Functional analysis of genomic mutations and screening of novel drug, based on comprehensive genomic analysis of muscloskeletal tumors
Project/Area Number |
17H03596
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Research Category |
Grant-in-Aid for Scientific Research (B)
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Allocation Type | Single-year Grants |
Section | 一般 |
Research Field |
Tumor therapeutics
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Research Institution | National Cancer Center Japan (2018-2019) The University of Tokyo (2017) |
Principal Investigator |
Hirata Makoto 国立研究開発法人国立がん研究センター, 中央病院, 医員 (50401071)
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Project Period (FY) |
2017-04-01 – 2020-03-31
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Project Status |
Completed (Fiscal Year 2019)
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Budget Amount *help |
¥17,550,000 (Direct Cost: ¥13,500,000、Indirect Cost: ¥4,050,000)
Fiscal Year 2019: ¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2018: ¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2017: ¥8,710,000 (Direct Cost: ¥6,700,000、Indirect Cost: ¥2,010,000)
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Keywords | 骨軟部腫瘍 / ゲノム解析 / 機能解析 |
Outline of Final Research Achievements |
We have established Japan Sarcoma Genome Consortium to perform genomic analysis or other multi-omics analysis of muscloskeletal tumors, in which progress of clinical and basic research is delayed due to their variety and rarity. Current study aimed identification of putative drugs by performing functional analysis of genomic alterations which were recurrently detected in previous genomic analysis for muscloskeletal tumors. Based on the previous analysis, several genomic alterations, identified in some histological subtypes including dedifferentiated liposarcoma, tenosynovial giant cell tumor, and chondrosarcoma, were selected for the following functional analysis. Functional in vitro and in vivo analyses were performed in combination with analysis of previous genomic and clinical data. Putative drugs for each histological subtype have been identified in this project.
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Academic Significance and Societal Importance of the Research Achievements |
骨軟部腫瘍は組織型が多様で希少であることから、他のがん種と比べて分子標的薬などの新規治療薬開発が遅れている。本研究を実施するにあたり、我々は骨軟部腫瘍ゲノムコンソーシアムを立ち上げ、ゲノム解析を中心としたマルチオミックス解析を実施している。しかし、そうしたゲノム解析で検出される遺伝子異常の詳細な機能解析は実施できておらず、その遺伝子異常の病的意義、治療標的としての位置づけは不明であった。本研究ではそうした遺伝子異常について機能解析を行い、治療標的となるシグナル経路、候補薬剤の選定を推進した。今後、本研究で得られた結果が骨軟部腫瘍の新規治療薬開発に向けた基礎データとなることが期待される。
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Report
(4 results)
Research Products
(54 results)
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[Journal Article] Trans-biobank analysis with 676,000 individuals elucidates the association of polygenic risk scores of complex traits with human lifespan2020
Author(s)
Sakaue S, Kanai M, Karjalainen J, Akiyama M, Kurki M, Matoba N, Takahashi A, Hirata M, Kubo M, Matsuda K, Murakami Y; FinnGen, Daly MJ, Kamatani Y, Okada Y
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Journal Title
Nat Med
Volume: 26
Issue: 4
Pages: 542-548
DOI
Related Report
Peer Reviewed / Int'l Joint Research
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[Journal Article] Dimensionality reduction reveals fine-scale structure in the Japanese population with consequences for polygenic risk prediction2020
Author(s)
Sakaue S, Hirata J, Kanai M, Suzuki K, Akiyama M, Lai Too C, Arayssi T, Hammoudeh M, Al Emadi S, Masri BK, Halabi H, Badsha H, Uthman IW, Saxena R, Padyukov L, Hirata M, Matsuda K, Murakami Y, Kamatani Y, Okada Y
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Journal Title
Nat Commun
Volume: 11
Issue: 1
Pages: 1569-1569
DOI
Related Report
Peer Reviewed / Open Access / Int'l Joint Research
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[Journal Article] GWAS of 165,084 Japanese individuals identified nine loci associated with dietary habits.2020
Author(s)
Matoba N, Akiyama M, Ishigaki K, Kanai M, Takahashi A, Momozawa Y, Ikegawa S, Ikeda M, Iwata N, Hirata M, Matsuda K, Murakami Y, Kubo M, Kamatani Y, Okada Y
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Journal Title
Nat Hum Behav
Volume: 4
Issue: 3
Pages: 308-346
DOI
Related Report
Peer Reviewed
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[Journal Article] Genome-wide meta-analysis identifies multiple novel loci associated with serum uric acid levels in Japanese individuals.2019
Author(s)
Nakatochi M, Kanai M, Nakayama A, Hishida A, Kawamura Y, Ichihara S, Akiyama M, Ikezaki H, Furusyo N, Shimizu S, Yamamoto K, et al.
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Journal Title
Commun Biol.
Volume: 2
Issue: 1
Pages: 115-115
DOI
NAID
Related Report
Peer Reviewed / Open Access
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[Journal Article] Identification of 28 new susceptibility loci for type 2 diabetes in the Japanese population.2019
Author(s)
Suzuki K, Akiyama M, Ishigaki K, Kanai M, Hosoe J, Shojima N, Hozawa A, Kadota A, Kuriki K, Naito M, Tanno K, Ishigaki Y, et al.
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Journal Title
Nat Genet.
Volume: 51
Issue: 3
Pages: 379-386
DOI
Related Report
Peer Reviewed / Open Access / Int'l Joint Research
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[Journal Article] Genetic and phenotypic landscape of the major histocompatibilty complex region in the Japanese population.2019
Author(s)
Hirata J, Hosomichi K, Sakaue S, Kanai M, Nakaoka H, Ishigaki K, Suzuki K, Akiyama M, Kishikawa T, Ogawa K, Masuda T, Yamamoto K, Hirata M, Matsuda K, Momozawa Y, Inoue I, Kubo M, Kamatani Y, Okada Y.
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Journal Title
Nat Genet
Volume: 51
Issue: 3
Pages: 470-480
DOI
Related Report
Peer Reviewed / Int'l Joint Research
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[Journal Article] Frequent mutations of genes encoding vacuolar H+ -ATPase components in granular cell tumors.2019
Author(s)
Sekimizu M, Yoshida A, Mitani S, Asano N, Hirata M, Kubo T, Yamazaki F, Sakamoto H, Kato M, Makise N, Mori T, Yamazaki N, Sekine S, Oda I, Watanabe SI, Hiraga H, Yonemoto T, Kawamoto T, Naka N, Funauchi Y, Nishida Y, Honoki K, Kawano H, Tsuchiya H, Kunisada T, Matsuda K, Inagaki K, Kawai A, Ichikawa H.
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Journal Title
Genes Chromosomes Cancer
Volume: 58
Issue: 6
Pages: 373-380
DOI
Related Report
Peer Reviewed / Open Access
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[Journal Article] Germline pathogenic variants of 11 breast cancer genes in 7,051 Japanese patients and 11,241 controls.2019
Author(s)
Momozawa Y, Iwasaki Y, Parsons MT, Kamatani Y, Takahashi A, Tamura C, Katagiri T, Yoshida T, Nakamura S, Sugano K, Miki Y, Hirata M, Matsuda K, Spurdle AB, Kubo M.
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Journal Title
Nat Commun.
Volume: 9
Issue: 1
Pages: 4083-4083
DOI
NAID
Related Report
Peer Reviewed / Open Access / Int'l Joint Research
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[Journal Article] Genome-wide association study (GWAS) of ovarian cancer in Japanese predicted regulatory variants in 22q13. 1.2018
Author(s)
Yodsurang V, Tang Y, Takahashi Y, Tanikawa C, Kamatani Y, Takahashi A, Momozawa Y, Fuse N, Sugawara J, Shimizu A, Fukushima A, Hishida A, Furusyo N, Naito M, Wakai K, Yamaji T, Sawada N, Iwasaki M, Tsugane S, Hirata M, Murakami Y, Kubo M, Matsuda K.
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Journal Title
PLoS One
Volume: 13
Issue: 12
Pages: e0209096-e0209096
DOI
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Peer Reviewed / Open Access
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[Journal Article] Genetic analysis of quantitative traits in the Japanese population links cell types to complex human diseases2018
Author(s)
Kanai M, Akiyama M, Takahashi A, Matoba N, Momozawa Y, Ikeda M, Iwata N, Ikegawa S, Hirata M, Matsuda K, Kubo M, Okada Y, Kamatani Y
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Journal Title
Nat Genet
Volume: 50
Issue: 3
Pages: 390-400
DOI
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Peer Reviewed / Int'l Joint Research
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[Journal Article] Genome-wide association study identifies 112 new loci for body mass index in the Japanese population2017
Author(s)
Akiyama M, Okada Y, Kanai M, Takahashi A, Momozawa Y, Ikeda M, Iwata N, Ikegawa S, Hirata M, Matsuda K, Iwasaki M, Yamaji T, Sawada N, Hachiya T, Tanno K, Shimizu A, Hozawa A, Minegishi N, Tsugane S, Yamamoto M, Kubo M and Kamatani Y
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Journal Title
Nat Genet
Volume: 49
Issue: 10
Pages: 1458-1462
DOI
Related Report
Peer Reviewed / Open Access
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[Journal Article] Identification of a p53 target, CD137L, that mediates growth suppression and immune response of osteosarcoma cells2017
Author(s)
Tsuda Y, Tanikawa C, Miyamoto T, Hirata M, Yodsurang V, Zhang YZ, Imoto S, Yamaguchi R, Miyano S, Takayanagi H, Kawano H, Nakagawa H, Tanaka S, Matsuda K
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Journal Title
Sci Rep
Volume: 7(1)
Issue: 1
Pages: 10739-10739
DOI
Related Report
Peer Reviewed / Open Access / Int'l Joint Research
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