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tRNA engineering for new peptide natural products in Streptomycetes

Research Project

Project/Area Number 17K19243
Research Category

Grant-in-Aid for Challenging Research (Exploratory)

Allocation TypeMulti-year Fund
Research Field Agricultural chemistry and related fields
Research InstitutionFukui Prefectural University

Principal Investigator

HAMANO Yoshimitsu  福井県立大学, 生物資源学部, 教授 (50372834)

Research Collaborator MARUYAMA Chitose  
NIIKURA Haruka  
MATSUDA Kanki  
Project Period (FY) 2017-06-30 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Fiscal Year 2018: ¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2017: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
KeywordstRNA / ペプチド合成酵素 / ペプチド / 生合成
Outline of Final Research Achievements

Transfer RNA (tRNA)-dependent amide bond forming enzymes are reported to be involved in the biosynthesis of peptide natural products from Streptomycetes by hijacking aminoacyl-tRNAs from protein biosynthesis. Recently, we also identified two tRNA-dependent enzymes, Orf11 and Sba18, which are involved in the biosynthesis of glycylthricin; they catalyze a condensation reaction between the biosynthetic intermediates, Gly-tRNA and aminosugar, via amide bond. Although Orf11 can accept only the Gly-tRNA as a substrate for the amide bond formation, Sba18 shows a promiscuous substrate specificity against aminoacyl-tRNAs, producing not only glycylthricin but also two novel grycylthricin-related compounds. Therefore, a better understanding of the substrate specificity of Sba18 would generate novel unnatural natural compounds by chemoenzymatic synthesis. Indeed, the unique substrate specificity of Sba18 gave us 14 new compounds related to glycylthricin.

Academic Significance and Societal Importance of the Research Achievements

抗がん剤、抗生物質、抗ウイルス剤など現代に無くてはならない医薬品については、より多くの新薬開発が世界的に求められている。その新たな戦略として、様々な理由から未利用のままである天然由来生理活性物質について、生合成研究から見出した生合成酵素を活用し、化学構造の多様性を創出することが可能になれば、新たな医薬品リード化合物の創製につながると考えられる。抗生物質streptothricin(ST)も未利用資源の一つであり、我々が見出した新規アミド合成酵素の活用は、STの臨床利用への可能性が期待できる。

Report

(3 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • Research Products

    (11 results)

All 2019 2018 2017

All Presentation (11 results) (of which Int'l Joint Research: 8 results,  Invited: 8 results)

  • [Presentation] Substrate specificity of tRNA-dependent amide bond-forming enzyme2019

    • Author(s)
      Yoshimitsu Hamano
    • Organizer
      2nd China-Japan Joint Symposium on Natural Product Biosynthesis
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Substrate specificity of tRNA-dependent amide bond-forming enzyme2018

    • Author(s)
      Yoshimitsu Hamano
    • Organizer
      9th International Congress on Biocatalysis
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Substrate specificity of tRNA-dependent amide bond-forming enzyme2018

    • Author(s)
      Yoshimitsu Hamano
    • Organizer
      1st Japan-German Symposium Biosynthesis and Function of Natural Products
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Biosynthesis of streptothricin group antibiotics2018

    • Author(s)
      Yoshimitsu Hamano
    • Organizer
      The 3rd A3 foresight symposium on Chemical & Synthetic Biology of Natural Products
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Promiscuous reactivity of aminoacyl-tRNA-dependent enzyme2018

    • Author(s)
      Chitose Maruyama, Kanki Matsuda, Haruka Niikura, Yasushi Ogasawara, Junko Hashimoto, Kazuo Shin-ya, Tohru Dairi, Yoshimitsu Hamano
    • Organizer
      The 3rd A3 foresight symposium on Chemical & Synthetic Biology of Natural Products
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Amide-bond forming enzymes in the biosynthesis of streptothricin group antibiotics2017

    • Author(s)
      Yoshimitsu Hamano
    • Organizer
      1st US-China Seminar on the Biosyntheis of Natural Products
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Amide-bond forming enzymes in the biosynthesis of streptothricin group antibiotics2017

    • Author(s)
      Yoshimitsu Hamano
    • Organizer
      Society of Industrial Microbiology and Biotechnology (SIMB) 2017 meetin
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Amide-bond Forming Enzymes in the Biosynthesis of Streptothricin Group Antibiotics2017

    • Author(s)
      Yoshimitsu Hamano
    • Organizer
      9th US-Japan Seminar on the Biosyntheis of Natural Products
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] streptothricin類縁抗生物質の生合成研究に見出したtRNA依存性ペプチド合成酵素2017

    • Author(s)
      濱野吉十
    • Organizer
      新学術領域研究(研究領域提案型)生物合成系の再設計による複雑骨格機能分子の革新的創成科学,第1回公開シンポジウム
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] Streptothricin類縁生合成遺伝子群に見出したaminoacyl-tRNA依存型ペプチド合成酵素における基質認識機構の解析2017

    • Author(s)
      松田貫暉,丸山千登勢,橋本絢子,新家一男,濱野吉十
    • Organizer
      日本農芸化学会中部支部第180回例会
    • Related Report
      2017 Research-status Report
  • [Presentation] Streptothricin類縁生合成遺伝子群に見出したaminoacyl-tRNA依存型ペプチド合成酵素における基質認識機構の解析2017

    • Author(s)
      丸山千登勢,松田貫暉,橋本絢子,新家一男,濱野吉十
    • Organizer
      2017年度日本放線菌学会大会
    • Related Report
      2017 Research-status Report

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Published: 2017-07-21   Modified: 2024-01-30  

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