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Molecular basis underlying cancer cell proliferation and T-cell anergy induction by diacylglycerol kinase alpha

Research Project

Project/Area Number 17K15444
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Biological pharmacy
Research InstitutionKyushu University (2018)
Chiba University (2017)

Principal Investigator

Takahashi Daisuke  九州大学, 薬学研究院, 助教 (70791523)

Research Collaborator Sakane Fumio  
Project Period (FY) 2017-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2018: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2017: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Keywordsジアシルグリセロールキナーゼ / 脂質キナーゼ / マルチドメイン蛋白質 / 構造解析 / 昆虫細胞・バキュロウイルス / EFハンド / DGK / 立体構造解析 / EFハンドモチーフ / がん免疫 / 脂質代謝酵素 / シグナル伝達 / 細胞内情報伝達 / シグナル脂質 / 相互作用ネットワーク
Outline of Final Research Achievements

Diacylglycerol kinases (DGKs) modulate the levels of lipid messenger, DG and PA, thus function as a molecular hub for cellular signaling. To date, however, little progress has been made for the structural biology of DGKs including the structural basis for its catalytic function and regulation. In this study, we have produced a full-length DGKα using baculovirus-insect cell expression system. The purified protein was found to be a monomer and enzymatically active, demonstrating that this approach is very promising to produce DGKα for future functional and structural studies. Furthermore, we have determined the first crystal structure of the N-terminal EF-hand motifs (DGKα-EF) in its Ca2+ bound form. Our biochemical and biophysical analyses also reveal that DGKα-EF adopts a protease-susceptible “open” confirmation and cooperative binding of two Ca2+ ions induce substantial conformational changes, likely regulates intramolecular interactions responsible for the activation of DGKα.

Academic Significance and Societal Importance of the Research Achievements

脂質キナーゼであるDGKに関する構造生物学的理解は乏しく,活性が確認されて以来約60年,DGK触媒領域の構造は不明のままである.特に,がん免疫治療の標的の一つとして近年注視されているDGKαの構造基盤の解明は,構造に指南された阻害剤開発のためにひも必要である.本研究で初めて確率した昆虫細胞によるDGKα試料の大量発現・精製法およびN末端EFハンドドメインの構造決定と構造変化の解析は,これまで遅れていたDGKの構造研究を進展させるものである.

Report

(3 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • Research Products

    (19 results)

All 2019 2018 2017 Other

All Journal Article (8 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 8 results,  Open Access: 6 results) Presentation (8 results) (of which Int'l Joint Research: 1 results) Remarks (3 results)

  • [Journal Article] Crystal structure and calcium-induced conformational changes of diacylglycerol kinase α EF-hand domains2019

    • Author(s)
      Takahashi Daisuke、Suzuki Kano、Sakamoto Taiichi、Iwamoto Takeo、Murata Takeshi、Sakane Fumio
    • Journal Title

      Protein Science

      Volume: 28 Issue: 4 Pages: 694-706

    • DOI

      10.1002/pro.3572

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Myristic acid specifically stabilizes diacylglycerol kinase delta protein in C2C12 skeletal muscle cells.2019

    • Author(s)
      Iwata, K., Sakai, H., Takahashi, D. and Sakane F.
    • Journal Title

      Biochim Biophys Acta - Mol Cell Biol Lipids

      Volume: In press Issue: 7 Pages: 1031-1038

    • DOI

      10.1016/j.bbalip.2019.04.003

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Expression, purification and characterization of human diacylglycerol kinase zeta2019

    • Author(s)
      Saito, T., Takahashi, D. and Sakane, F.
    • Journal Title

      ACS Omega

      Volume: 4 Issue: 3 Pages: 5540-5546

    • DOI

      10.1021/acsomega.9b00079

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Diacylglycerol kinase α‐selective inhibitors induce apoptosis and reduce viability of melanoma and several other cancer cell lines2018

    • Author(s)
      Yamaki Atsumi、Akiyama Rino、Murakami Chiaki、Takao Saki、Murakami Yuki、Mizuno Satoru、Takahashi Daisuke、Kado Sayaka、Taketomi Akinobu、Shirai Yasuhito、Goto Kaoru、Sakane Fumio
    • Journal Title

      Journal of Cellular Biochemistry

      Volume: 120 Issue: 6 Pages: 10043-10056

    • DOI

      10.1002/jcb.28288

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Diacylglycerol kinase β induces filopodium formation via its C1, catalytic and carboxy-terminal domains and interacts with the Rac1-GTPase-activating protein, β2-chimaerin2018

    • Author(s)
      Maeda Yuki、Shibata Kosuke、Akiyama Rino、Murakami Yuki、Takao Saki、Murakami Chiaki、Takahashi Daisuke、Sakai Hiromichi、Sakane Fumio
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 504 Issue: 1 Pages: 54-60

    • DOI

      10.1016/j.bbrc.2018.08.119

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Expression and purification of human diacylglycerol kinase α from baculovirus-infected insect cells for structural studies2018

    • Author(s)
      Takahashi Daisuke、Sakane Fumio
    • Journal Title

      PeerJ

      Volume: 6 Pages: e5449-e5449

    • DOI

      10.7717/peerj.5449

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Abnormalities of the serotonergic system in diacylglycerol kinase δ-deficient mouse brain.2018

    • Author(s)
      Lu, Q., Komenoi, S., Usuki, T., Takahashi, D., and Sakane, F.
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 497 Issue: 4 Pages: 1031-1037

    • DOI

      10.1016/j.bbrc.2018.02.165

    • Related Report
      2018 Annual Research Report 2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Where do substrates of diacylglycerol kinases come from? Diacylglycerol kinases utilize diacylglycerol species supplied from phosphatidylinositol turnover-independent pathways.2018

    • Author(s)
      Sakane, F., Mizuno, S., Takahashi, D., Sakai, H.
    • Journal Title

      Adv. Biol. Regul.

      Volume: 67 Pages: 101-108

    • DOI

      10.1016/j.jbior.2017.09.003

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] DGKalpha活性制御の分子基盤:N末端RVH領域へのCa2+結合の物理化学的解析2019

    • Author(s)
      高橋大輔,嶋田睦,Jose Caaveiro, 阿部義人,植田正,坂根郁夫
    • Organizer
      日本生化学会九州支部例会
    • Related Report
      2018 Annual Research Report
  • [Presentation] α-シヌクレインの脂質結合能の解析とPAプロー ブへの応用2018

    • Author(s)
      山田遥夢, 高橋大輔, 坂根郁夫
    • Organizer
      第91回日本生化学会大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] バキュロウイルス昆虫細胞発現系を用いたジアシルグリセロールキナーゼζの発現精製と酵素学的解析2018

    • Author(s)
      西藤巧, 高橋大輔, 坂根郁夫
    • Organizer
      第91回日本生化学会大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Abnormalities of the serotonergic system in diacylglycerol kinase δ-deficient mouse brains.2018

    • Author(s)
      Lu, Q., Komenoi, S., Takahashi, D. and Sakane, F.
    • Organizer
      59th International Conference on the Bioscience of Lipids "Lipid Fluxes and Metabolism; From Fundamental Mechanisms to Human Disease":
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Molecular basis for the intramolecular regulation of DGKα: analysis of Ca2+ induced conformational changes in N-terminal EF-hand motifs2018

    • Author(s)
      Takahashi, D., Suzuki, K., Sakamoto, T., Iwamoto, T., Murata, T., and Sakane, F.
    • Organizer
      第18回日本蛋白質科学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] ジアシルグリセロールキナーゼδの欠損はセロトニン神経系の機能低下を惹起する2018

    • Author(s)
      陸強, 米野井優, 高橋大輔, 坂根郁夫
    • Organizer
      第60回日本脂質生化学会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Molecular basis for the intramolecular regulation of DGKα: analysis of Ca2+ induced conformational changes in N-terminal EF-hand motifs2018

    • Author(s)
      Daisuke Takahashi, Kano Suzuki, Taiichi Sakamoto, Takeo Iwamoto, Takeshi Murata, and Fumio Sakane
    • Organizer
      第18回 日本蛋白質科学会年会
    • Related Report
      2017 Research-status Report
  • [Presentation] 新規リン脂質プローブの開発を目指したジアシルグリセロールキナーゼηプレクストリン相同ドメインの脂質結合解析2017

    • Author(s)
      川瀬功暉,高橋大輔,坂本泰一,坂根郁夫
    • Organizer
      日本分子生物学会/日本生化学会 2017年度生命科学系学会合同年次大会
    • Related Report
      2017 Research-status Report
  • [Remarks] 千葉大学大学院 理学研究院 化学研究部門 生体機能化学研究室HP

    • URL

      https://sakane32.wixsite.com/biofunctionchemistry

    • Related Report
      2018 Annual Research Report
  • [Remarks] 九州大学大学院 薬学研究院 蛋白質創薬学分野HP

    • URL

      http://meneki.phar.kyushu-u.ac.jp/Protein/TOP.html

    • Related Report
      2018 Annual Research Report
  • [Remarks] 千葉大学大学院 理学研究院 化学研究部門 生体機能化学研究室ホームページ

    • URL

      http://sakane32.wixsite.com/biofunctionchemistry

    • Related Report
      2017 Research-status Report

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Published: 2017-04-28   Modified: 2020-03-30  

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