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Genome editing technology that enables gene correction therapies

Research Project

Project/Area Number 17H04993
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypeSingle-year Grants
Research Field Medical genome science
Research InstitutionTokyo Metropolitan Institute of Medical Science

Principal Investigator

MIYAOKA Yuichiro  公益財団法人東京都医学総合研究所, 生体分子先端研究分野, プロジェクトリーダー (20549521)

Project Period (FY) 2017-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥23,660,000 (Direct Cost: ¥18,200,000、Indirect Cost: ¥5,460,000)
Fiscal Year 2019: ¥5,980,000 (Direct Cost: ¥4,600,000、Indirect Cost: ¥1,380,000)
Fiscal Year 2018: ¥8,450,000 (Direct Cost: ¥6,500,000、Indirect Cost: ¥1,950,000)
Fiscal Year 2017: ¥9,230,000 (Direct Cost: ¥7,100,000、Indirect Cost: ¥2,130,000)
Keywordsゲノム編集 / HDR / NHEJ / iPS細胞 / 再生医療 / 遺伝子修復 / Cas9改変体 / ノックイン / 相同組換え / 非相同末端結合 / CRISPR/Cas9
Outline of Final Research Achievements

CRISPR/Cas9-mediated genome editing is accomplished by cleavage of target DNA sequences by Cas9 guided by sequence-specific gRNA molecules. The two repair pathways, HDR and NHEJ, are activated by Cas9 at the target sites. NHEJ often induces random insertions or deletions at the target sites. In contrast, the DNA sequences are precisely repaired based on the sequences of template DNA that is homologous to the cleaved DNA in HDR. Therefore, HDR is particularly useful for precise genome editing, because the target DNA sequences are replaced by those of donor DNA molecules that we can introduce into the cell via DNA recombination. However, in general, HDR is much more infrequent than NHEJ.
In this study, we reveled that modification of the interaction between the Cas9-gRNA complex and DNA can enhance HDR. This trend was observed in all three cell types we tested, that is, in HEK293T cells, HeLa cells, and human iPS cells.

Academic Significance and Societal Importance of the Research Achievements

細胞の持つ遺伝情報を書き換えるゲノム編集技術は、医療や農業への応用が期待されるが、その実現には、正確に遺伝情報の編集を行う必要がある。CRISPR/Cas9と呼ばれるゲノム編集に用いられるツールは、本来細菌や古細菌の免疫機構であり、必ずしも哺乳類細胞のゲノム編集のために最適化されていない。本研究では、CRISPR/Cas9の標的DNAへの結合の仕方を調整することで、編集の正確さを高められることを見出した。今後のゲノム編集技術の応用につながることが期待される。

Report

(4 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Annual Research Report
  • 2017 Annual Research Report
  • Research Products

    (19 results)

All 2019 2018 2017 Other

All Journal Article (4 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 2 results,  Open Access: 1 results) Presentation (10 results) (of which Int'l Joint Research: 5 results,  Invited: 3 results) Book (1 results) Remarks (4 results)

  • [Journal Article] 一塩基置換による疾患モデル細胞作製2019

    • Author(s)
      宮岡 佑一郎
    • Journal Title

      月刊「細胞」

      Volume: 3 Pages: 17-20

    • Related Report
      2019 Annual Research Report
  • [Journal Article] Clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated protein 9 with improved proof-reading enhances homology-directed repair2018

    • Author(s)
      Tomoko Kati-Inui, Gou Takahashi, Szuyin Hsu, Yuichiro Miyaoka
    • Journal Title

      Nucleic Acids Research

      Volume: 1 Issue: 9 Pages: 4677-4688

    • DOI

      10.1093/nar/gky264

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Detection and Quantification of HDR and NHEJ Induced by Genome Editing at Endogenous Gene Loci Using Droplet Digital PCR2018

    • Author(s)
      Miyaoka Yuichiro、Mayerl Steven J.、Chan Amanda H.、Conklin Bruce R.
    • Journal Title

      Methods in Molecular Biology

      Volume: 1768 Pages: 349-362

    • DOI

      10.1007/978-1-4939-7778-9_20

    • ISBN
      9781493977765, 9781493977789
    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] 一塩基置換をもつヒトiPS細胞の単離2017

    • Author(s)
      宮岡 佑一郎
    • Journal Title

      実験医学 2017年6月号

      Volume: 35 Pages: 1487-1493

    • Related Report
      2017 Annual Research Report
  • [Presentation] Genome Editing in Human iPS Cells to Cure and Study Disease2019

    • Author(s)
      Yuichiro Miyaoka
    • Organizer
      The 4th TransMed-VN Conference
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Precise Deletion Mutagenesis by Dual Cas12a DNA Cleavage2019

    • Author(s)
      Gou Takahashi, Hideto Mori, Soh Ishiguro, Nozomu Yachie, Yuichiro Miyaoka
    • Organizer
      Frontiers in Genome Engineering 2019
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Genome-Edited iPSC and Pig Cardiomyopathy Models Reveal Mutant RBM20 Forms Mislocalized Granules to Dominantly Disrupt Global Splicing2019

    • Author(s)
      Yuichiro Miyaoka, Kenneth Tan, Elena Matsa, Steven Mayerl, Amanda Chan, Vanessa Herrera, Aishwarya Kulkarni, Meenakshi Venkatasubramanian, Kashish Chetal, Han Sun, Francesca Briganti, Wu Wei, Saji Oommen, Daniel Carlson, Timothy Nelson, Lars Steinmetz, Jay Schneider, Bruce Conklin, Nathan Salomonis
    • Organizer
      ISSCR 2019 Annual Meeting
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ゲノム編集iPS細胞およびブタを用いたスプライシング因子RBM20の変異による心筋症発症機序の解析2019

    • Author(s)
      宮岡 佑一郎, Kenneth Tan, Elena Matsa, Steven Mayerl, Amanda Chan, Vanessa Herrera, Aishwarya Kulkarni, Meenakshi Venkatasubramanian, Kashish Chetal, Han Sun, Francesca Briganti Francesca, Wu Wei, Saji Oommen, Daniel Carlson, Timothy Nelson, Lars Steinmetz, Jay Schneider, Bruce Conklin, Nathan Salomonis
    • Organizer
      第4回 日本ゲノム編集学会年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] CRISPR/Cas9による相同組換え修復(HDR)を介した正確なゲノム編集を促進する条件の探索2018

    • Author(s)
      加藤-乾 朋子、高橋 剛、許 絲茵、宮岡 佑一郎
    • Organizer
      第91回 日本生化学会大会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Modified interactions between Cas9/Cas9 D10A nickase and genomic DNA enhances HDR2018

    • Author(s)
      Tomoko Kato, Gou Takahashi, Szuyin Hsu, Yuichiro Miyaoka
    • Organizer
      Cold Spring Harbor Laboratory, Genome Engineering: The CRISPR/Cas Revolution Meeting 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Cas9-DNA相互作用の改変によるゲノム編集の正確性向上は同時にHDR誘導活性も高める2018

    • Author(s)
      加藤-乾 朋子、高橋 剛、許 絲茵、宮岡 佑一郎
    • Organizer
      第3回 日本ゲノム編集学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Cas9とDNAの結合力が HDRとNHEJの活性を規定する2017

    • Author(s)
      加藤-乾 朋子、高橋 剛、許 絲茵、宮岡 佑一郎
    • Organizer
      日本ゲノム編集学会 第2回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ゲノム編集 ー基礎から応用までー2017

    • Author(s)
      宮岡 佑一郎
    • Organizer
      第39回日本生物学的精神医学会・第47回日本神経精神薬理学会 合同年会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Binding Affinity of Cas9 to DNA Determines Its HDR and NHEJ Activities2017

    • Author(s)
      Tomoko Kato, Gou Takahashi, Szuyin Hsu, and Yuichiro Miyaoka
    • Organizer
      CSHL Meeting Genome Engineering: The CRISPR-Cas Revolution
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Book] 今日からモノ知りシリーズ  トコトンやさしいゲノム編集の本2019

    • Author(s)
      宮岡 佑一郎
    • Total Pages
      160
    • Publisher
      日刊工業新聞社
    • ISBN
      4526079642
    • Related Report
      2018 Annual Research Report
  • [Remarks] 公益財団法人 東京都医学総合研究所 再生医療プロジェクト 宮岡研究室

    • URL

      https://www.igakuken-regmed.com/

    • Related Report
      2019 Annual Research Report
  • [Remarks] 未来を話そう!プロジェクト研究の紹介 再生医療プロジェクト

    • URL

      http://www.igakuken.or.jp/project/to-tomin/to-pro22.html

    • Related Report
      2019 Annual Research Report
  • [Remarks] 公益財団法人 東京都医学総合研究所 再生医療プロジェクト 宮岡研究室

    • URL

      https://www.igakuken-regmed.com/

    • Related Report
      2018 Annual Research Report 2017 Annual Research Report
  • [Remarks] 未来を話そう! プロジェクト研究の紹介 再生医療プロジェクト

    • URL

      http://www.igakuken.or.jp/project/to-tomin/to-pro22.html

    • Related Report
      2018 Annual Research Report 2017 Annual Research Report

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Published: 2017-04-28   Modified: 2021-02-19  

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