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Analysis of enhanced protein production mediated by 5'-UTR intron

Research Project

Project/Area Number 17K08198
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Applied molecular and cellular biology
Research InstitutionYamaguchi University

Principal Investigator

HOSHIDA Hisashi  山口大学, 大学院創成科学研究科, 准教授 (00314823)

Project Period (FY) 2017-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2019: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2018: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2017: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Keywordsイントロン / IME / スプライシング / Saccharomyces cerevisiae / ルシフェラーゼ / 最適化コドン / 酵母最適化コドン / タンパク質生産 / 発現増強 / プロモーター領域 / 酵母 / 応用微生物
Outline of Final Research Achievements

The essential sequence in an intron for, a sequence in a expressed gene related to, and genes involved in intron-mediated enhancement (IME) were analyzed in Saccharomyces cerevisiae.
Most of mutations in the sequences conserved among introns in S. cerevisiae lost IME. These conserved sequences are essential for splicing. However, a mutation in the 3’ conserved sequence showed IME comparable to wild-type sequence. An RT-PCR analysis revealed that the 3’ mutant was not spliced. In addition, other several deletions in a non-conserved region showed IME but were not spliced. These results indicated that splicing is not necessary for IME. The genes involved in IME including basal repression of gene expression were screened using a knockout strain collection of S. cerevisiae. As a result, several genes were identified. Some of the genes affected mRNA accumulation but the others did not, indicating that the genes function in different steps of gene expression process.

Academic Significance and Societal Importance of the Research Achievements

本研究により,発現増強にとって必ずしもスプライシングが必要ないことを明らかにした。また,発現増強機能の解明には関わる遺伝子を同定しそれら遺伝子の機能を明らかにすることが必要であり,本研究で発現増強および基本的な発現抑制に関与する遺伝を同定したことで,IMEのメカニズムの一端が明らかになり,さらなる解明を進めることが可能になった。
現在,人工設計した合成遺伝子を用いた物質生産細胞の構築が盛んになってきている。遺伝子設計において,設計遺伝子が発現することは必須である。本研究で明らかにした発現抑制配列は,その完全な理解には至っていないものの,今後の遺伝子設計にとっての重要な知見である。

Report

(4 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report
  • Research Products

    (5 results)

All 2020 2019 2018

All Presentation (5 results) (of which Int'l Joint Research: 2 results)

  • [Presentation] Saccharomyces cerevisiaeにおけるイントロンによるタンパク質発現増強に関与する遺伝子のゲノムワイドスクリーニング2020

    • Author(s)
      菊田 浩希,星田 尚司,赤田 倫治
    • Organizer
      2020年度日本農芸化学会大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] イントロンによる発現増強を受けるルシフェラーゼコーディング領域内配列の解析2019

    • Author(s)
      菊田 浩希, 星田尚司, 赤田 倫治
    • Organizer
      第71回日本生物工学会大会(2019)
    • Related Report
      2019 Annual Research Report
  • [Presentation] Screening for the genes affecting intron-mediated enhancement using a Saccharomyces cerevisiae knockout strain collection2019

    • Author(s)
      Hiroki Kikuta, Hisashi Hoshida, Rinji Akada
    • Organizer
      The 16th Young Scientist Seminar Establishment of international networking for tropical bioresources and their utilization
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Mutational analysis of 5’-UTR intron revealed that splicing is not necessary for intron-mediated expression enhancement in Saccharomyces cerevisiae.2018

    • Author(s)
      Hisashi Hoshida, Satoshi Goto, Masaki Kondo, Rinji Akada
    • Organizer
      Yeast Genetics Meeting
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] 酵母Saccharomyces cerevisiaeにおいてタンパク質発現を増強させるイントロン配列の解析2018

    • Author(s)
      後藤聡志,近藤真樹,星田尚司,赤田倫治
    • Organizer
      日本農芸化学会2018年度大会,3A08a02,3月17日,名古屋市
    • Related Report
      2017 Research-status Report

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Published: 2017-04-28   Modified: 2021-02-19  

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