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Long non-coding RNA as an epigenetic modulator in cancer cells

Research Project

Project/Area Number 17H03582
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Tumor biology
Research InstitutionNagoya University

Principal Investigator

Kondo Yutaka  名古屋大学, 医学系研究科, 教授 (00419897)

Project Period (FY) 2017-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥18,070,000 (Direct Cost: ¥13,900,000、Indirect Cost: ¥4,170,000)
Fiscal Year 2019: ¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2018: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2017: ¥8,580,000 (Direct Cost: ¥6,600,000、Indirect Cost: ¥1,980,000)
Keywords非翻訳RNA / エピゲノム / 膠芽腫 / ドラッグデリバリーシステム / エピジェネティクス / 長鎖非翻訳RNA / がん / TUG1 / メチル化
Outline of Final Research Achievements

We identified that TUG1 (taurine upregulated gene 1) is an indispensable long noncoding RNA (lncRNA) to regulate intrinsic DNA replication stress (RS)/ DNA repair in cancer cells. When replication was disrupted, the ATR signaling pathway was activated and immediately induced transcription of TUG1. Mechanistically, TUG1 promoted recruitment of replication protein A (RPA) to the replication forks. Our data reveal a novel spatiotemporal role of TUG1 as an indispensable molecule to relieve RS in cancer cells and provide a strong rationale for targeting TUG1 as a specific and potent therapeutic approach for cancer treatment.

Academic Significance and Societal Importance of the Research Achievements

難治性腫瘍は根治がほぼ期待できないため患者本人や家族の苦痛、そして社会的損失が計り知れない。今回、TUG1に対して核酸医薬の開発を進めるための基盤的データが構築てきた。TUG1に対する核酸医薬開発は、独自の分子基盤に基づいた治療薬が期待でき、実用化ができれば国内のみならず他国の開発と比しても極めて競争力が高いと考える。また既存のがん治療法とは作用機序が異なることから他の既存治療法を強化する新たな治療戦略の開発にもつながる。

Report

(4 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Annual Research Report
  • 2017 Annual Research Report
  • Research Products

    (45 results)

All 2020 2019 2018 2017

All Journal Article (13 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 11 results,  Open Access: 9 results) Presentation (23 results) (of which Int'l Joint Research: 13 results,  Invited: 7 results) Book (9 results)

  • [Journal Article] H3F3A mutant allele specific imbalance in an aggressive subtype of diffuse midline glioma, H3 K27M-mutant.2020

    • Author(s)
      Maeda S, Ohka F, Okuno Y, Aoki K, Motomura K, Takeuchi K, Kusakari H, Yanagisawa N, Sato S, Yamaguchi J, Tanahashi K, Hirano M, Kato A, Shimizu H, Kitano Y, Yamazaki S, Yamashita S, Takeshima H, Shinjo K, Kondo Y, Wakabayashi T, Natsume A.
    • Journal Title

      Acta Neuropathologica Communications

      Volume: 8 Issue: 1 Pages: 8-19

    • DOI

      10.1186/s40478-020-0882-4

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] DNA methylation inhibitor attenuates polyglutamine-induced neurodegeneration by regulating Hes52019

    • Author(s)
      Kondo N, Tohnai G, Sahashi K, Iida M, Kataoka M, Nakatsuji H, Tsutsumi Y, Hashizume A, Adachi H, Koike H, Shinjo K, Kondo Y, Sobue G, Katsuno M.
    • Journal Title

      EMBO Mol Med

      Volume: none Issue: 5

    • DOI

      10.15252/emmm.201708547

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Genome-Epigenome-Senescence: Is TET1 a Caretaker of p53-Injured Lung Cancer Cells?2019

    • Author(s)
      Kondo Y.
    • Journal Title

      Cancer Research

      Volume: 79 Issue: 8 Pages: 1751-1752

    • DOI

      10.1158/0008-5472.can-19-0645

    • NAID

      120006711430

    • Related Report
      2019 Annual Research Report
  • [Journal Article] In vivo rendezvous of small nucleic acid drugs with charge-matched block catiomers to target cancers2019

    • Author(s)
      Watanabe Sumiyo、Hayashi Kotaro、Toh Kazuko、Kim Hyun Jin、Liu Xueying、Chaya Hiroyuki、Fukushima Shigeto、Katsushima Keisuke、Kondo Yutaka、Uchida Satoshi、Ogura Satomi、Nomoto Takahiro、et al.
    • Journal Title

      Nature Communications

      Volume: 10 Issue: 1 Pages: 1894-1894

    • DOI

      10.1038/s41467-019-09856-w

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Pathogenic Epigenetic Consequences of Genetic Alterations in IDH-Wild-Type Diffuse Astrocytic Gliomas2019

    • Author(s)
      Ohka Fumiharu、Shinjo Keiko、Deguchi Shoichi、Matsui Yusuke et al.
    • Journal Title

      Cancer Research

      Volume: 79 Issue: 19 Pages: 4814-4827

    • DOI

      10.1158/0008-5472.can-19-1272

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] エピゲノム標的薬2019

    • Author(s)
      新城恵子、近藤 豊.
    • Journal Title

      進化するがん創薬-がん科学と薬物療法の最前線

      Volume: - Pages: 224-233

    • Related Report
      2019 Annual Research Report
  • [Journal Article] Identification of a chemical modulator of EZH2-mediated silencing by cell-based high-throughput screening assay2019

    • Author(s)
      Murashima Akihiro、Shinjo Keiko、Katsushima Keisuke、Onuki Tetsuo、Kondoh Yasumitsu、Osada Hiroyuki、Kagaya Noritaka、Shin-ya Kazuo、Kimura Hiroshi、Yoshida Minoru、Murakami Shingo、Kondo Yutaka.
    • Journal Title

      The Journal of Biochemistry

      Volume: - Issue: 1 Pages: 1-10

    • DOI

      10.1093/jb/mvz007

    • NAID

      40021952184

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] ZNF671 DNA methylation as a molecular predictor for the early recurrence of serous ovarian cancer2019

    • Author(s)
      Mase Shoko、Shinjo Keiko、Totani Haruhito、Katsushima Keisuke、Arakawa Atsushi、Takahashi Satoru、Lai Hung-Cheng、Lin Ru-Inn、Chan Michael W. Y.、Sugiura-Ogasawara Mayumi、Kondo Yutaka
    • Journal Title

      Cancer Science

      Volume: 110 Issue: 3 Pages: 1105-1116

    • DOI

      10.1111/cas.13936

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A novel high-sensitivity assay to detect a small fraction of mutant IDH1 using droplet digital PCR2018

    • Author(s)
      Hirano Masaki、Ohka Fumiharu、Maeda Sachi、Chalise Lushun、Yamamichi Akane、Aoki Kosuke、Kato Akira、Tanahashi Kuniaki、Motomura Kazuya、Nishimura Yusuke、Hara Masahito、Shinjo Keiko、Kondo Yutaka、Wakabayashi Toshihiko、Natsume Atsushi
    • Journal Title

      Brain Tumor Pathology

      Volume: - Issue: 2 Pages: 97-105

    • DOI

      10.1007/s10014-018-0310-7

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Oncogenic effects of evolutionarily conserved noncoding RNA ECONEXIN on gliomagenesis2017

    • Author(s)
      Deguchi S、Katsushima K、Hatanaka A、Shinjo K、Ohka F、Wakabayashi T、Zong H、Natsume A、Kondo Y
    • Journal Title

      Oncogene

      Volume: 36 Issue: 32 Pages: 4629-4640

    • DOI

      10.1038/onc.2017.88

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Organotypic brain explant culture as a drug evaluation system for malignant brain tumors2017

    • Author(s)
      Minami N、Maeda Y、Shibao S、Arima Y、Ohka F、Kondo Y、Maruyama K、Kusuhara M、Sasayama T、Kohmura E、Saya H、Sampetrean O
    • Journal Title

      Cancer Medicine

      Volume: 6 Issue: 11 Pages: 2635-2645

    • DOI

      10.1002/cam4.1174

    • NAID

      120006373813

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Long non-coding RNAs as an epigenetic regulator in human cancers2017

    • Author(s)
      Kondo Yutaka、Shinjo Keiko、Katsushima Keisuke
    • Journal Title

      Cancer Science

      Volume: 108 Issue: 10 Pages: 1927-1933

    • DOI

      10.1111/cas.13342

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Roadmap for investigating epigenome deregulation and environmental origins of cancer.2017

    • Author(s)
      Herceg Z、Ghantous A、Wild CP.、Sklias A、Casati L、Duthie SJ.、Fry R、Issa JP、Kellermayer R、Koturbash I、Kondo Y、Lepeule J、Lima SCS、Marsit CJ、Rakyan V、Saffery R、Taylor JA.、Teschendorff AE.、Ushijima T、Vineis P、Walker CL、Waterland RA.、Wiemels J、Ambatipudi S、Degli Esposti D、Hernandez-Vargas H.
    • Journal Title

      Int J Cancer.

      Volume: 142 Issue: 5 Pages: 874-82

    • DOI

      10.1002/ijc.31014

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Presentation] Long non-coding RNA as an essential regulator of DNA replication for maintenance of cancer cells.2019

    • Author(s)
      Kondo Y.
    • Organizer
      Programme in Cancer and Stem Cell Biology
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Anti-sense Oligonucleotides-based Nucleic-acid Therapeutics Targeting Long Non-coding RNA in Human Cancers.2019

    • Author(s)
      Kondo Y.
    • Organizer
      8th Annual Conference of International Chemical Biology Society
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] A sensitive diagnostic method to detect aberrant DNA methylation in cfDNA of pancreas cancer patients2019

    • Author(s)
      Shinjo K, Katsushima K, Nagae G, Aburatani H, Yamao K, Kondo Y.
    • Organizer
      11th AACR-JCA Joint Conference - Breakthroughs in Cancer Research: Biology to Precision Medicine
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Pathogenic Epigenetic Consequences of Genetic Alterations in IDH wild-type Glioma2019

    • Author(s)
      Kondo Y.
    • Organizer
      3rd Meeting of International Society of Precision Cancer Medicine (ISPCM)
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 膠芽腫に対するアンチセンス核酸治療薬開発の試み2018

    • Author(s)
      近藤 豊
    • Organizer
      第27回 日本がん転移学会 学術集会・総会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 長鎖非翻訳RNAを標的とした新規がん治療戦略2018

    • Author(s)
      近藤 豊
    • Organizer
      第77回 日本癌学会学術総会
    • Related Report
      2018 Annual Research Report
  • [Presentation] グリオーマ発生に関わるヒストンメチル化を標的とした化合物の開発2018

    • Author(s)
      近藤 豊
    • Organizer
      理研 創薬・医療技術基盤プログラム 第4回 ワークショップ
    • Related Report
      2018 Annual Research Report
  • [Presentation] がん細胞の制御に関わる長鎖非翻訳RNA TUG1を標的とした新規治療法2018

    • Author(s)
      近藤 豊
    • Organizer
      第41回 日本分子生物学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Targeting epigenetics plasticity as a novel target for human neoplasia2018

    • Author(s)
      Kondo Y.
    • Organizer
      AACR-JCA Joint Symposium
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Development of a sensitive method to detect aberrant DNA methylation in cfDNA for pancreas cancer diagnosis2018

    • Author(s)
      Shinjo K, Katsushima K, Suzuki M, Nagae G, Aburatani H, Yamao K, Kondo Y.
    • Organizer
      AACR-JCA Joint Symposium
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Implication of Long Non-coding RNAs in Cancer Biology2018

    • Author(s)
      Kondo Y.
    • Organizer
      The Fourth Shanghai International Workshop of Epigenetics in Development and Diseases
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Targeting Notch-Regulated Non-coding RNA, TUG1, with Antisense Oligonucleotide as an Effective Treatment for Glioma2018

    • Author(s)
      Kondo Y.
    • Organizer
      14th Annual Meeting of the Oligonucleotide Therapeutics Society
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Cancer Epigenetics - Strategies for Clinical Therapy2018

    • Author(s)
      Kondo Y.
    • Organizer
      4th NNI Neuro-Oncology Symposium
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 長鎖非翻訳RNAを標的とした新規がん治療法の開発.2018

    • Author(s)
      近藤 豊.
    • Organizer
      第13回日本がん分子標的治療学 トランスレーショナルリサーチワークショップ
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Roles of IncRNAs in human cancers.2018

    • Author(s)
      Kondo Y.
    • Organizer
      INDO-JAPAN Conference on Epigenetics and Human Disease
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] がんとエピジェネティクス-膠芽腫の進展に関わるエピゲノム.2017

    • Author(s)
      近藤 豊.
    • Organizer
      ゲノム創薬・医療フォーラム(第7回談話会)
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 膠芽腫発生に関わるエピゲノムの解読とその臨床応用.2017

    • Author(s)
      近藤 豊.
    • Organizer
      がん研セミナー
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] ポリコームタンパク複合体を標的とした新規治療薬の開発.2017

    • Author(s)
      新城恵子、伊藤昭博、吉田稔、近藤 豊.
    • Organizer
      第21回日本がん分子標的治療学会学術集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Histone Modifying Enzymes in Cancer.2017

    • Author(s)
      Kondo Y.
    • Organizer
      24th Asia Pacific Cancer Conference
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] グリオーマ進展に関わるH3K27me3の制御.2017

    • Author(s)
      近藤 豊.
    • Organizer
      第76回日本癌学会学術総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Analysis of epigenetic signatures in glioma and its clinical application.2017

    • Author(s)
      近藤 豊.
    • Organizer
      日本脳神経外科集会 第76回学術総会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Involvement of long ncRNAs in canser.2017

    • Author(s)
      Kondo Y.
    • Organizer
      France-Japan Epigenetics Workshop-2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Signal-regulated non-coding RNA as an epigenetic modulator in cancer.2017

    • Author(s)
      Kondo Y.
    • Organizer
      The 3rd International Symposium on “Current Trends in Cancer and Signalling”
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Book] BIO Clinica2018

    • Author(s)
      近藤 豊
    • Total Pages
      100
    • Publisher
      株式会社 北隆館
    • Related Report
      2018 Annual Research Report
  • [Book] BIO Clinica2018

    • Author(s)
      勝島啓佑、近藤 豊
    • Total Pages
      100
    • Publisher
      株式会社 北隆館
    • Related Report
      2018 Annual Research Report
  • [Book] Medical Science Digest2018

    • Author(s)
      鈴木美穂、勝島啓佑、近藤 豊
    • Total Pages
      54
    • Publisher
      株式会社ニューサイエンス社
    • Related Report
      2018 Annual Research Report
  • [Book] 医学のあゆみ2018

    • Author(s)
      勝島啓佑、鈴木美穂、近藤 豊
    • Total Pages
      70
    • Publisher
      医歯薬出版株式会社
    • Related Report
      2018 Annual Research Report
  • [Book] BIO Clinica Vol.33 No.1 (核酸化合物の医療への応用)2018

    • Author(s)
      近藤 豊.
    • Total Pages
      100
    • Publisher
      北隆館
    • Related Report
      2017 Annual Research Report
  • [Book] BIO Clinica Vol.33 No.1 (長鎖非翻訳RNAを標的とする革新的核酸治療薬の開発)2018

    • Author(s)
      勝島啓佑、近藤 豊.
    • Total Pages
      100
    • Publisher
      北隆館
    • Related Report
      2017 Annual Research Report
  • [Book] 腫瘍内科 Vol.19 No.4 (長鎖非翻訳RNAを標的としたがん治療薬の開発)2017

    • Author(s)
      勝島啓佑、近藤 豊.
    • Total Pages
      510
    • Publisher
      科学評論社
    • Related Report
      2017 Annual Research Report
  • [Book] エピジェネティクス実験スタンダード (パイロシークエンス法 複数のCpGメチル化の定量)2017

    • Author(s)
      新城恵子、近藤 豊.
    • Total Pages
      394
    • Publisher
      羊土社
    • Related Report
      2017 Annual Research Report
  • [Book] がん転移学 上 (がん幹細胞とエピゲノム)2017

    • Author(s)
      田崎慶彦、勝島啓祐、木村和哲、近藤 豊.
    • Total Pages
      305
    • Publisher
      日本臨牀社
    • Related Report
      2017 Annual Research Report

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Published: 2017-04-28   Modified: 2021-02-19  

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