i>Treponema</i> Endosymbionts2018

    • Author(s)
      Noda Satoko、Shimizu Daichi、Yuki Masahiro、Kitade Osamu、Ohkuma Moriya
    • Journal Title

      Microbes and Environments

      Volume: 33 Issue: 1 Pages: 26-33

    • DOI

      10.1264/jsme2.ME17096

    • NAID

      130006581788

    • ISSN
      1342-6311, 1347-4405
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Phylogenetic Diversity and Single-Cell Genome Analysis of “<i>Melainabacteria</i>”, a Non-Photosynthetic Cyanobacterial Group, in the Termite Gut2018

    • Author(s)
      Utami Yuniar Devi、Kuwahara Hirokazu、Murakami Takumi、Morikawa Takahiro、Sugaya Kaito、Kihara Kumiko、Yuki Masahiro、Lo Nathan、Deevong Pinsurang、Hasin Sasitorn、Boonriam Warin、Inoue Tetsushi、Yamada Akinori、Ohkuma Moriya、Hongoh Yuichi
    • Journal Title

      Microbes and Environments

      Volume: 33 Issue: 1 Pages: 50-57

    • DOI

      10.1264/jsme2.ME17137

    • NAID

      130006581744

    • ISSN
      1342-6311, 1347-4405
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Multiple losses of photosynthesis and convergent reductive genome evolution in the colourless green algae Prototheca2018

    • Author(s)
      Shigekatsu Suzuki, Rikiya Endoh, Ri-ichiroh Manabe, Moriya Ohkuma, Yoshihisa Hirakawa
    • Journal Title

      Scientific Reports

      Volume: 8 Issue: 1 Pages: 940-940

    • DOI

      10.1038/s41598-017-18378-8

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Draft Genome Sequence of Lactococcus sp. Strain Rs-Y01, Isolated from the Gut of the Lower Termite Reticulitermes speratus2017

    • Author(s)
      Yuki Masahiro、Sakamoto Mitsuo、Kuwahara Hirokazu、Hongoh Yuichi、Ohkuma Moriya
    • Journal Title

      Genome Announcements

      Volume: 5 Issue: 38

    • DOI

      10.1128/genomea.00999-17

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Pseudonocardia thailandensis sp. nov., an actinomycete isolated from a subterranean termite nest2017

    • Author(s)
      Sujarit Kanaporn、Sujada Nikhom、Kudo Takuji、Ohkuma Moriya、Pathom-Aree Wasu、Lumyong Saisamorn
    • Journal Title

      International Journal of Systematic and Evolutionary Microbiology

      Volume: 67 Issue: 8 Pages: 2773-2778

    • DOI

      10.1099/ijsem.0.002017

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Screening and evolution of a novel protist xylose isomerase from the termite Reticulitermes speratus for efficient xylose fermentation in Saccharomyces cerevisiae2017

    • Author(s)
      Katahira Satoshi、Muramoto Nobuhiko、Moriya Shigeharu、Nagura Risa、Tada Nobuki、Yasutani Noriko、Ohkuma Moriya、Onishi Toru、Tokuhiro Kenro
    • Journal Title

      Biotechnology for Biofuels

      Volume: 10 Issue: 1 Pages: 203-203

    • DOI

      10.1186/s13068-017-0890-1

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Discovery of ectosymbiotic Endomicrobium lineages associated with protists in the gut of stolotermitid termites2017

    • Author(s)
      Izawa Kazuki、Kuwahara Hirokazu、Sugaya Kaito、Lo Nathan、Ohkuma Moriya、Hongoh Yuichi
    • Journal Title

      Environmental Microbiology Reports

      Volume: 9 Issue: 4 Pages: 411-418

    • DOI

      10.1111/1758-2229.12549

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Different transferability of incompatibility (Inc) P-7 plasmid pCAR1 and IncP-1 plasmid pBP136 in stirring liquid conditions2017

    • Author(s)
      Nakazawa Shunsuke、Haramiishi Akira、Fukuda Kohei、Kanayama Yukie、Watanabe Toshinori、Yuki Masahiro、Ohkuma Moriya、Takeda Kazuhiro、Kimbara Kazuhide、Shintani Masaki
    • Journal Title

      PLOS ONE

      Volume: 12 Issue: 10 Pages: e0186248-e0186248

    • DOI

      10.1371/journal.pone.0186248

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Draft Genome Sequence of Tepidibacter mesophilus Strain JCM 16806T Isolated from Soil Polluted by Crude Oil in China2017

    • Author(s)
      Lee Chol Gyu、Yuki Masahiro、Iida Toshiya、Nakaho Kazuhiro、Ohkuma Moriya
    • Journal Title

      Genome Announcements

      Volume: 5 Issue: 47

    • DOI

      10.1128/genomea.01308-17

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] シロアリ腸内原生生物共生Endomicrobium属細菌の完全長ゲノム比較で見出された基幹代謝系の改変2021

    • Author(s)
      吉岡拓哉, 伊澤和輝, 桑原宏和, 竹内真理子, 加藤大貴, 澤村岩風, 大熊盛也, 本郷裕一
    • Organizer
      第15回日本ゲノム微生物学会年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] シロアリ腸内原生生物に細胞内共生するClostridiales目細菌の比較ゲノム解析2021

    • Author(s)
      高橋一樹, 桑原宏和, 堀川雄太郎, 伊澤和輝, 雪真弘, 大熊盛也, 本郷裕一
    • Organizer
      第15回日本ゲノム微生物学会年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] シロアリ腸内原生生物Mixotricha paradoxa細胞表面共生Bacteroidales目細菌のゲノム解析2021

    • Author(s)
      傅 潔洋、桑原宏和、木原久美子,大熊盛也、本郷裕一
    • Organizer
      第15回日本ゲノム微生物学会年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] シロアリ腸内原生生物運動共生スピロヘータのゲノム解析2021

    • Author(s)
      Yiting Liu, 桑原宏和, 間渕貴子,木原久美子,大熊盛也,本郷裕一
    • Organizer
      第15回日本ゲノム微生物学会年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] コレステロール低下作用を有する孟宗竹リグノヘミセルロースの調製と作用機構の解析2021

    • Author(s)
      王 建鵬、平本 茂、盧 超、池山 菜緒、雪 真弘、大熊 盛也、坂本 光央、椎葉 究
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 同一不和合性群に属する塩基組成の異なるプラスミドの宿主域比較2021

    • Author(s)
      德田 真穂、鈴木 治夫、雪 真弘、大熊 盛也、金原 和秀、新谷 政己
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] IncPromA群に属するプラスミドの異なる温度条件下での挙動の比較2021

    • Author(s)
      千葉 怜碧、德田 真穂、雪 真弘、大熊 盛也、金原 和秀、新谷 政己
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Plasmids with different base composition showed different host ranges2020

    • Author(s)
      Maho Tokuda, Haruo Suzuki, Masahiro Yuki, Moriya Ohkuma, Kazuhide Kimbara, Masaki Shintani
    • Organizer
      FEMS ONLINE CONFERENCE ON MICROBIOLOGY 2020
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 同一不和合性群に属する塩基組成の異なるプラスミドの宿主域比較2020

    • Author(s)
      德田真穂,鈴木治夫,雪真弘,大熊盛也,水口千穂,野尻秀昭,金原和秀,新谷政己
    • Organizer
      日本進化学会第22回オンライン大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 不和合性群IncPromA群に属するプラスミドの異なる温度条件下における挙動の比較2020

    • Author(s)
      千葉怜碧,德田真穂,雪真弘,大熊盛也,金原和秀,新谷政己
    • Organizer
      日本進化学会第22回オンライン大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Single-cell genomics of termite-gut symbionts.2019

    • Author(s)
      Moriya Ohkuma
    • Organizer
      Okinawa Institute of Science and Technology Graduate University (OIST) Mini-Symposium “Ecology and Evolution of Termite Gut Microbes”
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Cultured microbial resources and single-cell genomics of yet-uncultured for integrated symbiology.2019

    • Author(s)
      Moriya Ohkuma
    • Organizer
      RIKEN-Japan Society of Symbiosis Joint Symposium "Toward applied symbiosis biology"
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Sutterellaceae 科に属する新菌種2019

    • Author(s)
      坂本光央、池山菜緒、國弘忠生、飯野隆夫、雪真弘、大熊盛也
    • Organizer
      第93回日本細菌学会総会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Recent Activities of RIKEN BRC-JCM2019

    • Author(s)
      Moriya Ohkuma
    • Organizer
      Asian Network of Research Resource Centers, the 11th International Meeting
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Spirotrichonymphea 綱原生生物の分子系統解析2019

    • Author(s)
      野田 悟子、北出 理、大熊盛也
    • Organizer
      第52回日本原生生物学会大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] ヤマトシロアリ腸内オキシモナス群集におけるエコタイプ仮説の検証2019

    • Author(s)
      猪飼 桂、北出 理、傅 潔洋、大熊 盛也、本郷 裕一
    • Organizer
      第52回日本原生生物学会大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 難培養微生物のシングルセルゲノム解析2019

    • Author(s)
      雪 真弘、大熊 盛也
    • Organizer
      第52回日本原生生物学会大会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] シロアリ腸内原生生物と細胞内・表面共生細菌間の相互作用2019

    • Author(s)
      雪 真弘、大熊 盛也
    • Organizer
      日本微生物生態学会第33回大会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] シロアリ腸内から分離された新規 Paraburkholderia 属細菌 2 種の比較解析2019

    • Author(s)
      雪 真弘, 高島 昌子, 清水 美智留, 加藤 真悟, 大熊 盛也
    • Organizer
      日本微生物生態学会第33回大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] ヤマトシロアリ腸内に共生する原生生物の多様性と機能の解析2019

    • Author(s)
      西村 祐貴, 佐藤 渚, 大熊 盛也
    • Organizer
      日本微生物生態学会第33回大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 原生生物細胞内共生 Endomicrobium 属細菌の宿主環境への適応進化による基幹代謝系の改変2019

    • Author(s)
      伊澤 和輝 , 雪 真弘, 吉岡 拓哉, 桑原 宏和, 大熊 盛也, 本郷 裕一
    • Organizer
      日本微生物生態学会第33回大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] シロアリ腸内から分離された Burkholderia sp. 2 種の比較ゲノム解析2019

    • Author(s)
      雪 真弘, 高島 昌子, 清水 美智留, 加藤 真悟, 大熊 盛也
    • Organizer
      日本微生物生資源学会第33回大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 難培養性原生生物におけるシングルセルトランスクリプトーム: シロアリ共生原生生物をモデルとして2019

    • Author(s)
      西村 祐貴、小田切 正人、雪 真弘、守屋 繁春、大熊 盛也
    • Organizer
      第13回日本ゲノム微生物学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] シロアリ腸内に共生する原生生物のTreponema 属細胞内共生細菌の比較ゲノム解析2018

    • Author(s)
      Masahiro Yuki, Hirokazu Kuwahara, Satoko Noda, Yuichi Hongoh, Moriya Ohkuma
    • Organizer
      日本微生物生態学会第32回大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 高等シロアリNasutitermes takasagoensis の腸内から単離したLactococcus 属の新種 (L. termiticola)2018

    • Author(s)
      Chihiro Aihara, Megumi Katsuhara, Mitsuo Sakamoto, Masahiro Yuki, Moriya Ohkuma, Satoko Noda
    • Organizer
      日本微生物生態学会第32回大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] シングルセルに基づくシロアリ腸内原生生物のトランスクリプトーム解析2018

    • Author(s)
      Yuki Nishimura, Masato Otagiri, Masahiro Yuki, , Michiru Shimizu, Nagisa Sato, Shigeharu Moriya, Moriya Ohkuma
    • Organizer
      日本微生物生態学会第32回大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Genome analyses of uncultured ZB3/TG2 bacteria (“Margulisbacteria”) attached to ectosymbiotic spirochetes of protist cells in the termite gut2018

    • Author(s)
      Yuniar Devi Utami, Masahiro Yuki, Akinori Yamada, Moriya Ohkuma, Yuichi Hongoh
    • Organizer
      17th International Symposium on Microbial Ecology (ISME17)
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Insight into adaptive genome evolution: comparative genomics of Desulfovibrio symbionts of termite-gut protists and a free-living relative2018

    • Author(s)
      Mariko Kasuya, Hirokazu Kuwahara, Takumi Murakami, Atsushi Toyoda, Moriya Ohkuma, Yuichi Hongoh
    • Organizer
      17th International Symposium on Microbial Ecology (ISME17)
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Genome analysis of a methanogenic endosymbiont of a novel Mixotricha protist species in the termite gut2018

    • Author(s)
      Miho Sakai, Katsura Igai, Takako Mabuchi, Hirokazu Kuwahara, Nathan Lo, Moriya Ohkuma, Kumiko Kihara, Yuichi Hongoh
    • Organizer
      17th International Symposium on Microbial Ecology (ISME17)
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Single cell transcriptome analyses of symbiotic protists in wood-feeding termites2018

    • Author(s)
      Yuki Nishimura, Masato Otagiri, Masahiro Yuki, Michiru Shimiu, Nagisa Sato, Shigeharu Moriya, Moriya Ohkuma
    • Organizer
      17th International Symposium on Microbial Ecology (ISME17)
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] True Diversity and Phylogenetic Relationships of Oxymonad Protists in the Gut of the Termite Reticulitermes speratus2018

    • Author(s)
      Katsura Igai, Osamu Kitade, Moriya Ohkuma,, hYuichi Hongoh
    • Organizer
      The 5th joint meeting of the Phycological Society of America & International Society of Protistologists
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Next generation technology for integrated symbiology and microbial resources of symbionts2018

    • Author(s)
      Moriya Okuma
    • Organizer
      RIKEN International Symposium "Frontiers in Integrated Symbiology"
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] シングルセルゲノム解析によるシロアリ腸内原生生物と細胞内・表面共生細菌の共生関係の解明2017

    • Author(s)
      雪 真弘、大熊盛也
    • Organizer
      第50回日本原生生物学会大会第1回日本共生生物学会大会合同大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] シングルセルトランスクリプトームによりシロアリ腸内原生生物の一種がキチン分解を通して効率的な窒素の利用に資することが示された2017

    • Author(s)
      西村祐貴、小田切正人、雪 真弘、井上潤一、守屋 繁春、大熊 盛也
    • Organizer
      第50回日本原生生物学会大会第1回日本共生生物学会大会合同大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Activity of RIKEN BRC JCM to contribute microbial researches in Asia2017

    • Author(s)
      Moriya Ohkuma
    • Organizer
      Joint Meeting of the 9th ANRRC International Meeting and International Microbiome Workshop
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] シングルセルトランスクリプトームに基づくイエシロアリ共生原生生物の機能解明2017

    • Author(s)
      西村祐貴、小田切正人、雪 真弘、井上潤一、守屋 繁春、大熊 盛也
    • Organizer
      環境微生物系学会合同大会2017
    • Related Report
      2017 Annual Research Report
  • [Presentation] 環境微生物研究に貢献するカルチャーコレクションのあり方2017

    • Author(s)
      大熊盛也
    • Organizer
      環境微生物系学会合同大会2017
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] シングルセルゲノム解析から推定された原生生物細胞表面共生細菌のファージ感染耐性機構2017

    • Author(s)
      雪 真弘、桑原宏和、河合幹彦、伊澤和輝、Starns David、清水、美智留、野田悟子、本郷裕一、大熊盛也
    • Organizer
      環境微生物系学会合同大会2017
    • Related Report
      2017 Annual Research Report
  • [Remarks] 理研ニュース研究最前線2018年4月号pp6-9 腸内細菌で健康や環境に貢献する

    • URL

      http://www.riken.jp/~/media/riken/pr/publications/news/2018/rn201804.pdf

    • Related Report
      2018 Annual Research Report
  • [Remarks] 理研ニュース2018年4月号研究最前線「腸内細菌で健康や環境に貢献する」

    • URL

      http://www.riken.jp/~/media/riken/pr/publications/news/2018/rn201804.pdf

    • Related Report
      2017 Annual Research Report

URL: 

Published: 2017-04-28   Modified: 2022-01-27  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi