• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Emerging process of Enterohemorrhagic Escherichia coli revealed by a large-scale genome analysis

Research Project

Project/Area Number 17H04077
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Bacteriology (including mycology)
Research InstitutionKyushu University

Principal Investigator

Yoshitoshi Ogura  九州大学, 医学研究院, 准教授 (40363585)

Co-Investigator(Kenkyū-buntansha) 梶谷 嶺  東京工業大学, 生命理工学院, 助教 (40756706)
Project Period (FY) 2017-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥17,680,000 (Direct Cost: ¥13,600,000、Indirect Cost: ¥4,080,000)
Fiscal Year 2019: ¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2018: ¥7,540,000 (Direct Cost: ¥5,800,000、Indirect Cost: ¥1,740,000)
Fiscal Year 2017: ¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Keywords志賀毒素産生性大腸菌 / 腸管病原性大腸菌 / 志賀毒素 / 3型分泌装置 / 進化 / ゲノム / 腸管出血性大腸菌 / 病原性 / ファージ
Outline of Final Research Achievements

To develop infection control strategies, better understanding of the evolutionary processes of pathogens is essential. Shiga toxin (Stx)-producing Escherichia coli (STEC) and enteropathogenic E. coli (EPEC) are important human pathogens sharing cattle as the primary reservoir. Here, a large-scale genomic comparison of bovine and human commensal E. coli and clinical STEC and EPEC strains reveals that bovine commensal strains are phylogenetically distinct from human commensal strains and that the bovine-adapted lineage is serving as evolutionary sources of the emergence of STEC and EPEC. Identification of virulence gene communities each accumulated in STEC and EPEC suggests the presence of a selection pressure(s) to promote their accumulation in bovine intestine, which could be targets for developing efficient strategies to control these pathogens.

Academic Significance and Societal Importance of the Research Achievements

本研究により、ウシ腸内には、ウシ常在大腸菌へ多数の病原因子を蓄積させる選択圧が存在する可能性が示された。その選択圧の候補の1つとして、ウシ腸内で大腸菌を捕食している原生生物が挙げられる。今後は、その選択圧を明らかにし、病原性大腸菌出現の仕組みを完全に解明することで、病原性大腸菌を制御する手法の開発が可能となり、病原性大腸菌感染症の予防や安全な食肉生産に繋がると期待される。

Report

(4 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Annual Research Report
  • 2017 Annual Research Report
  • Research Products

    (19 results)

All 2020 2019 2018 Other

All Int'l Joint Research (7 results) Journal Article (4 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 4 results,  Open Access: 3 results) Presentation (8 results) (of which Int'l Joint Research: 2 results)

  • [Int'l Joint Research] University of Wisconsin(米国)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] University of Liege(ベルギー)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] INRA(フランス)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] University of Liege(ベルギー)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] University of Wisconsin(米国)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] University of Toulouse(フランス)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] University of Liege(Belgium)

    • Related Report
      2017 Annual Research Report
  • [Journal Article] Escherichia coli O8:H8 Carrying a Novel Variant of the Heat-Labile Enterotoxin LT2 Gene Caused Outbreaks of Diarrhea2020

    • Author(s)
      Ishimaru Kai、Sasaki Mari、Narimatsu Hiroshi、Arimizu Yoko、Gotoh Yasuhiro、Nakamura Keiji、Hayashi Tetsuya、Ogura Yoshitoshi
    • Journal Title

      Open Forum Infectious Diseases

      Volume: 7 Issue: 1

    • DOI

      10.1093/ofid/ofaa021

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Large-scale genome analysis of bovine commensal Escherichia coli reveals that bovine-adapted E. coli lineages are serving as evolutionary sources of the emergence of human intestinal pathogenic strains.2019

    • Author(s)
      Arimizu Y, Kirino Y, Sato MP, Uno K, Sato T, Gotoh Y, Auvray F, Brugere H, Oswald E, Mainil JG, Anklam KS, Dopfer D, Yoshino S, Ooka T, Tanizawa Y, Nakamura Y, Iguchi A, Morita-Ishihara T, Ohnishi M, Akashi K, Hayashi T, Ogura Y
    • Journal Title

      Genome Research

      Volume: 29 Issue: 9 Pages: 1495-1505

    • DOI

      10.1101/gr.249268.119

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Genomic Characterization of β-Glucuronidase?Positive Escherichia coli O157:H7 Producing Stx2a2018

    • Author(s)
      Ogura Yoshitoshi、Seto Kazuko、Morimoto Yo、Nakamura Keiji、Sato Mitsuhiko P.、Gotoh Yasuhiro、Itoh Takehiko、Toyoda Atsushi、Ohnishi Makoto、Hayashi Tetsuya
    • Journal Title

      Emerging Infectious Diseases

      Volume: 24 Issue: 12 Pages: 2219-2227

    • DOI

      10.3201/eid2412.180404

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Effects of bacterial pollution caused by a strong typhoon event and the restoration of a recreational beach: Transitions of fecal bacterial counts and bacterial flora in beach sand2018

    • Author(s)
      Suzuki, Y., Teranishi, K., Matsuwaki, T., Nukazawa, K., Ogura, Y.
    • Journal Title

      Science of the Total Environment

      Volume: 640-641 Pages: 52-61

    • DOI

      10.1016/j.scitotenv.2018.05.265

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Presentation] 集団下痢症事例から分離された病原因子不明大腸菌のゲノム解析2020

    • Author(s)
      小椋 義俊,佐々木 麻里,成松 浩志,石丸 海,有水 遥子, 後藤 恭宏,中村 佳司,林 哲也
    • Organizer
      第93回日本細菌学会総会
    • Related Report
      2019 Annual Research Report
  • [Presentation] ゲノムから見た大腸菌病原因子の真の役割2019

    • Author(s)
      小椋義俊、有水遥子、林哲也
    • Organizer
      第66回トキシンシンポジウム
    • Related Report
      2019 Annual Research Report
  • [Presentation] The population structure of enterohemorrhagic Escherichia coli O26:H11 with recent and repeated stx2 acquisition in multiple lineages2018

    • Author(s)
      Yoshitoshi Ogura, Kazuko Seto, Shuji Yoshino, Junko Isobe, Yoshiki Etoh, Keiko Kimata, Eriko Maeda, Denis Pierard, Masahiro Kusumoto, Masato Akiba, Tadasuke Ooka, Nozomi Ishijima, Ken-ichi Lee, Sunao Iyoda, Jacques G. Mainil, and Tetsuya Hayashi
    • Organizer
      10th international symposium on Shiga toxin producing Escherichia coli infections
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Emergence and evolution of Shiga toxin-producing Escherichia coli (STEC) and enteropathogenic E. coli (EPEC) from bovine commensal E. coli2018

    • Author(s)
      Yoshitoshi Ogura
    • Organizer
      "The Second SMBE Satellite Workshop on Genome Evolution in Pathogen Transmission and Disease"
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 水平伝播による細菌の環境適応と病原性進化2018

    • Author(s)
      有水遥子、林哲也、小椋義俊
    • Organizer
      日本遺伝学会第90回大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Genome analysis of bovine commensal E. coli; novel insights into the evolutional pathway of EHEC2018

    • Author(s)
      Yoshitoshi Ogura
    • Organizer
      第91回日本細菌学会総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ウシとヒトの常在性大腸菌の大規模比較ゲノム解析による腸管出血性大腸菌出現プロセスの解明2018

    • Author(s)
      有水遥子、林哲也、小椋義俊
    • Organizer
      第91回日本細菌学会総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 腸管出血性大腸菌の出現プロセス解明を目指したウシ・ヒト常在大腸菌の大規模比較ゲノム解析2018

    • Author(s)
      中島遥子、桐野有美、宇野浩一、佐藤寿夫、佐藤光彦、吉野修司、大岡唯祐、後藤恭宏、谷沢靖洋、中村 保一、井口純、石原朋子、大西真、林哲也、小椋義俊
    • Organizer
      第13回日本ゲノム微生物学会年会
    • Related Report
      2017 Annual Research Report

URL: 

Published: 2017-04-28   Modified: 2021-02-19  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi