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Investigation of novel genes responsible for intellectual disability and multiple congenital anomalies of unknown etiology

Research Project

Project/Area Number 17K17693
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Human genetics
Medical genome science
Research InstitutionTokyo Medical and Dental University

Principal Investigator

UEHARA Daniela Tiaki  東京医科歯科大学, 難治疾患研究所, 特任助教 (90779513)

Project Period (FY) 2017-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2018: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2017: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
KeywordsIntellectual disability / Congenital anomalies / Sequencing / Candidate gene / ゲノム / 遺伝学 / 遺伝子 / 医療・福祉
Outline of Final Research Achievements

Intellectual disability (ID) and multiple congenital anomalies (MCA) are complex neurodevelopmental disorders affecting 2-3% of the general population. Due to the high genetic heterogeneity, the diagnosis is challenging and remains largely unknown. This project aimed at detecting causative single nucleotide variants in undiagnosed ID/MCA patients previously negative for pathogenic copy number variants, with a focus on identifying novel candidate genes.
Whole-exome sequencing was performed in six parent-child trios, in which causative genes were detected in three cases. In two of the cases, rare mutations in genes that have never been associated to disorders were identified, making them potential novel candidate genes. We joined an international collaboration that had been investigating mutations in one of the novel genes, and this work was able to define a new ID/MCA disorder. Currently, functional assays are being carried out for the second novel candidate gene.

Academic Significance and Societal Importance of the Research Achievements

This research was able to successfully identify the causative gene in 50% of the cases, and more importantly, two novel candidate genes. Besides providing a definitive molecular diagnosis, such results might help to guide treatment and better care of each patient.

Report

(3 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • Research Products

    (6 results)

All 2018 2017 Other

All Int'l Joint Research (1 results) Journal Article (1 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (4 results) (of which Int'l Joint Research: 2 results)

  • [Int'l Joint Research] NHGRI/National Institutes of Health(米国)

    • Related Report
      2018 Annual Research Report
  • [Journal Article] Comprehensive investigation of CASK mutations and other genetic etiologies in 41 patients with intellectual disability and microcephaly with pontine and cerebellar hypoplasia (MICPCH)2017

    • Author(s)
      Hayashi S, Uehara DT, Tanimoto K, Mizuno S, Chinen Y, Furukawa S, Takanashi J, Osaka H, Okamoto N, Inazawa J.
    • Journal Title

      PLoS One

      Volume: 12 Issue: 8 Pages: e0181791-e0181791

    • DOI

      10.1371/journal.pone.0181791

    • NAID

      120006825904

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] Targeted next-generation resequencing analysis in 105 subjects with undiagnosed intellectual disability and multiple congenital anomalies.2018

    • Author(s)
      Uehara DT, Tanimoto K, Inazawa J
    • Organizer
      The 68th Annual Meeting of The American Society of Human Genetics
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Targeted resequencing in 105 subjects with undiagnosed intellectual disability and multiple congenital anomalies.2018

    • Author(s)
      Uehara DT, Tanimoto K, Inazawa J
    • Organizer
      The 63rd Annual Meeting of The Japanese Society of Human Genetics
    • Related Report
      2018 Annual Research Report
  • [Presentation] Targeted next-generation sequencing of 75 genes in Japanese patients with intellectual disability and multiple congenital anomalies of unknown etiology2017

    • Author(s)
      Uehara DT, Tanimoto K, Inazawa J
    • Organizer
      The 67th Annual Meeting of The American Society of Human Genetics
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] Targeted resequencing of 75 genes in subjects with undiagnosed intellectual disability and multiple congenital anomalies2017

    • Author(s)
      Uehara DT, Tanimoto K, Inazawa J
    • Organizer
      The 62nd Annual Meeting of The Japan Society of Human Genetics
    • Related Report
      2017 Research-status Report

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Published: 2017-04-28   Modified: 2020-03-30  

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