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Predicting severity of lifestyle-related diseases by integrating time-series health records with human genome and metagenome data

Research Project

Project/Area Number 17K12647
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Statistical science
Research InstitutionThe University of Tokyo

Principal Investigator

Hasegawa Takanori  東京大学, 医科学研究所, 助教 (80753756)

Project Period (FY) 2017-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥2,860,000 (Direct Cost: ¥2,200,000、Indirect Cost: ¥660,000)
Fiscal Year 2018: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2017: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywords統計的時系列解析 / 状態空間モデル / リスク予測 / ゲノムデータ / 腸内細菌叢ゲノム / 健康診断データ / 統計科学 / 生体生命情報学 / 健康情報学 / 計算機統計学 / 応用統計学
Outline of Final Research Achievements

In recent years, in many developed countries including Japan, an increase in the ratio of elderly people to the total population and an increase in patients with lifestyle-related diseases have become a global issue. Through the improvement and extension of existing risk prediction methods for heart disease whose research has been advanced mainly in western countries, we newly develop a risk prediction method for japanese population that integrates genome and bacterial flora metagenomic data. In particular, we developed a statistical time series analysis method with high prediction accuracy, taking into account non-linear effects of vital values for lifestyle related diseases.

Academic Significance and Societal Importance of the Research Achievements

世界的に大きな注目を浴びる生活習慣病の早期リスク予測手法の開発に対して,データ同化手法を適用することで重篤化のシミュレートを行い,状態推定とリスク予測を行う点に特色がある.また本研究は臨床応用へのインパクトが高いと思われる.アジア人に対する慢性疾患のリスク予測手法の開発は遅れており,指標の提案は高齢化先進国と呼ばれる日本のみならず,今後高齢化が加速するアジア圏内において1つの重要な指標として取り入れられる可能性がある.

Report

(3 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • Research Products

    (3 results)

All 2018 2017

All Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (2 results) (of which Invited: 2 results)

  • [Journal Article] Time-Series Filtering for Replicated Observations via a Kernel Approximate Bayesian Computation2018

    • Author(s)
      T. Hasegawa, K. Kojima, Y. Kawai, and M. Nagasaki
    • Journal Title

      IEEE Transactions on Signal Processing

      Volume: 66(23) Issue: 23 Pages: 6148-6161

    • DOI

      10.1109/tsp.2018.2872864

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Presentation] 状態空間モデルを用いた時系列ヘルスケアデータの解析と応用2018

    • Author(s)
      長谷川嵩矩
    • Organizer
      統計関連学会連合
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] L1 正則化付き状態空間モデルを用いた健診結果の将来予測2017

    • Author(s)
      長谷川嵩矩
    • Organizer
      2017年度統計関連学会連合大会
    • Related Report
      2017 Research-status Report
    • Invited

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Published: 2017-04-28   Modified: 2020-03-30  

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