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Imaging analysis for nuclear dynamics in structural change of nuclei in early embryo and differentiation.

Research Project

Project/Area Number 17K07241
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Genome biology
Research InstitutionHiroshima University

Principal Investigator

Sakamoto Naoaki  広島大学, 統合生命科学研究科(理), 准教授 (00332338)

Project Period (FY) 2017-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2019: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2018: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2017: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywordsウニ / 核内構造 / ゲノム編集 / CRISPR-Cas9 / ポリケチド合成酵素 / 初期型ヒストン遺伝子 / CenpA / Nucleolin / HP1 / 核構造 / ライブイメージング / ゲノム / 細胞核 / 発生
Outline of Final Research Achievements

We found that early histone genes are transcriptionally active during morula stage and that multiple early histone gene loci interact each other during this stage. Furthermore, transcriptional active state of these gene loci is involved in this chromosomal interactions. For live imaging analysis of these loci, we attempted to establish the CRISPR-Cas9 system and achieved 100% knockout efficiency in sea urchin embryos using CRISPR-Cas9. Currently, we constructed a imaging tool based on this Cas9 that is available for sea urchin and the tuning of this tool is still ongoing. In addition, we analyzed the intranuclear structure of sea urchin embryos by using fluorescent proteins and found that the centromere showed a biased distribution in the nucleus like Rabl configuration and that multiple spots of the nucleolus tended to be close together.

Academic Significance and Societal Importance of the Research Achievements

遺伝子を取り巻く核内環境の変化が劇的に変化するウニ初期胚において、遺伝子の活性状態と染色体間相互作用が関連しているのは、非常に興味深いと思われる。また、CRISPR-Cas9システムによる効率的ゲノム編集法がバフンウニで確立できたことは、各種海産動物の育種においてもこのCRISPR-Cas9システムが応用可能であることを示唆しており、興味深い。

Report

(4 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report
  • Research Products

    (7 results)

All 2019 2018 2017

All Journal Article (4 results) (of which Peer Reviewed: 4 results,  Open Access: 1 results) Presentation (3 results)

  • [Journal Article] Establishment of knockout adult sea urchins by using a CRISPR‐Cas9 system2019

    • Author(s)
      Daming Liu, Akinori Awazu, Tetsushi Sakuma, Takashi Yamamoto, Naoaki Sakamoto
    • Journal Title

      Development Growth and Regeneration

      Volume: 61 Issue: 6 Pages: 378-388

    • DOI

      10.1111/dgd.12624

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Insulator Activities of Nucleosome-Excluding DNA Sequences without Bound Chromatin Looping Proteins2019

    • Author(s)
      Matsushima Yuki、Sakamoto Naoaki、Awazu Akinori
    • Journal Title

      The Journal of Physical Chemistry B

      Volume: 123 Issue: 5 Pages: 1035-1043

    • DOI

      10.1021/acs.jpcb.8b10518

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] Biased genome editing using the local accumulation of DSB repair molecules system.2018

    • Author(s)
      Nakade S, Mochida K, Kunii A, Nakamae K, Aida T, Tanaka K, Sakamoto N, Sakuma T, Yamamoto T
    • Journal Title

      Nature Communications

      Volume: 9(1) Issue: 1 Pages: 3270-3270

    • DOI

      10.1038/s41467-018-05773-6

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Dynamic changes in the interchromosomal interaction of early histone gene loci during development of sea urchin2017

    • Author(s)
      Matsushita Masaya、Ochiai Hiroshi、Suzuki Ken-ichi T.、Hayashi Sayaka、Yamamoto Takashi、Awazu Akinori、Sakamoto Naoaki
    • Journal Title

      Journal of Cell Science

      Volume: 130 Issue: 24 Pages: 4097-4107

    • DOI

      10.1242/jcs.206862

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Presentation] Establishment of knockout adult sea urchin by using CRISPR-Cas9 system2019

    • Author(s)
      Liu D, Awazu A, Sakuma T, Yamamoto T, Sakamoto N
    • Organizer
      日本ゲノム編集学会第4 回大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] ウニ初期胚発生における核内染色体の動的構造変化および細胞特異的変化2019

    • Author(s)
      安井 優平
    • Organizer
      日本動物学会第90回大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] CRISPR/Cas9システムを用いたバフンウニにおけるゲノム編集2018

    • Author(s)
      Liu Daming, 粟津暁紀, 佐久間哲史, 山本卓, 坂本尚昭
    • Organizer
      第41回 日本分子生物学会
    • Related Report
      2018 Research-status Report

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Published: 2017-04-28   Modified: 2021-02-19  

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