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Origin of Enzymes: Function and Structure of Hyperbranched Polymers

Research Project

Project/Area Number 17K01943
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Biomolecular chemistry
Research InstitutionTokyo Institute of Technology

Principal Investigator

Mamajanov Irena  東京工業大学, 地球生命研究所, 特任教授 (80776261)

Project Period (FY) 2017-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2019: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2018: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2017: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Keywordsorigin of life / chemical evolution / hyperbranched polymers / protoenzymes / hyperbranched polymer / polyester / wet-dry cycle / smart material / protoenzyme / biomimetic catalysis / hyperbranched polyesters / biomimetic catalysts / 生物活性物質の探索 / prebiotic chemistry
Outline of Final Research Achievements

1) Branched polyesters undergo chemical evolution under wet-dry cycles to form soluble hyperbranched structures. Cross-linked structures form without wet-dry cycling. 2) Hyperbranched polyesters are capable of supporting nanoparticles and form biomimetic enzyme-like catalysts. The systems has been tested for ZnS nanocrystals relevant to Zn World origin of life scenario. 3) Utilizing ester amide exchange reaction, we have shown that hyperbranched polyesters provide a template for non-random incorporation of amino acids into a depsipeptides suggesting the possible pathway to functional peptides in prebiotic chemistry. 4) Polyesters serve as membraneless compartments capable of encapsulating functional RNA.6) A new insight into origins of life: it would have been more efficient for species to form prior to the origin of life

Academic Significance and Societal Importance of the Research Achievements

For 70 years the origin of life field has been focused on the synthesis of biological molecules. The synthesis of biomolecules does not lead to the formation of life. It is important to look into dynamic processes of functional systems. This project successfully explored one such system.

Report

(5 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • 2018 Research-status Report
  • 2017 Research-status Report
  • Research Products

    (17 results)

All 2021 2020 2019 2018 2017

All Journal Article (11 results) (of which Int'l Joint Research: 10 results,  Peer Reviewed: 8 results,  Open Access: 9 results) Presentation (6 results) (of which Int'l Joint Research: 2 results,  Invited: 3 results)

  • [Journal Article] Incorporation of Basic α-Hydroxy Acid Residues into Primitive Polyester Microdroplets for RNA Segregation2021

    • Author(s)
      Tony Z. Jia, Niraja V. Bapat, Ajay Verma, Irena Mamajanov, H. James Cleaves II, and Kuhan Chandru*
    • Journal Title

      Biomacromolecules

      Volume: 22 Issue: 4 Pages: 1484-1493

    • DOI

      10.1021/acs.biomac.0c01697

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Origin of Species before Origin of Life: The Role of Speciation in Chemical Evolution2021

    • Author(s)
      Tony Z. Jia, Melina Caudan, Irena Mamajanov
    • Journal Title

      Life

      Volume: 11 Issue: 2 Pages: 154-154

    • DOI

      10.3390/life11020154

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Prebiotic oligomerization and self-assembly of structurally diverse xenobiological monomers2020

    • Author(s)
      Kuhan Chandru, Tony Z Jia, Irena Mamajanov, Niraja Bapat, H James Cleaves
    • Journal Title

      Scientific Reports

      Volume: 10 Issue: 1 Pages: 17560-17560

    • DOI

      10.1038/s41598-020-74223-5

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Protoenzymes: The case of hyperbranched polymer-scaffolded ZnS nanocrystals2020

    • Author(s)
      Irena Mamajanov, Melina Caudan, Tony Z Jia
    • Journal Title

      Life

      Volume: 10 Issue: 8 Pages: 150-150

    • DOI

      10.3390/life10080150

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Polyesters as a Model System for Building Primitive Biologies from Non-Biological Prebiotic Chemistry2020

    • Author(s)
      Chandru、Mamajanov、Cleaves、Jia
    • Journal Title

      Life

      Volume: 10 Issue: 1 Pages: 6-6

    • DOI

      10.3390/life10010006

    • Related Report
      2019 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Protoenzymes: The Case of Hyperbranched Polymer-Scaffolded ZnS Nanocrystals2020

    • Author(s)
      Mamajanov Irena、Caudan Melina、Jia Tony Z.
    • Journal Title

      Chemrxiv

      Volume: - Pages: 11938176-11938176

    • DOI

      10.26434/chemrxiv.11938176.v3

    • Related Report
      2019 Research-status Report
    • Open Access / Int'l Joint Research
  • [Journal Article] Wet-Dry Cycling Delays the Gelation of Hyperbranched Polyesters: Implications to the Origin of Life2019

    • Author(s)
      Mamajanov Irena
    • Journal Title

      Life

      Volume: 9 Issue: 3 Pages: 56-56

    • DOI

      10.3390/life9030056

    • Related Report
      2019 Research-status Report
  • [Journal Article] Wet-dry Cycling Delays the Gelation of Hyperbranched Polyesters: Implications to the Origin of Life2019

    • Author(s)
      Irena Mamajanov
    • Journal Title

      Preprints

      Volume: N/A Pages: 2019040297-2019040297

    • DOI

      10.20944/preprints201904.0297.v1

    • Related Report
      2018 Research-status Report
    • Open Access / Int'l Joint Research
  • [Journal Article] Simple prebiotic synthesis of high diversity dynamic combinatorial polyester libraries2018

    • Author(s)
      Kuhan Chandru, Nicholas Guttenberg, Chaitanya Giri, Yayoi Hongo, Christopher Butch, Irena Mamajanov & H. James Cleaves II
    • Journal Title

      Communications Chemistry

      Volume: 1 Issue: 1 Pages: 30-30

    • DOI

      10.1038/s42004-018-0031-1

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Selective Synthesis of Hyperbranched Polyesters under Wet-Dry Cycling Conditions2018

    • Author(s)
      Irena Mamajanov
    • Journal Title

      ALife

      Volume: 2018 Pages: 580-581

    • DOI

      10.1162/isal_a_00107

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Protoenzymes: the case of hyperbranched polyesters2017

    • Author(s)
      Irena Mamajanov, George D. Cody
    • Journal Title

      Philosophical Transactions of the Royal Society A

      Volume: 375 Issue: 2109 Pages: 20160357-20160357

    • DOI

      10.1098/rsta.2016.0357

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] Messy Chemistry Approach to Origins of Life2019

    • Author(s)
      Irena Mamajanov
    • Organizer
      Goldschmidt 2019
    • Related Report
      2019 Research-status Report
  • [Presentation] From Messy Chemistry to the Origins of Life2019

    • Author(s)
      Irena Mamajanov
    • Organizer
      LPI Habitability
    • Related Report
      2019 Research-status Report
  • [Presentation] From Messy Chemistry to the Origins of Life2019

    • Author(s)
      Irena Mamajanov
    • Organizer
      IISER Pune. Special mini-symposium on the origin of life
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] Rocks to Life: Messy Chemistry Approach to Evolution2018

    • Author(s)
      Irena Mamajanov
    • Organizer
      ALife 2018. Special workshop: Earth, Life and ALIFE
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Functional Non-Biopolymers and Their Implications for the Origins of Life2018

    • Author(s)
      Irena Mamajanov
    • Organizer
      Gordon Research Conference: Origins of Life, Galveston, TX, USA
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] Structure and Function of Hyperbranched Polyesters: Implications for for the Chemical Evolution2017

    • Author(s)
      Irena Mamajanov
    • Organizer
      Asia-Pacific International Chapters Conference, Jeju, South Korea
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research

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Published: 2017-04-28   Modified: 2022-01-27  

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