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Direct observation of strain-dependent dynamic behaviors of biomolecules by high-speed AFM

Research Project

Project/Area Number 17K19345
Research Category

Grant-in-Aid for Challenging Research (Exploratory)

Allocation TypeMulti-year Fund
Research Field Molecular and Genome biology and related fields
Research InstitutionKanazawa University

Principal Investigator

Kodera Noriyuki  金沢大学, ナノ生命科学研究所, 教授 (30584635)

Project Period (FY) 2017-06-30 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Fiscal Year 2019: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2018: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2017: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywords一分子イメージング / 高速AFM / 生体分子 / アクチン線維 / 細胞骨格 / 原子間力顕微鏡 / ナノ計測 / アクチンフィラメント / 生物物理学 / タンパク質 / モータータンパク質 / DNA結合タンパク質 / 生物物理 / 一分子計測(SMD) / 走査プローブ顕微鏡
Outline of Final Research Achievements

It is recently recognized that the functions of biomolecules (proteins and nucleic acids) are modulated by external forces (tension and compressive forces). Direct observation of proteins at work under an external load by high-speed AFM would greatly gain the mechanistic insight of their functional modulation under the load. To realize this observation, the present study have addressed the development of a high-speed AFM scanner with manipulator, in which a manipulation-scanner was additionally installed just adjacent to the imaging-scanner. The base of a manipulator needle was glued on the manipulation-scanner, while the other sharp end was gently placed on the surface of the imaging-scanner. Using the developed system, we succeeded in applying external force to biomolecules during high-AFM observation.

Academic Significance and Societal Importance of the Research Achievements

これまで生体分子の機能の張力応答は光ピンセット法などで調べることができたが、生体分子の形状がどのようになっているかは想像するしかなかった。一方、本研究の実施により、生体分子の形状と動きを高速AFM で同時観察しつつ、それらの張力負荷応答を直接的に見ることができる装置の開発が進められた。未だ誰も見たことがない生命現象の一端を理解するための重要な知見を提供する装置となることが期待される。また、生体分子の張力依存による機能変調を深く理解できれば、医薬品やバイオナノテクノロジーの開発指針となる新しい概念を提供できる可能性がある。

Report

(4 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report
  • Research Products

    (87 results)

All 2020 2019 2018 2017 Other

All Int'l Joint Research (5 results) Journal Article (21 results) (of which Int'l Joint Research: 7 results,  Peer Reviewed: 20 results,  Open Access: 14 results) Presentation (49 results) (of which Int'l Joint Research: 8 results,  Invited: 21 results) Book (2 results) Remarks (7 results) Patent(Industrial Property Rights) (3 results)

  • [Int'l Joint Research] IISER Thiruvananthapuram(インド)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] KU Leuven(ベルギー)

    • Related Report
      2018 Research-status Report
  • [Int'l Joint Research] University of Paris Diderot(フランス)

    • Related Report
      2018 Research-status Report
  • [Int'l Joint Research] University of Michigan/UAB Medical Center(米国)

    • Related Report
      2018 Research-status Report
  • [Int'l Joint Research] LMU Munich(ドイツ)

    • Related Report
      2018 Research-status Report
  • [Journal Article] Molecular and functional analysis of pore-forming toxin Monalysin from entomopathogenic bacterium Pseudomonas entomophila2020

    • Author(s)
      2.Nonaka S†, Salim E†, Kamiya K*, Hori A, Nainu F, Asri RM, Masyita A, Nishiuchii T, Takeuchi S, Kodera N*, Kuraishi T*
    • Journal Title

      Front. Immunol.

      Volume: 11 Pages: 520-520

    • DOI

      10.3389/fimmu.2020.00520

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Dynamics of oligomer and amyloid fibril formation by yeast prion Sup35 observed by high-speed atomic force microscopy2020

    • Author(s)
      Konno H, Watanabe-Nakayama T, Uchihashi T, Okuda M, Zhu L, Kodera N, Kikuchi Y, Ando T, Taguchi H
    • Journal Title

      Proc. Natl. Acad. Sci. U S A

      Volume: 117 Issue: 14 Pages: 7831-7836

    • DOI

      10.1073/pnas.1916452117

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Diversity of physical properties of bacterial extracellular membrane vesicles revealed through atomic force microscopy phase imaging2020

    • Author(s)
      Kikuchi Yousuke、Obana Nozomu、Toyofuku Masanori、Kodera Noriyuki、Soma Takamitsu、Ando Toshio、Fukumori Yoshihiro、Nomura Nobuhiko、Taoka Azuma
    • Journal Title

      Nanoscale

      Volume: 12 Issue: 14 Pages: 7950-7959

    • DOI

      10.1039/c9nr10850e

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Structural insights into the substrate specificity switch mechanism of the type III protein export apparatus2019

    • Author(s)
      Y., Y. Ogawa, M. Kinoshita, N. Terahara, M. Shimada, N. Kodera, T. Ando, K. Namba, A. Kitao, K. Imada, T. Minamino
    • Journal Title

      Structure

      Volume: 印刷中 Issue: 6 Pages: 965-976

    • DOI

      10.1016/j.str.2019.03.017

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Development of high-speed ion conductance microscopy2019

    • Author(s)
      S. Watanabe, S. Kitazawa, L. Sun, N. Kodera, T. Ando
    • Journal Title

      Rev. Sci. Instrum.

      Volume: 90 Issue: 12 Pages: 123704-123704

    • DOI

      10.1063/1.5118360

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Direct Visualization of Avian Influenza H5N1 Hemagglutinin Precursor and its Conformational Change by High-Speed Atomic Force Microscopy2019

    • Author(s)
      Lim SK, Mohamed MS, Wang H, Hartono, Hazawa M, Kobayashi A, Voon DC, Kodera N, Ando T and Wong RW
    • Journal Title

      BBA - General Subjects

      Volume: 印刷中 Issue: 2 Pages: 129313-129313

    • DOI

      10.1016/j.bbagen.2019.02.015

    • Related Report
      2019 Annual Research Report 2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Visualizing dynamic actin cross‐linking processes driven by the actin‐binding protein anillin2019

    • Author(s)
      Matsuda Kyohei、Sugawa Mitsuhiro、Yamagishi Masahiko、Kodera Noriyuki、Yajima Junichiro
    • Journal Title

      FEBS Letters

      Volume: 594 Issue: 8 Pages: 1237-1247

    • DOI

      10.1002/1873-3468.13720

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 高速AFMが捕らえた!Mycoplasma mobileの滑走装置2019

    • Author(s)
      小林昂平、古寺哲幸、田原悠平、 豊永拓真、笠井大司、安藤敏夫、宮田真人
    • Journal Title

      顕微鏡

      Volume: 54 Pages: 67-71

    • NAID

      130007704157

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Structure of the UHRF1 Tandem Tudor Domain Bound to a Methylated Non-histone Protein, LIG1, Reveals Rules for Binding and Regulation2019

    • Author(s)
      Kori, S. Ferry, L. Matano, S. Jimenji, T. Kodera, N. Tsusaka, T. Matsumura, R. Oda, T. Sato, M. Dohmae, N. Ando, T. Shinkai, Y. Defossez, P. A. Arita, K.
    • Journal Title

      Structure

      Volume: 27 Issue: 3 Pages: 1-12

    • DOI

      10.1016/j.str.2018.11.012

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Single-Unit Imaging of Membrane Protein-Embedded Nanodiscs from Two Oriented Sides by High-Speed Atomic Force Microscopy2019

    • Author(s)
      Haruyama, T. Sugano, Y. Kodera, N. Uchihashi, T. Ando, T. Tanaka, Y. Konno, H. Tsukazaki, T.
    • Journal Title

      Structure

      Volume: 27 Issue: 1 Pages: 152-160

    • DOI

      10.1016/j.str.2018.09.005

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Optimum Substrates for Imaging Biological Molecules with High-Speed Atomic Force Microscopy2018

    • Author(s)
      Uchihashi, T. Watanabe, H. Kodera, N.
    • Journal Title

      Methods in molecular biology

      Volume: 1814 Pages: 159-179

    • DOI

      10.1007/978-1-4939-8591-3_10

    • ISBN
      9781493985906, 9781493985913
    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] Insight into structural remodeling of the FlhA ring responsible for bacterial flagellar type III protein export2018

    • Author(s)
      N. Terahara, Y. Inoue, N. Kodera, Y. V. Morimoto, T. Uchihashi, K. Imada, T. Ando, K. Namba, and T. Minamino
    • Journal Title

      Sci. Adv.

      Volume: 4 Issue: 4

    • DOI

      10.1126/sciadv.aao7054

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Real time monitoring of lipid exchange via fusion of peptide based lipid-nanodisc2018

    • Author(s)
      T. Ravula, D. Ishikuro, N. Kodera, T. Ando, G. Anantharamaiah, A. Ramamoorthy
    • Journal Title

      Chemistry of Materials

      Volume: 印刷中 Issue: 10 Pages: 3204-3207

    • DOI

      10.1021/acs.chemmater.8b00946

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Direct Imaging of Walking Myosin V by High-Speed Atomic Force Microscopy2018

    • Author(s)
      Kodera, N. Ando, T.
    • Journal Title

      Methods in molecular biology

      Volume: 1805 Pages: 103-122

    • DOI

      10.1007/978-1-4939-8556-2_6

    • ISBN
      9781493985548, 9781493985562
    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Unconventional Imaging Methods to Capture Transient Structures during Actomyosin Interaction2018

    • Author(s)
      Katayama, E. Kodera, N.
    • Journal Title

      International journal of molecular sciences

      Volume: 19 Issue: 5 Pages: 1402-1402

    • DOI

      10.3390/ijms19051402

    • Related Report
      2018 Research-status Report
  • [Journal Article] Free Energy Landscape and Dynamics of Supercoiled DNA by High-Speed Atomic Force Microscopy2018

    • Author(s)
      Brouns, T. De Keersmaecker, H. Konrad, S. F. Kodera, N. Ando, T. Lipfert, J. De Feyter, S. Vanderlinden, W.
    • Journal Title

      ACS Nano

      Volume: 12 Issue: 12 Pages: 11907-11916

    • DOI

      10.1021/acsnano.8b06994

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Negatively Charged Lipids Are Essential for Functional and Structural Switch of Human 2-Cys Peroxiredoxin II2018

    • Author(s)
      Haruyama Takamitsu、Uchihashi Takayuki、Yamada Yutaro、Kodera Noriyuki、Ando Toshio、Konno Hiroki
    • Journal Title

      Journal of Molecular Biology

      Volume: 430 Issue: 5 Pages: 602-610

    • DOI

      10.1016/j.jmb.2017.12.020

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] High-Resolution Imaging of a Single Gliding Protofilament of Tubulins by HS-AFM2017

    • Author(s)
      Keya Jakia Jannat、Inoue Daisuke、Suzuki Yuki、Kozai Toshiya、Ishikuro Daiki、Kodera Noriyuki、Uchihashi Takayuki、Kabir Arif Md. Rashedul、Endo Masayuki、Sada Kazuki、Kakugo Akira
    • Journal Title

      Scientific Reports

      Volume: 7 Issue: 1 Pages: 6166-6166

    • DOI

      10.1038/s41598-017-06249-1

    • NAID

      120006368158

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] High-Speed Atomic Force Microscopy Reveals Loss of Nuclear Pore Resilience as a Dying Code in Colorectal Cancer Cells.2017

    • Author(s)
      Mohamed MS, Kobayashi A, Taoka A, Watanabe-Nakayama T, Kikuchi Y, Hazawa M, Minamoto T, Fukumori Y, Kodera N, Uchihashi T, Ando T, Wong RW
    • Journal Title

      ACS Nano.

      Volume: 11(6) Issue: 6 Pages: 5567-5578

    • DOI

      10.1021/acsnano.7b00906

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Real-space and real-time dynamics of CRISPR-Cas9 visualized by high-speed atomic force microscopy2017

    • Author(s)
      Shibata Mikihiro、Nishimasu Hiroshi、Kodera Noriyuki、Hirano Seiichi、Ando Toshio、Uchihashi Takayuki、Nureki Osamu
    • Journal Title

      Nature Communications

      Volume: 8 Issue: 1 Pages: 1430-1430

    • DOI

      10.1038/s41467-017-01466-8

    • NAID

      120006374160

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Na+-induced structural transition of MotPS for stator assembly of the Bacillus flagellar motor2017

    • Author(s)
      Terahara Naoya、Kodera Noriyuki、Uchihashi Takayuki、Ando Toshio、Namba Keiichi、Minamino Tohru
    • Journal Title

      Science Advances

      Volume: 3 Issue: 11 Pages: 4119-4119

    • DOI

      10.1126/sciadv.aao4119

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Recent developments in high-speed AFM2019

    • Author(s)
      Noriyuki Kodera
    • Organizer
      Joint UBI-NanoLSI workshop-Trends in molecular biophysics of living cells-
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 細胞表面動態の高精度計測を目指した高速原子間力顕微鏡装置の開発2019

    • Author(s)
      清水将裕, 岡本千優, 今井大達, 渡辺信嗣, 安藤敏夫, 古寺哲幸
    • Organizer
      第57回日本生物物理学会年会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Video imaging of bio-molecule in action by high-speed atomic force microscopy2019

    • Author(s)
      Noriyuki Kodera
    • Organizer
      3rd NanoLSI Symposium
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 高速AFMによる生体分子のビデオイメージング2019

    • Author(s)
      古寺哲幸
    • Organizer
      第15回小動物インビボイメージング研究会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] ゲノム安定性維持における天然変性タンパク質 CAMP の動的制御2019

    • Author(s)
      池田真教 、成田知恕、清水将裕、古寺哲幸、田中耕三
    • Organizer
      第19回日本蛋白質科学会年会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 高速AFM(原子間力顕微鏡)による生体分子のナノ動態のビデオ観察2019

    • Author(s)
      古寺哲幸
    • Organizer
      2019年度科学基礎論学会講演会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 高速AFMによる活きた生体分子のビデオ観察2019

    • Author(s)
      古寺哲幸
    • Organizer
      第43回日本頭頸部癌学会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 高速AFM用凹凸基板の改良とその応用実験2019

    • Author(s)
      上田 健太、石黒 大輝、角野 歩、柴田 幹大、古寺 哲幸
    • Organizer
      平成30年度日本生物物理学会中部支部講演会
    • Related Report
      2018 Research-status Report
  • [Presentation] マニピュレーター機能付き高速AFMスキャナーの開発2019

    • Author(s)
      髙野 純、執行 航希、開発 秀星、田嶋 将、渡辺 信嗣、安藤 敏夫、古寺 哲幸
    • Organizer
      平成30年度日本生物物理学会中部支部講演会
    • Related Report
      2018 Research-status Report
  • [Presentation] High-speed AFM imaging of bio-molecules in dynamic action2018

    • Author(s)
      Noriyuki Kodera
    • Organizer
      International IPR Seminar
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Interpretation of HS-AFM images using coarse-grained molecular dynamics simulation2018

    • Author(s)
      Noriyuki Kodera
    • Organizer
      Workshop “Trends in Computational Molecular Biophysics”
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 高速AFMを用いた生体分子の動態観察2018

    • Author(s)
      古寺哲幸
    • Organizer
      第 169 委員会 第 56 回研究会
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] 高速AFMの開発とそのバイオ応用に魅せられて2018

    • Author(s)
      古寺哲幸
    • Organizer
      生化学若い研究者の会 北陸支部 夏の研究セミナー
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] Single-molecule visualization of intrinsically disordered Rett syndrome protein, MeCP2 by high-speed AFM2018

    • Author(s)
      古寺 哲幸, Kalashnikova Anna, Porter-Goff Mary E, 安藤 敏夫, Hansen Jeffrey C.
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] 高速AFMと計算科学の融合の試み2018

    • Author(s)
      古寺哲幸
    • Organizer
      大阪大学蛋白質研究所セミナー
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] Video imaging of proteins at work by high-speed Atomic Force Microscopy2018

    • Author(s)
      Noriyuki Kodera, Toshio Ando
    • Organizer
      第41回日本分子生物学会年会
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] Movement of Gliding Motors in Mycoplasma mobile Visualized by High-speed AFM2018

    • Author(s)
      Kohei Kobayashi, Noriyuki Kodera, Yuhei O Tahara, Takuma Toyonaga, Taishi Kasai, Toshio Ando, Makoto Miyata
    • Organizer
      日本顕微鏡学会第61回シンポジウム
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] 高速AFMによるバクテリアの膜小胞の一粒子物性解析2018

    • Author(s)
      菊池 洋輔, 尾花 望, 豊福 雅典, 野村 暢彦, 古寺 哲幸, 安藤 敏夫, 福森 義宏, 田岡 東
    • Organizer
      日本顕微鏡学会第61回シンポジウム
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] Gliding Machinery of Mycoplasma mobile Visualized by High-speed Atomic Force Microscopy2018

    • Author(s)
      Kohei Kobayashi, Noriyuki Kodera, Yuhei O Tahara, Takuma Toyonaga, Taishi Kasai, Toshio Ando, Makoto Miyata
    • Organizer
      Joint Congress of 7th AOM, 45th JSM
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] High-speed AFM imaging revealed the physical diversity of membrane vesicles produced from Gram-negative and Gram-positive bacteria2018

    • Author(s)
      菊池 洋輔, 尾花 望, 豊福 雅典, 野村 暢彦, 古寺 哲幸, 安藤 敏夫, 福森 義宏, 田岡 東
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] Live Imaging of Single-Molecules under External Force using Tip-Scan High-Speed AFM Combined with Optical Tweezers2018

    • Author(s)
      今村 元紀, 梅田 健一, 山中 信之介, 古寺 哲幸, 安藤 敏夫
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] High-speed AFM imaging of protein assembly-disassembly on curved membranes2018

    • Author(s)
      石黒 大輝, 後藤 朱音, 豊田 貴大, 角野 歩, 柴田 幹大, 古寺 哲幸
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] Structural dynamics of the intrinsically disordered protein CAMP revealed by high-speed AFM2018

    • Author(s)
      成田 知恕, 池田 真教, 清水 将裕, 田中 耕三, 古寺 哲幸
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] Gliding machinery of Mycoplasma mobile visualized by high-speed AFM2018

    • Author(s)
      小林 昂平, 古寺 哲幸, 田原 悠平, 豊永 拓真, 笠井 大司, 安藤 敏夫, 宮田 真人
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] Development of a method for analyzing high-speed AFM observations by coarse-grained molecular dynamics simulation2018

    • Author(s)
      清水 将裕, 成田 知恕, 古寺 哲幸
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] Development of high-speed AFM scanner with manipulator2018

    • Author(s)
      高野 純, 渡辺 信嗣, 安藤 敏夫, 古寺 哲幸
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] Gliding Machinery of Mycoplasma mobile Visualized by High-speed Atomic Force Microscopy2018

    • Author(s)
      Kohei Kobayashi, Noriyuki Kodera, Yuhei O Tahara, Takuma Toyonaga, Taishi Kasai, Toshio Ando, Makoto Miyata
    • Organizer
      22nd Congress of the International Organization for Mycoplasmology
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] Observation of the dynamics associated with ubiquitination of HECT E3 ubiquitin ligase using High speed AFM2018

    • Author(s)
      室 郁弥, 小林 史典, 中山 隆宏, 古寺 哲幸, 安藤 敏夫, 紺野 宏記
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] Potent and highly cooperative inhibition of actin movement on HMM by actin binding domain of Rng22018

    • Author(s)
      早川 悠貴, ンゴー キエン, 古寺 哲幸, 上田 太郎
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] Molecular Structures of Actin Filaments Bound with α-Actinin, Tropomyosin-Troponin and Myosin II Analyzed by High Speed AFM2018

    • Author(s)
      ンゴー キエン, 古寺 哲幸, 上田 太郎
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] High-speed AFM imaging of membrane protein embedded in Nanodisc2018

    • Author(s)
      春山 隆充, 菅野 泰功, 古寺 哲幸, 内橋 貴之, 安藤 敏夫, 田中 良樹, 紺野 宏記, 塚崎 智也
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] Assignment of subunit components in motor evolved from F-ATPase for Mycoplasma mobile gliding2018

    • Author(s)
      豊永 拓真, 加藤 貴之, 川本 晃大, 古寺 哲幸, 安藤 敏夫, 難波 啓一, 宮田 真人
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] Structural study on Trigger Factor chaperone: Substrate recognition and foldase activity2017

    • Author(s)
      Tomohide Saio, Noriyuki Kodera, Charalampos G Kalodimos, Koichiro Ishimori
    • Organizer
      International Symposium on Protein Quality Control
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] HS-AFM Observations of Protein Dynamics on 3D-patterned Substrate2017

    • Author(s)
      Akane Goto, Mikihiro Shibata, Ayumi Sumino, Noriyuki Kodera
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Research-status Report
  • [Presentation] Physical heterogeneity of bacterial membrane vesicles revealed by high-speed AFM2017

    • Author(s)
      Yousuke Kikuchi, Tatunori Kiyokawa, Kana Morinaga, Yuuma Susa, Yasuda Marina, Hibiki Okuwaki, Ryukou Souma, Nozomu Obana, Masanori Toyohuku, Nobuhiko Nomura, Noriyuki Kodera, Toshio Ando, Yoshihiro Fukumori, Azuma Taoka
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Research-status Report
  • [Presentation] Two-dimensional crystals of tamavidin 2 for a quick and easy method of immobilization of biotinylated biomolecules2017

    • Author(s)
      Daisuke Noshiro, Noriyuki Kodera, Toshio Ando
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Research-status Report
  • [Presentation] Direct observation of proteins-lipid membrane interactions depending on the physical shape of lipid membrane by high-speed AFM2017

    • Author(s)
      Takahiro Toyoda, Akane Goto, Ayumi Sumino, Mikihiro Shibata, Noriyuki Kodera
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Research-status Report
  • [Presentation] Loss of Nuclear Pore Selective Barrier Revealed by High-Speed Atomic Force Microscopy in Colorectal Cancer Cells2017

    • Author(s)
      Mahmoud Shaaban Mohamed, Akiko Kobayashi, Azuma Taoka, Takahiro Watanabe-Nakayama, Yosuke Kikuchi, Masaharu Hazawa, Toshinari Minamoto, Yoshihiro Fukumori, Noriyuki Kodera, Takayuki Uchihashi, Toshio Ando, Richard Wong
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Research-status Report
  • [Presentation] Structural dynamics of the intrinsically disordered protein CAMP revealed by high-speed AFM2017

    • Author(s)
      Tomoyuki Narita, Masanori Ikeda, Kozo Tanaka, Noriyuki Kodera
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Research-status Report
  • [Presentation] High speed AFM imaging of structural changes in actin filaments bound tropomyosin-troponin in presence of myosin S1 and ATP2017

    • Author(s)
      Kien Xuan Ngo, Taro QP Uyeda, Noriyuki Kodera
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Research-status Report
  • [Presentation] Real time observation of Trigger Factor assisted protein folding using high-speed atomic force microscope2017

    • Author(s)
      Taiji Namba, Tomohide Saio, Koichiro Ishimori, Noriyuki Kodera
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Research-status Report
  • [Presentation] Real-time imaging of Na+-induced structural transitions of MotPS stator complex of flagellar motor by HS-AFM2017

    • Author(s)
      Naoya Terahara, Noriyuki Kodera, Takayuki Uchihashi, Toshio Ando, Keiichi Namba, Tohru Minamino
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Research-status Report
  • [Presentation] Structural dynamics analysis of intrinsically disordered proteins by high-speed AFM2017

    • Author(s)
      Noriyuki Kodera, Daisuke Noshiro, Sujit Dora, Toshio Ando
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] High-Speed AFM Observation of Domain Flexibility Related to Enzymatic Function of CRISPR-Cas92017

    • Author(s)
      Takayuki Uchihashi, Mikihiro Shibata, Hiroshi Nishimasu, Noriyuki Kodera, Seiichi Hirano, Toshio Ando, Osamu Nureki
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] 高速AFMによる生体分子の動態観察2017

    • Author(s)
      古寺哲幸、安藤敏夫
    • Organizer
      平成29年金沢大学十全医学会学術集会
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] 天然変性タンパク質CAMPを含む複合体の機能解析2017

    • Author(s)
      田中耕三、池田真教、藤田拡樹、古寺哲幸、安藤敏夫、家村顕自、永井正義
    • Organizer
      第17回日本蛋白質科学会年会
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] 高速AFMによる生体分子のビデオ観察2017

    • Author(s)
      古寺哲幸
    • Organizer
      第 31 回分子シミュレーション討論会
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] 高速 AFM による生体分子の形状と動きの同時観察2017

    • Author(s)
      古寺哲幸
    • Organizer
      第1271回ウイルス・再生医科学研究所セミナー
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] New insight into the functional switching of 2-Cys Preoxiredoxin revealed by high-speed atomic force microscopy2017

    • Author(s)
      Hiroki Konno, Takamitsu Haruyama, Takayuki Uchihashi, Yutaro Yamada, Noriyuki Kodera, Toshio Ando
    • Organizer
      Annual Biotechnology Congress
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Book] イメージング時代の構造生命科学2020

    • Author(s)
      田中 啓二、若槻 壮市
    • Total Pages
      248
    • Publisher
      羊土社
    • ISBN
      9784758103855
    • Related Report
      2019 Annual Research Report
  • [Book] The Role of Water in ATP Hydrolysis Energy Transduction by Protein Machinery2018

    • Author(s)
      Uyeda, Taro Q. P. Ngo, Kien Xuan Kodera, Noriyuki Tokuraku, Kiyotaka
    • Publisher
      Springer Singapore
    • ISBN
      9789811084591
    • Related Report
      2017 Research-status Report
  • [Remarks] 金沢大学生物物理学研究室

    • URL

      http://biophys.w3.kanazawa-u.ac.jp/index_J.htm

    • Related Report
      2019 Annual Research Report
  • [Remarks] ナノ生命科学研究所 古寺哲幸 研究紹介

    • URL

      https://nanolsi.kanazawa-u.ac.jp/research/researchers/noriyuki-kodera/

    • Related Report
      2019 Annual Research Report
  • [Remarks] ナノ生命科学研究所 古寺哲幸 Researcher’s Voice #3

    • URL

      https://www.kanazawa-u.ac.jp/research/re-voice/rv3

    • Related Report
      2019 Annual Research Report
  • [Remarks] 金沢大学 生物物理学研究室

    • URL

      http://biophys.w3.kanazawa-u.ac.jp/index.htm

    • Related Report
      2018 Research-status Report
  • [Remarks] 金沢大学 研究者情報

    • URL

      http://ridb.kanazawa-u.ac.jp/public/detail.php?id=3403

    • Related Report
      2018 Research-status Report
  • [Remarks] 金沢大学 WPIナノ生命科学研究所

    • URL

      https://nanolsi.kanazawa-u.ac.jp/

    • Related Report
      2018 Research-status Report
  • [Remarks] はかる 第3回

    • URL

      https://www.jst.go.jp/pr/jst-news/pdf/2017_08/2017_08_p12-13.pdf

    • Related Report
      2017 Research-status Report
  • [Patent(Industrial Property Rights)] 走査型プローブ顕微鏡およびZ駆動装置2019

    • Inventor(s)
      古寺哲幸, 清水将裕, 安藤敏夫
    • Industrial Property Rights Holder
      古寺哲幸, 清水将裕, 安藤敏夫
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2019-120245
    • Filing Date
      2019
    • Related Report
      2019 Annual Research Report
  • [Patent(Industrial Property Rights)] マニピュレータ機能付き原子間力顕微鏡2019

    • Inventor(s)
      古寺哲幸, 高野純, 他4名
    • Industrial Property Rights Holder
      古寺哲幸, 高野純, 他4名
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2019-149584
    • Filing Date
      2019
    • Related Report
      2019 Annual Research Report
  • [Patent(Industrial Property Rights)] 電気生理学的解析を可能にした原子間力顕微鏡2019

    • Inventor(s)
      古寺哲幸, 米川拓臣, 執行航希, 渡邉信嗣, 安藤敏夫
    • Industrial Property Rights Holder
      古寺哲幸, 米川拓臣, 執行航希, 渡邉信嗣, 安藤敏夫
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2019-153689
    • Filing Date
      2019
    • Related Report
      2019 Annual Research Report

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Published: 2017-07-21   Modified: 2021-02-19  

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