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Study for chromosomal instability leading to human disorders

Research Project

Project/Area Number 17H03616
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Medical genome science
Research InstitutionNational Center for Child Health and Development

Principal Investigator

Fukami Maki  国立研究開発法人国立成育医療研究センター, 分子内分泌研究部, 部長 (40265872)

Co-Investigator(Kenkyū-buntansha) 倉橋 浩樹  藤田医科大学, 総合医科学研究所, 教授 (30243215)
Project Period (FY) 2017-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥17,030,000 (Direct Cost: ¥13,100,000、Indirect Cost: ¥3,930,000)
Fiscal Year 2019: ¥6,630,000 (Direct Cost: ¥5,100,000、Indirect Cost: ¥1,530,000)
Fiscal Year 2018: ¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2017: ¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Keywordsゲノム / 染色体構造異常 / X染色体不活化 / 先天奇形 / 遺伝子
Outline of Final Research Achievements

This study aimed to clarify novel mechanisms and phenotypic effects of de novo chromosomal abnormalities in the germline. To this end, we performed genome analyses for DNA samples obtained from patients with various types of developmental defects. Our results include (i) characterization of multifocal genomic crisis during spermatogenesis, (ii) determination of the timing of aneuploid rescue in early-stage embryos, (iii) clarification of life-long effects of Y chromosomal abnormalities, (iv) clarification of the effects of sex chromosomal rearrangements on epigenetic status, and (v) identification of a case with autosomal tetrasomy possibly created through incomplete trisomy rescue in micronuclei.

Academic Significance and Societal Importance of the Research Achievements

染色体数あるいは構造の異常は、先天性疾患の原因の一つとして重要である。本研究では、多数の臨床検体の解析を行い、染色体異常の発症機序および臨床症状との関連について検討した。その結果、精子形成過程で染色体構造変化を招く新たなメカニズムが明らかとなった。また、Y染色体の数的変化が生涯にわたって健康に影響を及ぼすことが見出された。本研究の成果は、世代間においてどのように遺伝的情報が伝達され、また変化し得るかを理解するための基盤となる。

Report

(4 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Annual Research Report
  • 2017 Annual Research Report
  • Research Products

    (23 results)

All 2020 2019 2018 2017 Other

All Int'l Joint Research (1 results) Journal Article (13 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 13 results,  Open Access: 6 results) Presentation (6 results) (of which Int'l Joint Research: 2 results,  Invited: 6 results) Book (1 results) Remarks (2 results)

  • [Int'l Joint Research] Heidelberg University(ドイツ)

    • Related Report
      2018 Annual Research Report
  • [Journal Article] De Novo Small Supernumerary Marker Chromosomes Arising From Partial Trisomy Rescue2020

    • Author(s)
      Matsubara Keiko、Yanagida Kaede、Nagai Toshiro、Kagami Masayo、Fukami Maki
    • Journal Title

      Frontiers in Genetics

      Volume: 11

    • DOI

      10.3389/fgene.2020.00132

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] DNA Methylation Status of SHOX-Flanking CpG Islands in Healthy Individuals and Short Stature Patients with Pseudoautosomal Copy Number Variations.2019

    • Author(s)
      Ogushi K, Muroya K, Shima H, Jinno T, Miyado M and Fukami M.
    • Journal Title

      Cytogenetic and Genome Research

      Volume: 158 Issue: 2 Pages: 56-62

    • DOI

      10.1159/000500468

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Unbalanced Y;7 Translocation between Two Low-Similarity Sequences Leading to <b><i>SRY</i></b>-Positive 45,X Testicular Disorders of Sex Development2019

    • Author(s)
      Uehara Erika、Hattori Atsushi、Shima Hirohito、Ishiguro Akira、Abe Yu、Ogata Tsutomu、Ogawa Eishin、Fukami Maki
    • Journal Title

      Cytogenetic and Genome Research

      Volume: 158 Issue: 3 Pages: 115-120

    • DOI

      10.1159/000501378

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Transient multifocal genomic crisis creating chromothriptic and non-chromothriptic rearrangements in prezygotic testicular germ cells.2019

    • Author(s)
      Hattori A, Okamura K, Terada Y, Tanaka R, Katoh-Fukui Y, Matsubara Y, Matsubara K, Kagami M, Horikawa R, Fukami M
    • Journal Title

      BMC Med Genomics.

      Volume: 12 Issue: 1 Pages: 77-77

    • DOI

      10.1186/s12920-019-0526-3

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] SHOX far-downstream copy-number variations involving cis-regulatory nucleotide variants in two sisters with Leri-Weill dyschondrosteosis2019

    • Author(s)
      Ogushi Kenichiro、Muroya Koji、Shima Hirohito、Jinno Tomoko、Miyado Mami、Fukami Maki
    • Journal Title

      American Journal of Medical Genetics Part A

      Volume: 179 Issue: 9 Pages: 1778-1782

    • DOI

      10.1002/ajmg.a.61275

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Frequency of Common Copy-Number Variations at 15q11.2q13 in Sperm of Healthy Men2019

    • Author(s)
      1.Kinoshita T, Mikami M, Ayabe T, Matsubara K, Ono H, Ohki K, Fukami M*, Katoh-Fukui Y
    • Journal Title

      Cytogenet Genome Res.

      Volume: 159 Issue: 2 Pages: 66-73

    • DOI

      10.1159/000503267

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] (Epi)genetic defects of MKRN3 are rare in Asian patients with central precocious puberty.2019

    • Author(s)
      Suzuki E, Shima H, Kagami M, Soneda S, Tanaka T, Yatsuga S, Nishioka J, Oto Y, Kamiya T, Naiki Y, Ogata T, Fujisawa Y, Nakamura A, Kawashima S, Morikawa S, Horikawa R, Sano S, Fukami M
    • Journal Title

      Human Genome Variation

      Volume: - Issue: 1 Pages: 7-7

    • DOI

      10.1038/s41439-019-0039-9

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Microdeletion in Xq28 with a polymorphic inversion in a patient with FLNA-associated progressive lung disease2019

    • Author(s)
      Yoshii Keisuke、Matsumoto Hideki、Hirasawa Kyoko、Sakauchi Masako、Hara Hiroko、Ito Susumu、Osawa Makiko、Fukami Maki、Horikawa Reiko、Nagata Satoru
    • Journal Title

      Respiratory Investigation

      Volume: 未定 Issue: 4 Pages: 395-398

    • DOI

      10.1016/j.resinv.2019.02.008

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 1.Losing maleness: Somatic Y chromosome loss at every stage of a man's life.2019

    • Author(s)
      Miyado Mami, Fukami Maki
    • Journal Title

      FASEB BioAdvances

      Volume: 未定

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Maternal Uniparental Disomy for Chromosome 20: Physical and Endocrinological Characteristics of Five Patients2018

    • Author(s)
      Kawashima Sayaka、Nakamura Akie、Inoue Takanobu、Matsubara Keiko、Horikawa Reiko、Wakui Keiko、Takano Kyoko、Fukushima Yoshimitsu、Tatematsu Toshi、Mizuno Seiji、Tsubaki Junko、Kure Shigeo、Matsubara Yoichi、Ogata Tsutomu、Fukami Maki、Kagami Masayo
    • Journal Title

      The Journal of Clinical Endocrinology & Metabolism

      Volume: 103 Issue: 6 Pages: 2083-2088

    • DOI

      10.1210/jc.2017-02780

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Somatically acquired isodicentric Y and mosaic loss of chromosome Y in a boy with hypospadias.2018

    • Author(s)
      Miyado M, Muroya K, Katsumi M, Saito K, Kon M and Fukami M.
    • Journal Title

      Cytogenet Genome Res. (in press)

      Volume: 印刷中 Issue: 3 Pages: 0-0

    • DOI

      10.1159/000488162

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Clinical Consequences of Chromothripsis and Other Catastrophic Cellular Events.2018

    • Author(s)
      Fukami M, Kurahashi H.
    • Journal Title

      Methods Mol Biol.

      Volume: 1769 Pages: 21-33

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] A de novo 50-bp <b><i>GNAS</i></b> Intragenic Duplication in a Patient with Pseudohypoparathyroidism Type 1a2017

    • Author(s)
      Suzuki Erina、Bo Ryosuke、Sue Kaori、Awano Hiroyuki、Ogata Tsutomu、Narumi Satoshi、Kagami Masayo、Sano Shinichiro、Fukami Maki
    • Journal Title

      Cytogenetic and Genome Research

      Volume: 153 Issue: 3 Pages: 125-130

    • DOI

      10.1159/000485644

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Presentation] ヒトの性の新知見2019

    • Author(s)
      深見真紀
    • Organizer
      第41回北海道小児内分泌研究会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] New aspects in human sex development.2019

    • Author(s)
      Fukami M
    • Organizer
      Pediatric Academic Societies Meeting
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Molecular basis of disorders of sex development In: Meet-the-Expert session.2018

    • Author(s)
      Fukami M
    • Organizer
      16th Asia-Oceania Congress of Endocrinology
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Y染色体とMen’s health.2018

    • Author(s)
      深見真紀
    • Organizer
      泌尿器抗加齢医学研究会第10回研究会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 成長障害の分子基盤:ゲノム疾患としてのSHOX異常症2017

    • Author(s)
      深見真紀
    • Organizer
      第90回日本内分泌学会学術総会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 染色体構造異常・片親性ダイソミーと疾患2017

    • Author(s)
      深見真紀
    • Organizer
      日本人類遺伝学会第62回大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Book] 遺伝子から解き明かす性の不思議な世界2019

    • Author(s)
      深見真紀
    • Total Pages
      542
    • Publisher
      一式出版
    • Related Report
      2018 Annual Research Report
  • [Remarks] 国立研究開発法人国立成育医療研究センター分子内分泌研究部

    • URL

      http://nrichd.ncchd.go.jp/endocrinology/

    • Related Report
      2018 Annual Research Report
  • [Remarks] 研究開発法人国立成育医療研究センター分子内分泌研究部

    • URL

      http://nrichd.ncchd.go.jp/endocrinology/

    • Related Report
      2017 Annual Research Report

URL: 

Published: 2017-04-28   Modified: 2021-02-19  

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