• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Maintenance of genetic diversity after bottleneck and understanding low temperature adaptation mechanism in invasive alien species

Research Project

Project/Area Number 17H03728
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Ecology/Environment
Research InstitutionTohoku University

Principal Investigator

Makino Takashi  東北大学, 生命科学研究科, 教授 (20443442)

Project Period (FY) 2017-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥17,680,000 (Direct Cost: ¥13,600,000、Indirect Cost: ¥4,080,000)
Fiscal Year 2020: ¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2019: ¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2018: ¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2017: ¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Keywords適応進化 / 侵略的外来種 / 環境適応 / adaptation / invasive species / 遺伝的多様性 / 低温適応
Outline of Final Research Achievements

The purpose of this study is to understand the genetic basis of the high environmental adaptability of Procambarus clarkii, which has been invaded to cold regions in a short period of time. Genome resequencing was conducted using genomic DNA of P. clarkii collected from Sapporo, Aomori, and Kamakura to estimate the loci involved in low temperature adaptation of the crayfish. As a result, we found several genes that respond to low temperature neighboring alleles that are highly frequent in a genome of the Sapporo population. Among these genes, the gene encoding Rho GTPase regulating protein showed a rapid increase in expression in the Sapporo population under low temperature conditions. These results suggest that a molecular pathway involving this gene may contribute to the adaptation of the Sapporo population to low temperatures.

Academic Significance and Societal Importance of the Research Achievements

本研究ではアメリカザリガニの低温適応に関わる複数の遺伝子候補を見出した。温度への適応は他の外来種の侵入・分布拡大メカニズムと共通する可能性が高く、外来種全体の侵入メカニズムの理解に繋がると期待できる。注目度の高い外来種の侵略性に関わるメカニズムの解明に取り組んだ本研究の社会的な意義は大きい。

Report

(5 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Annual Research Report
  • 2018 Annual Research Report
  • 2017 Annual Research Report
  • Research Products

    (10 results)

All 2020 2019 2017 Other

All Journal Article (4 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 4 results,  Open Access: 3 results) Presentation (4 results) (of which Invited: 3 results) Remarks (2 results)

  • [Journal Article] Accumulation of deleterious mutations in landlocked threespine stickleback populations2020

    • Author(s)
      Yoshida, K., Ravinet, M., Makino, T., Toyoda, A., Kokita, T., Mori, S., and Kitano, J.
    • Journal Title

      Genome Biology and Evolution

      Volume: 12 Issue: 4 Pages: 479-492

    • DOI

      10.1093/gbe/evaa065

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Sensitivity to gene dosage and gene expression affects genes with copy number variants observed among neuropsychiatric diseases2020

    • Author(s)
      aria Yamasaki, Takashi Makino, Seik-Soon Khor et al
    • Journal Title

      BMC Medical Genomics

      Volume: Mar 29 Issue: 1 Pages: 55-55

    • DOI

      10.1186/s12920-020-0699-9

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Invasive invertebrates associated with highly duplicated gene content2019

    • Author(s)
      Makino T and Kawata M
    • Journal Title

      Molecular Ecology

      Volume: in press Issue: 7 Pages: 1652-1663

    • DOI

      10.1111/mec.15019

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] JmjC domain-encoding genes are conserved in highly regenerative metazoans and are associated with planarian whole-body regeneration2019

    • Author(s)
      Cao P, Kumagai N, Inoue T, Agata K and Makino T.
    • Journal Title

      Genome Biology and Evolution

      Volume: 11(2) Issue: 2 Pages: 552-564

    • DOI

      10.1093/gbe/evz021

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] Genomic features of asymmetric evolution in ohnologs2020

    • Author(s)
      牧野能士
    • Organizer
      日本進化学会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 生態系が駆動するゲノム進化2020

    • Author(s)
      牧野能士
    • Organizer
      日本生態学会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Genome evolution of vertebrates after whole genome duplications2020

    • Author(s)
      牧野能士
    • Organizer
      日本分子生物学会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Invasive animal genomes with high duplicated gene content2017

    • Author(s)
      Takashi Makino
    • Organizer
      第6回生命医薬情報学連合大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Remarks] 進化ゲノミクス分野

    • URL

      https://www.lifesci.tohoku.ac.jp/evolgenomics

    • Related Report
      2020 Annual Research Report
  • [Remarks] 進化ゲノミクス研究室

    • URL

      https://www.lifesci.tohoku.ac.jp/evolgenomics

    • Related Report
      2019 Annual Research Report

URL: 

Published: 2017-04-28   Modified: 2022-01-27  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi