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Energy-resolved tandem mass spectrometry for in-situ differentiation and identification of isomers

Research Project

Project/Area Number 17K08262
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Physical pharmacy
Research InstitutionInstitute of Physical and Chemical Research

Principal Investigator

Nakamura Takemichi  国立研究開発法人理化学研究所, 環境資源科学研究センター, 特別嘱託研究員 (10360611)

Project Period (FY) 2017-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2019: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2018: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2017: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
KeywordsEnergy-resolved MS/MS / Isomer Differentiation / Breakdown Diagram / CID / Computational Chemistry / Fragmentation Mechanism / Ion Mobility / Collision Cross Section / Protonated Amino Acid / Activation Barrier / Chemical Fingerprinting / Collision Gas Pressure / 分析科学 / 質量分析 / 異性体識別 / 衝突活性化解離 / 活性化エネルギー
Outline of Final Research Achievements

A proof of principle study of energy-resolved tandem mass spectrometry (ER-MS/MS) for differentiation and identification of isomeric small organic molecules has been carried out. The potential utility of breakdown diagrams for fingerprinting of organic molecules was shown. In the meantime, we've developed a new method for acquiring ER-MS/MS data more efficiently with a Q-TOF instrument to accelerate data accumulation.
On the other hand, we had only limited successes in our attempts to establish a method for scaling collision energy axis of breakdown diagrams and to quantitatively model fragmentation pathways and energetics based on computational chemistry. It turned out our current model on CID and fragmentation process is not good enough for quantitative evaluation. We need to refine our models and further accumulation of the experimental data will be required for future, as well.

Academic Significance and Societal Importance of the Research Achievements

化学分析法として迅速かつ極めて高感度であるという特性を持つ質量分析は,有機化合物の定性,定量に広く用いられ,近年,医学や薬学等への応用との関連でも注目を集めているメタボローム解析等の新しい応用分野においても必須の分析法となっている.しかし,質量分析のみでは化合物の定性,特に異性体の識別・同定が困難であるという点が現実世界への応用展開を阻害するボトルネックの一つなっている.本研究により,クロマトグラフィーを用いることのできない局所分析等において深刻な異性体識別・同定を実現する新しい方法論の基盤を確立できたので,これを更に発展させることで,応用展開の加速が期待される.

Report

(5 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • 2018 Research-status Report
  • 2017 Research-status Report
  • Research Products

    (10 results)

All 2019 2018 2017

All Journal Article (2 results) (of which Peer Reviewed: 2 results,  Open Access: 2 results) Presentation (8 results) (of which Int'l Joint Research: 3 results,  Invited: 3 results)

  • [Journal Article] An integrated screening system for the selection of exemplary substrates for natural and engineered cytochrome P450s2019

    • Author(s)
      Kanoh Naoki, Kawamata-Asano Ayano, Suzuki Kana, Takahashi Yusuke, Miyazawa Takeshi, Nakamura Takemichi, Moriya Takashi, Hirano Hiroyuki, Osada Hiroyuki, Iwabuchi Yoshiharu, Takahashi Shunji
    • Journal Title

      Scientific Reports

      Volume: 9 Issue: 1 Pages: 18023-18023

    • DOI

      10.1038/s41598-019-54473-8

    • Related Report
      2019 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Increased metabolite production by deletion of an HDA1-type histone deacetylase in the phytopathogenic fungi, Magnaporthe oryzae (Pyricularia oryzae) and Fusarium asiaticum.2017

    • Author(s)
      2.Maeda K., Izawa M., Nakajima Y., Jin Q., Hirose T., Nakamura T., Koshino H., Kanamaru K., Ohsato S., Kamakura T., Kobayashi T., Yoshida M., Kimura M.
    • Journal Title

      Lett. Appl. Microbiol.

      Volume: 65 Issue: 5 Pages: 446-452

    • DOI

      10.1111/lam.12797

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Do we have chemistry? MS/MS in anticipation or in reality2019

    • Author(s)
      Takemichi Nakamura
    • Organizer
      22nd International Conference on Secondary Ion Mass Spectrometry
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Do We Have Chemistry? Deciphering MS/MS Data of Small Molecules to Recognize the Chemistry Behind2019

    • Author(s)
      Takemichi Nakamura
    • Organizer
      4th International Symposium of the Kyoto Biomolecular Mass Spectrometry Society
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] An Efficient Way to Capture Energy-Resolved Tandem Mass Spectrometry Data for Fingerprinting Small Molecules2019

    • Author(s)
      中村健道
    • Organizer
      第67回質量分析総合討論会
    • Related Report
      2019 Research-status Report
  • [Presentation] エネルギー分解MS/MSを用いた小分子異性体識別同定に向けたアプローチ2018

    • Author(s)
      中村健道
    • Organizer
      第66回質量分析総合討論会
    • Related Report
      2018 Research-status Report
  • [Presentation] MS/MS 測定とスペクトル解析の基礎の基礎2018

    • Author(s)
      中村健道
    • Organizer
      第45回BMSコンファレンス
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] An energy-resolved tandem mass spectrometry approach towards identification of small isomeric metabolites2018

    • Author(s)
      Takemichi Nakamura
    • Organizer
      22nd International Mass Spectrometry Conference
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] エネルギー分解タンデム質量分析法の小分子異性体識別同定への利用:C4アミノ酸2017

    • Author(s)
      中村健道,須田康明,佐藤太
    • Organizer
      第65回質量分析総合討論会
    • Related Report
      2017 Research-status Report
  • [Presentation] フラグメンテーションの基礎と MS/MS2017

    • Author(s)
      中村健道
    • Organizer
      日本質量分析学会材料分析部会第1回研究会
    • Related Report
      2017 Research-status Report
    • Invited

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Published: 2017-04-28   Modified: 2022-01-27  

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