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Template photopolymerization using DNA

Research Project

Project/Area Number 17K05886
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Polymer chemistry
Research InstitutionUniversity of Hyogo

Principal Investigator

Nakamura Mitsunobu  兵庫県立大学, 工学研究科, 准教授 (50285342)

Project Period (FY) 2017-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2019: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2018: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2017: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords鋳型重合 / DNA / 分子集積体 / 光増感
Outline of Final Research Achievements

In order to investigate template photopolymerization using DNA, 1,4-diphenyl-1,3-butadiyne derivative having macrocyclic polyamine zinc (II) complexes, which act as a receptor for the thymine base in DNA, was prepared. UV-vis titration study of the butadiyne derivative with oligo-dT DNAs as a titrant showed that the butadiyne derivative could be assembled in the presence of oligo-dT DNA to form stacked butadiyne arrays. Upon photoirradiation of the butadiyne arrays, the absorption bands derived from butadiyne decreased with the increasing of the absorption band derived from photoproduct. The photoproduct was identified as a polymerized butadiyne derivative by using MALDI-TOF-MS spectroscopy. On the other hand, the photoirradiation of the butadiyne derivative in the absence of oligo-dT DNA yielded no photoproduct. Therefore, the butadiyne derivative can photopolymerize in the butadiyne arrays, the assembling with oligo-dT DNAs plays a critical function in the photopolymerization.

Academic Significance and Societal Importance of the Research Achievements

人工DNAを分子集積体の単なる鋳型材料だけでなく、分子量と立体規則性が制御された高分子の合成反応場へと展開できる。つまり、人工DNAの分子認識能を利用して、希薄溶液中の反応性分子を局所的に集積して反応を加速させる特殊反応場(触媒)としての機能を開拓できる点に学術的意義がある。さらに人工DNAの高分子合成の鋳型材料としての新しい機能が発見でき、ナノテクノロジーの魅力ある素材としての知識の蓄積に貢献できる。将来、すべてのDNA塩基に対して受容体を使った鋳型重合が実現できれば、塩基配列をプログラムした人工DNAを鋳型にすることにより、配列制御型の高分子合成への展開も期待できる。

Report

(4 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report
  • Research Products

    (34 results)

All 2020 2019 2018 2017 Other

All Journal Article (8 results) (of which Peer Reviewed: 8 results) Presentation (24 results) (of which Int'l Joint Research: 6 results,  Invited: 2 results) Book (1 results) Remarks (1 results)

  • [Journal Article] Controlling Pyrene Association in DNA Duplexes by B- to Z-DNA Transitions2019

    • Author(s)
      Nakamura Mitsunobu, Takada Tadao, Yamana Kazushige
    • Journal Title

      ChemBioChem

      Volume: 20 Issue: 23 Pages: 2949-2954

    • DOI

      10.1002/cbic.201900350

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Photocurrent enhancement by a local electric field on DNA-modified electrodes covered with gold nanoparticles2019

    • Author(s)
      Takada Tadao、Syunori Kazue、Nakamura Mitsunobu、Yamana Kazushige
    • Journal Title

      The Analyst

      Volume: 144 Issue: 21 Pages: 6193-6196

    • DOI

      10.1039/c9an01352k

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Chromophore Arrays Constructed in the Major Groove of DNA Duplexes Using a Post-Synthetic Strategy2019

    • Author(s)
      Mitsunobu Nakamura, Yuki Matsui, Tadao Takada, Kazushige Yamana
    • Journal Title

      ChemistrySelect

      Volume: 4 Issue: 4 Pages: 1525-1529

    • DOI

      10.1002/slct.201803464

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] Circularly polarized luminescence of helically assembled pyrene π-stacks on RNA and DNA duplexes2018

    • Author(s)
      Nakamura Mitsunobu、Ota Fuyuki、Takada Tadao、Akagi Kazuo、Yamana Kazushige
    • Journal Title

      Chirality

      Volume: 30 Issue: 5 Pages: 602-608

    • DOI

      10.1002/chir.22838

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] Photocurrent Enhancement in DNA-Scaffolded Chromophore-Aggregate-Functionalized Systems Containing Multiple Types of Chromophores2018

    • Author(s)
      Nakamura Mitsunobu、Jomura Ayumi、Takada Tadao、Yamana Kazushige
    • Journal Title

      ChemPhotoChem

      Volume: 2 Issue: 2 Pages: 89-94

    • DOI

      10.1002/cptc.201700152

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Ferrocene conjugated oligonucleotide for electrochemical detection of DNA base mismatch2017

    • Author(s)
      Hasegawa Yusuke、Takada Tadao、Nakamura Mitsunobu、Yamana Kazushige
    • Journal Title

      Bioorganic & Medicinal Chemistry Letters

      Volume: 27 Issue: 15 Pages: 3555-3557

    • DOI

      10.1016/j.bmcl.2017.05.049

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Photoresponsive Electrodes Modified with DNA Duplexes Possessing a Porphyrin Dimer2017

    • Author(s)
      Takada Tadao、Iwaki Toshihiro、Nakamura Mitsunobu、Yamana Kazushige
    • Journal Title

      Chemistry - A European Journal

      Volume: 23 Issue: 72 Pages: 18258-18263

    • DOI

      10.1002/chem.201704281

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] A Luminescent Perylenediimide as a Binding Ligand for Pyrimidine/Pyrimidine Mismatches Within a DNA Duplex2017

    • Author(s)
      Takada Tadao、Umakoshi Yu、Nakamura Mitsunobu、Yamana Kazushige
    • Journal Title

      ChemistrySelect

      Volume: 2 Issue: 21 Pages: 6047-6051

    • DOI

      10.1002/slct.201701310

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Presentation] DNAの構造転移を利用したピレンの会合制御2020

    • Author(s)
      鵜野功大、中村光伸、高田忠雄、山名一成
    • Organizer
      日本化学会 第100春季年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Construction and Photoelectric Property of DNA Templated Chromophore Arrays2019

    • Author(s)
      Mitsunobu Nakamura, Tadao Takada, Kazushige Yamana
    • Organizer
      International Conference on Photocatalysis and Photoenergy 2019
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] DNAに構築したテトラフェニルエテン集積体の凝集誘起発光2019

    • Author(s)
      松井悠貴、中村光伸、高田忠雄、山名一成
    • Organizer
      第65回 高分子研究発表会(神戸)
    • Related Report
      2019 Annual Research Report
  • [Presentation] DNA上のピレン会合体の制御とその蛍光挙動2019

    • Author(s)
      鵜野功大、中村光伸、高田忠雄、山名一成
    • Organizer
      第65回 高分子研究発表会(神戸)
    • Related Report
      2019 Annual Research Report
  • [Presentation] 二重鎖DNAに構築したテトラフェニルエテン会合体の凝集誘起発光2019

    • Author(s)
      松井悠貴、中村光伸、高田忠雄、山名一成
    • Organizer
      2019年光化学討論会
    • Related Report
      2019 Annual Research Report
  • [Presentation] チアゾールオレンジ集積体を有する蛍光核酸プローブの開発2019

    • Author(s)
      高田忠雄、西田航磨、中野葵、中村光伸、山名一成
    • Organizer
      2019年光化学討論会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Helically arranged chromophore clusters on DNA as a fluorogenic biosensor for nucleic acid detection2019

    • Author(s)
      Tadao Takada, Koma Nishida, Aoi Nakano, Mitsunobu Nakamura, Kazushige Yamana
    • Organizer
      The 46th International Symposium on Nucleic Acids Chemistry
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ジフェニルブタジイン誘導体のDNAによる集積化2019

    • Author(s)
      松本明大、洪怜奈、中村光伸、高田忠雄、山名一成
    • Organizer
      日本化学会第99春季年会
    • Related Report
      2018 Research-status Report
  • [Presentation] B-Z転移におけるピレン修飾DNAの蛍光特性2019

    • Author(s)
      中濵希汐、中村光伸、高田忠雄、山名一成
    • Organizer
      日本化学会第99春季年会
    • Related Report
      2018 Research-status Report
  • [Presentation] DNA上に構築したテトラフェニルエテン集積体2019

    • Author(s)
      松井悠貴、中村光伸、高田忠雄、山名一成
    • Organizer
      日本化学会第99春季年会
    • Related Report
      2018 Research-status Report
  • [Presentation] "Signal-On"型電気化学核酸検出プローブの開発2019

    • Author(s)
      西村弘基、高田忠雄、山下智也、中村光伸、山名一成
    • Organizer
      日本化学会第99春季年会
    • Related Report
      2018 Research-status Report
  • [Presentation] シアニン集積体を有する核酸の発光特性2019

    • Author(s)
      西田航磨、高田忠雄、本多由理佳、中村光伸、山名一成
    • Organizer
      日本化学会第99春季年会
    • Related Report
      2018 Research-status Report
  • [Presentation] DNAを鋳型に用いたジフェニルブタジイン誘導体の集積と光重合2018

    • Author(s)
      松本明大、壷井啓太、中村光伸、高田忠雄、山名一成
    • Organizer
      第64回高分子研究発表会(神戸)
    • Related Report
      2018 Research-status Report
  • [Presentation] DNAに構築したピレン集積体の構造制御と蛍光挙動2018

    • Author(s)
      中濵希汐、中村光伸、高田忠雄、山名一成
    • Organizer
      第64回高分子研究発表会(神戸)
    • Related Report
      2018 Research-status Report
  • [Presentation] ピレン修飾i-motif DNAの蛍光挙動2018

    • Author(s)
      松井悠貴、中村光伸、高田忠雄、山名一成
    • Organizer
      第64回高分子研究発表会(神戸)
    • Related Report
      2018 Research-status Report
  • [Presentation] 二重鎖DNAに構築されたピレン集積体の蛍光に及ぼす金属イオン効果2018

    • Author(s)
      中村光伸、高田忠雄、山名一成
    • Organizer
      2018年光化学討論会
    • Related Report
      2018 Research-status Report
  • [Presentation] Signal-on electrochemical sensors utilizing pillar electrodes modified with nucleic acid redox probes2018

    • Author(s)
      Hiroki Nishimura, Tadao Takada, Tomoya Yamashita, Mitsunobu Nakamura, Kazushige Yamana
    • Organizer
      The 45th International Symposium on Nucleic Acids Chemistry
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] Fluorescent nucleic acids modified with stacked cyanine dyes2018

    • Author(s)
      Koma Nishida, Tadao Takada, Aoi Nakano, Mitsunobu Nakamura, Kazushige Yamana
    • Organizer
      The 45th International Symposium on Nucleic Acids Chemistry
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] Photocurrent systems using DNA-scaffolded chromophore-aggregates2018

    • Author(s)
      除村あゆみ、中村光伸、高田忠雄、山名一成
    • Organizer
      日本化学会 第98春季年会
    • Related Report
      2017 Research-status Report
  • [Presentation] シアニン色素を構造内部に有する発光性核酸プローブの開発2018

    • Author(s)
      西田航磨、高田忠雄、本多由理佳、中村光伸、山名一成
    • Organizer
      日本化学会 第98春季年会
    • Related Report
      2017 Research-status Report
  • [Presentation] "Signal-On"型電気化学核酸プローブを利用した標的核酸検出センサーの開発2018

    • Author(s)
      西村弘基、高田忠雄、山下智也、中村光伸、山名一成
    • Organizer
      日本化学会 第98春季年会
    • Related Report
      2017 Research-status Report
  • [Presentation] Pyrene-aggregates on double stranded RNA emitting circularly polarized luminescence2017

    • Author(s)
      Mitsunobu Nakamura, Junpei Suzuki, Tadao Takada, Kazushige Yamana
    • Organizer
      The 13th Korea-Japan Symposium on Frontier Photoscience
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Artificial Nucleic Acid Probes Possessing Stacked Fluorescent Chromophores2017

    • Author(s)
      Tadao Takada, Aoi Nakano, Shunya Ishino, Yurika Honda, Mitsunobu Nakamura, Kazushige Yamana
    • Organizer
      The 44th International Symposium on Nucleic Acids Chemistry
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] DNA上のピレン集積体の構造変換と蛍光挙動2017

    • Author(s)
      中村光伸、高田忠雄、山名一成
    • Organizer
      2017年光化学討論会講演
    • Related Report
      2017 Research-status Report
  • [Book] "Templated Arrays of Multichromophores and Oligonucleotides Supported by Metal Interactions and Their Functional Relevance" in Templated DNA Nanotechnology - Functional DNA Nanoarchitectonics2019

    • Author(s)
      Mitsunobu Nakamaura, Tadao Takada, Kazushige Yamanan (Ed; Tgraju Gonvindaraju)
    • Total Pages
      426
    • Publisher
      Pan Stanford Publishing
    • ISBN
      9789814800211
    • Related Report
      2018 Research-status Report
  • [Remarks] 兵庫県立大学工学研究科 生体関連化学グループ

    • URL

      http://www.eng.u-hyogo.ac.jp/msc/msc1/index.html

    • Related Report
      2019 Annual Research Report 2018 Research-status Report 2017 Research-status Report

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Published: 2017-04-28   Modified: 2021-02-19  

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