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Mechanisms of dead cell DNA degradation and cell-free DNA generation

Research Project

Project/Area Number 17K08891
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Immunology
Research InstitutionTokyo University of Science

Principal Investigator

Mizuta Ryushin  東京理科大学, 研究推進機構生命医科学研究所, 教授 (50297628)

Project Period (FY) 2017-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2019: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2018: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2017: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
KeywordsDNase γ / DNase1L3 / CAD / ネクローシス / アポトーシス / cfDNA / NETS / liquide biopsy / DNaseγ / DNase I / liquid biopsy / DNaseⅠ / NET / DNase1l3 / DNase1 / 好中球 / 遺伝子 / 核酸 / 癌 / 細胞 / 免疫学
Outline of Final Research Achievements

Cell-free DNA (cfDNA) (e.g. fetal- or tumor-derived DNA) is DNA found in the blood circulation. It is now widely investigated as a biomarker for prenatal screening, tumor diagnosis, and tumor monitoring as “liquid biopsies”. However, the biological and biochemical aspects of cfDNA remain unclear. Although cfDNA is considered to be mainly derived from dead cells, information is scarce as to whether it is apoptotic or necrotic and what kinds of endonucleases or DNases are involved. We induced in vivo hepatocyte necrosis and apoptosis in mice deficient in DNase γ (also named DNase1L3) and/or caspase-activated DNase (CAD) genes with acetaminophen overdose and anti-Fas antibody treatments. We found that (i) DNase γ was the endonuclease responsible for generating cfDNA in acetaminophen-induced hepatocyte necrosis and (ii) CAD and DNase γ cooperated in producing cfDNA for anti-Fas mediated hepatocyte apoptosis.

Academic Significance and Societal Importance of the Research Achievements

2つのDNA切断酵素CADおよびDNaseγがcfDNA の生成に関与することが明らかになったことより、酵素の特異性をふまえたcfDNAの評価ならびに精製プロトコールの作製に寄与するものと期待される。また、DNaseγが血流中に漏出したDNAを最初に分解する酵素であることが明らかになったことより、DNAを骨格として形成された血栓の治療に有効であること、またそのような血栓を足場として広がるがん細胞の転移の抑制にも応用できる可能性が示唆された。

Report

(4 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report
  • Research Products

    (21 results)

All 2020 2019 2018 2017 Other

All Int'l Joint Research (2 results) Journal Article (8 results) (of which Int'l Joint Research: 1 results,  Open Access: 3 results,  Peer Reviewed: 4 results) Presentation (10 results) Remarks (1 results)

  • [Int'l Joint Research] Medical Center Hamburg-Eppendorf(Germany)

    • Related Report
      2017 Research-status Report
  • [Int'l Joint Research] Karolinska Institute(Sweden)

    • Related Report
      2017 Research-status Report
  • [Journal Article] Linker histone H1 determines cell stiffness and differentiation.2020

    • Author(s)
      Kijima M, Yamagish H, Kawano R, Konishi T, Okumura T, Hayase M, Mizuta R.
    • Journal Title

      BioRxiv

      Volume: -

    • DOI

      10.1101/2020.01.21.914770

    • Related Report
      2019 Annual Research Report
    • Open Access
  • [Journal Article] DNase γ-dependent DNA fragmentation causes karyolysis in necrotic hepatocyte2020

    • Author(s)
      Takada S, Watanabe T, Mizuta R.
    • Journal Title

      Journal of Veterinary Medical Science

      Volume: 82 Issue: 1 Pages: 23-26

    • DOI

      10.1292/jvms.19-0499

    • NAID

      130007783762

    • ISSN
      0916-7250, 1347-7439
    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Cell-free DNA in blood circulation is generated by DNase1L3 and caspase-activated DNase.2019

    • Author(s)
      Watanabe T, Takada S, Mizuta R.
    • Journal Title

      BIOCHEM. BIOPH. RES. CO.

      Volume: 516 Issue: 3 Pages: 790-795

    • DOI

      10.1016/j.bbrc.2019.06.069

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Histone H1 quantity determines the efficiency of chromatin condensation in both apoptotic and live cells2019

    • Author(s)
      Marie Kijima, Hiroyuki Yamagishi, Yasushi Hara, Mai Kasai, Yasunari Takami, Hiroshi Takemura, Yusuke Miyanari, Yoichi Shinkai, Ryushin Mizuta
    • Journal Title

      BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

      Volume: 512 Issue: 2 Pages: 202-207

    • DOI

      10.1016/j.bbrc.2019.03.030

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] 細胞死におけるDNase γの役割2019

    • Author(s)
      水田龍信
    • Journal Title

      臨床免疫・アレルギー科

      Volume: 71 Pages: 114-119

    • Related Report
      2018 Research-status Report
  • [Journal Article] 2018年ノーベル生理学・医学賞 免疫抑制解除による新規がん治療法の開発2019

    • Author(s)
      水田龍信
    • Journal Title

      理大科学フォーラム

      Volume: 36 Pages: 28-29

    • Related Report
      2018 Research-status Report
  • [Journal Article] 細胞死に学ぶ生体の「もの壊し」の知恵と疾患ーDNAはいかにして分解されていくか2018

    • Author(s)
      水田龍信
    • Journal Title

      理大科学フォーラム

      Volume: 35 Pages: 34-39

    • NAID

      40021694688

    • Related Report
      2018 Research-status Report
  • [Journal Article] Host DNases prevent vascular occlusion by neutrophil extracellular traps2017

    • Author(s)
      Jimenez-Alcazar Miguel、Rangaswamy Chandini、Panda Rachita、Bitterling Josephine、Simsek Yashin J.、Long Andy T.、Bilyy Rostyslav、Krenn Veit、Renn? Christoph、Renn? Thomas、Kluge Stefan、Panzer Ulf、Mizuta Ryushin、Mannherz Hans Georg、Kitamura Daisuke、Herrmann Martin、Napirei Markus、Fuchs Tobias A.
    • Journal Title

      Science

      Volume: 358 Issue: 6367 Pages: 1202-1206

    • DOI

      10.1126/science.aam8897

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] DNase1L3とCaspase-activated DNaseがcell-free DNAを生成する.2019

    • Author(s)
      高田周平、渡邊大樹、水田龍信
    • Organizer
      第42回日本分子生物学会年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 餌の違いによる薬剤感受性の違いとその原因の解明.2019

    • Author(s)
      渡邊太樹、高田周平、小野里磨優、福島健、水田龍信
    • Organizer
      第42回日本分子生物学会年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 血液中cell-free DNA 生成のメカニズムの解明.2019

    • Author(s)
      水田龍信、渡邊大樹、高田周平
    • Organizer
      第28回日本Cell Death 学会学術集会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 肝細胞死におけるcell-free DNA生成のメカニズム.2019

    • Author(s)
      水田龍信、渡邊大樹、高田周平
    • Organizer
      第26回肝細胞研究会
    • Related Report
      2019 Annual Research Report
  • [Presentation] DNase γはネクローシスの際のcell-free DNA生成に主要な役割を担う2018

    • Author(s)
      渡邊大樹、高田周平、木島真理恵、河野莉穂、水田龍信
    • Organizer
      第41回日本分子生物学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] ネクローシス下のcell-free DNA 生成におけるDNase γの関与2018

    • Author(s)
      渡邊大樹、木島真理恵、河野莉穂、高田周平、水田龍信
    • Organizer
      第27回日本Cell Death 学会学術集会
    • Related Report
      2018 Research-status Report
  • [Presentation] 肝細胞死におけるcell-free DNA 生成のメカニズム2018

    • Author(s)
      水田龍信、渡邊大樹、高田周平、木島真理恵、河野莉穂
    • Organizer
      第25回肝細胞研究会
    • Related Report
      2018 Research-status Report
  • [Presentation] 細胞死DNA断片化とクロマチン凝集の生成メカニズムと生理的意義2017

    • Author(s)
      木島真理恵、河野莉穂、渡邊太樹、水田龍信
    • Organizer
      2017年度生命科学系学会合同年次大会
    • Related Report
      2017 Research-status Report
  • [Presentation] DNA断片化とクロマチン凝集の生成メカニズムと生理的意義2017

    • Author(s)
      水田龍信、木島真理恵、河野莉穂, 渡邊太樹
    • Organizer
      第26回日本Cell Death 学会学術集会
    • Related Report
      2017 Research-status Report
  • [Presentation] 肝細胞ネクローシスにおけるcell-free DNA生成のメカニズム2017

    • Author(s)
      水田龍信、木島真理恵、河野莉穂
    • Organizer
      第24回肝細胞研究会
    • Related Report
      2017 Research-status Report
  • [Remarks] 研究紹介

    • URL

      http://www.ribs.tus.ac.jp/wp-content/uploads/mizuta_hp.pdf

    • Related Report
      2017 Research-status Report

URL: 

Published: 2017-04-28   Modified: 2021-02-19  

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