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Elucidation of the mechanism of D-amino acid residue formation in crystallin involved in the pathogenesis of cataract

Research Project

Project/Area Number 17K16981
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Ophthalmology
Research InstitutionTohoku Medical and Pharmaceutical University

Principal Investigator

Manabe Noriyoshi  東北医科薬科大学, 薬学部, 講師 (10392383)

Project Period (FY) 2017-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2019: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2018: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2017: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywords白内障病態形成 / 計算化学 / NMR / 白内障の病態形成 / アスパラギン酸残基異性化 / アミノ酸残基の非酵素反応 / 紫外線の影響 / 乳酸触媒 / リン酸触媒 / 計算化学と生化学実験 / 眼科学 / 眼病理学 / 白内障
Outline of Final Research Achievements

The non-enzymatic reactions of aspartic acid and asparagine residues in crystallin, which are involved in the pathogenesis of cataracts, require a catalyst. Based on the hypothesis that lactate, phosphate, and oxidized residues act as catalysts for this reaction, we conducted a study using computational chemistry, physicochemical experiments, and biochemical experiments.
In the computational chemistry study, the lactate-catalyzed activation barrier was near the value at which the reaction proceeds under physiological conditions. This was supported by biochemical experiments. Furthermore, the effect of buffer solution was also confirmed. The effect of UV light was clarified by analyzing the changes in the NMR spectra of the UV-irradiated samples and the structural changes of amino acids.

Academic Significance and Societal Importance of the Research Achievements

白内障の原因は様々考えられるが、その1つとしてクリスタリン中のアスパラギン酸(Asp)残基の異性化が挙げられる。Asp残基が異性化する経路は非酵素反応だが、反応には触媒が必要となる。本研究では、乳酸やリン酸緩衝液を異性化経路の触媒とし、反応が生理的条件で起こるかを計算化学的に明らかとし、その結果を生化学実験により補完確認すること。また、紫外線の影響をNMR法を用いてAsp残基の異性化から明らかとする方法を確立すること。以上から、世界の失明原因第1位である白内障の病態形成に関わる因子解明とその新規検出方法の検討を行った。

Report

(5 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • 2018 Research-status Report
  • 2017 Research-status Report
  • Research Products

    (15 results)

All 2021 2020 2019 2018 2017

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Open Access: 3 results) Presentation (12 results) (of which Int'l Joint Research: 3 results)

  • [Journal Article] Phosphate-Catalyzed Succinimide Formation from an NGR-Containing Cyclic Peptide: A Novel Mechanism for Deammoniation of the Tetrahedral Intermediate2018

    • Author(s)
      Ryota Kirikoshi, Noriyoshi Manabe, Ohgi Takahashi
    • Journal Title

      Molecules

      Volume: 23 Issue: 9 Pages: 2217-2217

    • DOI

      10.3390/molecules23092217

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Phosphate-Catalyzed Succinimide Formation from Asp Residues: A Computational Study of the Mechanism2018

    • Author(s)
      Ryota Kirikoshi, Noriyoshi Manabe and Ohgi Takahashi
    • Journal Title

      International Journal of Molecular Sciences

      Volume: 19 Issue: 2 Pages: 637-637

    • DOI

      10.3390/ijms19020637

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Racemization of Serine Residues Catalyzed by Dihydrogen Phosphate Ion: A Computational Study2017

    • Author(s)
      Ohgi Takahashi, Ryota Kirikoshi and Noriyoshi Manabe
    • Journal Title

      Catalysts

      Volume: 7 Issue: 12 Pages: 363-363

    • DOI

      10.3390/catal7120363

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] NMR法によるペプチド中のAsp残基異性化のin situ判別2021

    • Author(s)
      真鍋 法義、大野 詩歩、山口 芳樹
    • Organizer
      日本薬学会第141年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 紫外線照射によるトリプトファン残基の化学構造変化2020

    • Author(s)
      真鍋法義,星憲司,大野詩歩,山口芳樹
    • Organizer
      日本薬学会第140年会
    • Related Report
      2019 Research-status Report
  • [Presentation] Asp-His配列からのスクシンイミド形成:His側鎖による分子内触媒機構2019

    • Author(s)
      高橋央宜,大野詩歩,真鍋法義
    • Organizer
      日本薬学会第139年会
    • Related Report
      2018 Research-status Report
  • [Presentation] リン酸二水素イオンを触媒とするAsp-Ser配列からのスクシンイミド生成2019

    • Author(s)
      大野詩歩,真鍋法義,高橋央宜
    • Organizer
      日本薬学会第139年会
    • Related Report
      2018 Research-status Report
  • [Presentation] 白内障の病態形成に関与するクリスタリン中Asp残基異性化の乳酸による触媒機構~計算化学的・生化学的検討~2019

    • Author(s)
      真鍋法義,佐々木雅人,田中大,大野賢一,大野詩歩,桐越亮太,加藤創,藤村務,柴田信之,高橋央宜
    • Organizer
      日本薬学会第139年会
    • Related Report
      2018 Research-status Report
  • [Presentation] 白内障病態形成に関わるクリスタリン中Asp残基異性化の乳酸による触媒機構~計算化学的・生化学的検討~2018

    • Author(s)
      真鍋法義,佐々木雅人,田中大,加藤創,藤村務,柴田信之,高橋央宜
    • Organizer
      第57回白内障学会総会・第44回水晶体研究会
    • Related Report
      2018 Research-status Report
  • [Presentation] アスパラギン酸残基からのスクシンイミド生成:リン酸水素イオン-カルシウムイオン接触イオン対による触媒作用の可能性2018

    • Author(s)
      高橋央宜,桐越亮太,大野詩歩,真鍋法義
    • Organizer
      第14回 D-アミノ酸学会学術講演会
    • Related Report
      2018 Research-status Report
  • [Presentation] Asp-Aspモチーフにおける非酵素反応:水4分子を含むモデル計算2018

    • Author(s)
      真鍋法義,岩渕明音,山本琴音,桐越亮太,高橋央宜
    • Organizer
      日本薬学会第138年会
    • Related Report
      2017 Research-status Report
  • [Presentation] スクシンイミド残基のラセミ化:リン酸二水素イオンによる触媒機構の計算化学的研究2018

    • Author(s)
      高橋央宜,安達夢,工藤雅仁,進藤和記子,桐越亮太,真鍋法義
    • Organizer
      日本薬学会第138年会
    • Related Report
      2017 Research-status Report
  • [Presentation] Lactic acid-catalyzed non-enzymatic deamidation of asparagine residues to four aspartic acid isomers: a computational study2017

    • Author(s)
      Noriyoshi Manabe, Ryota Kirikoshi, Ohgi Takahashi
    • Organizer
      The International Conference of D-Amino Acid Research(IDAR2017)
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] Phosphate-catalyzed succinimide formation from Asp residues: a computational study of the mechanism2017

    • Author(s)
      Ryota Kirikoshi, Noriyoshi Manabe, Ohgi Takahashi
    • Organizer
      The International Conference of D-Amino Acid Research(IDAR2017)
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] Racemization of serine residues catalyzed by dihydrogen phosphate ion: a computational study2017

    • Author(s)
      Ohgi Takahashi, Ryota Kirikoshi, Noriyoshi Manabe
    • Organizer
      The International Conference of D-Amino Acid Research(IDAR2017)
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research

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Published: 2017-04-28   Modified: 2022-01-27  

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