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The analysis of whole genome sequences in invasive nontypeable Haemophilus influenzae strains

Research Project

Project/Area Number 17K15769
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Laboratory medicine
Research InstitutionChiba University

Principal Investigator

Mashimo Yoichi  千葉大学, 大学院医学研究院, 技術専門職員 (90422253)

Project Period (FY) 2017-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2018: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2017: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywordsインフルエンザ菌 / 侵襲性感染症 / 無莢膜株 / 全ゲノムシーケンス / 次世代シーケンサー / 感染症 / ゲノム / 細菌
Outline of Final Research Achievements

In this study, we determined the whole genome sequences of nontypeable Haemophilus influenzae (NTHi) strains to identify invasive factor(s) in invasive NTHi infections. Highly accurate whole genome sequences of NTHi strains were obtained using long-read next-generation sequencing platforms (PacBio) and mutations in each strain were detected by comparison with reference sequences published in NCBI as complete genomes. In future studies, we plan to collect more whole genome sequences of H. influenzae strains to identify important factors related to, such as invasiveness, pathogenicity, toxicity and antimicrobial susceptibility.

Academic Significance and Societal Importance of the Research Achievements

Hibワクチンの普及以降、NTHi株による侵襲性感染症の報告が増加しており、病原菌の侵襲性に関与する因子には未解明の部分が多く存在している。また、薬剤耐性菌の増加も問題であり、その対策が重要となっている。対策としてまず、原因となる起炎菌について正確に知るということが挙げられ、正確な全ゲノム配列を決定することが診断法、治療薬、ワクチンの開発などに有用となると期待される。

Report

(4 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report

URL: 

Published: 2017-04-28   Modified: 2021-02-19  

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