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Development of large-scale recording methods to allow single-cell-level computational analysis and neuronal classification according to target structures in freely behaving animals

Research Project

Project/Area Number 17K19462
Research Category

Grant-in-Aid for Challenging Research (Exploratory)

Allocation TypeMulti-year Fund
Research Field Neuroscience and related fields
Research InstitutionOsaka City University

Principal Investigator

Kenji Mizuseki  大阪市立大学, 大学院医学研究科, 教授 (80344448)

Research Collaborator Matsumoto Hideyuki  
Umaba Ryoko  
Aramaki Tomoko  
Project Period (FY) 2017-06-30 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥6,370,000 (Direct Cost: ¥4,900,000、Indirect Cost: ¥1,470,000)
Fiscal Year 2018: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2017: ¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Keywords単一神経細胞 / 大規模記録法 / 光遺伝学 / 入出力演算 / 投射先特異的 / 海馬 / 海馬台 / 自由行動下 / 大規模記録 / スパイク伝達 / シリコンプローブ / 情報処理 / シナプス結合 / 大規模同時記録法 / 投射先 / 相互相関解析 / 嗅内皮質 / 神経演算
Outline of Final Research Achievements

By combining large-scale electrophysiological recording and cross-correlogram analysis, we developed a novel method to measure the activity of many individual neurons, and to construct a connectivity map of the recorded neurons in freely behaving animals, thereby enabling the analysis of input-output transformation in single neurons. Further, by combining large-scale electrophysiological recording and optogenetics, we developed a novel method to classify recorded neurons based on their target structures in freely behaving animals. As we developed the technology with the goal of widespread applicability, our methods will enable neuroscience researchers to comprehensively understand single-cell-level computation and the mechanisms underlying pathway-specific information processing in freely behaving animals regardless of brain areas and animal species involved, thereby providing valuable assistance in elucidating the principles of neural circuit operation in various behaviors.

Academic Significance and Societal Importance of the Research Achievements

本研究は、大規模同時記録法と相互相関解析を融合させ、自由に行動する動物の脳において、単一細胞の入出力演算を網羅的に検出する技術を開発した。さらに、大規模同時記録により多数の神経細胞の発火活動を一斉に計測しながら光操作を援用して、記録している神経細胞の出力先の脳領域を同定する技術を開発した。これらの開発した技術は脳領域・動物種を問わず適用可能であるため、本研究の成果は脳研究の様々な局面に幅広く応用され、単一細胞レベルの入出力演算を包括的に理解し、投射先特異的な情報処理機構を明らかにするための基盤技術となることが期待される。

Report

(3 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • Research Products

    (26 results)

All 2019 2018 2017 Other

All Int'l Joint Research (2 results) Journal Article (5 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 4 results,  Open Access: 2 results) Presentation (11 results) (of which Int'l Joint Research: 6 results,  Invited: 5 results) Book (2 results) Remarks (6 results)

  • [Int'l Joint Research] University of Wisconsin-Milwaukee/University of Michigan/NIMH/NIH/DHHS(米国)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] Ruhr-University Bochum(ドイツ)

    • Related Report
      2018 Annual Research Report
  • [Journal Article] PET imaging of 11C-labeled coenzyme Q10: Comparison of biodistribution between [11C]ubiquinol-10 and [11C]ubiquinone-10.2019

    • Author(s)
      Watanabe K, Nozaki S, Goto M, Kaneko KI, Hayashinaka E, Irie S, Nishiyama A, Kasai K, Fujii K, Wada Y, Mizuno K, Mizuseki K, Doi H, Watanabe Y.
    • Journal Title

      Biochem Biophys Res Commun

      Volume: - Issue: 3 Pages: 611-615

    • DOI

      10.1016/j.bbrc.2019.03.073

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Hippocampal Reactivation Extends for Several Hours Following Novel Experience.2019

    • Author(s)
      Giri B, Miyawaki H, Mizuseki K, Cheng S, Diba K.
    • Journal Title

      J Neurosci

      Volume: 39 Issue: 5 Pages: 866-875

    • DOI

      10.1523/jneurosci.1950-18.2018

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] The subiculum: Unique hippocampal hub and more2018

    • Author(s)
      Matsumoto Nobuyoshi、Kitanishi Takuma、Mizuseki Kenji
    • Journal Title

      Neuroscience Research

      Volume: 143 Pages: 1-12

    • DOI

      10.1016/j.neures.2018.08.002

    • NAID

      120006866799

    • URL

      https://ocu-omu.repo.nii.ac.jp/records/2020118

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Reconstructing Neuronal Circuitry from Parallel Spike Trains2018

    • Author(s)
      Ryota Kobayashi, Shuhei Kurita, Katsunori Kitano, Kenji Mizuseki, Barry J. Richmond, Shigeru Shinomoto
    • Journal Title

      bioRxiv

      Volume: - Pages: 1-14

    • DOI

      10.1101/334078

    • NAID

      120006728081

    • Related Report
      2018 Annual Research Report
    • Open Access / Int'l Joint Research
  • [Journal Article] Hippocampal information processing across sleep/wake cycles2017

    • Author(s)
      Mizuseki,K., and Miyawaki,H.
    • Journal Title

      Neurosci. Res.

      Volume: 118 Pages: 30-47

    • DOI

      10.1016/j.neures.2017.04.018

    • NAID

      120006360996

    • URL

      https://ocu-omu.repo.nii.ac.jp/records/2020117

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Speed representation in the hippocampus and entorhinal cortex2019

    • Author(s)
      岩瀬元貞、北西卓磨、水関健司
    • Organizer
      第9回アジア・オセアニア生理学会連合大会&第96回日本生理学会合同大会
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Optogenetic identification of subicular projection targets during large-scale recording2018

    • Author(s)
      Kenji Mizuseki
    • Organizer
      Joint symposium of 10th optogenetics research conference and second international symposium on brain information dynamics 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 海馬、嗅内皮質における速度表現2018

    • Author(s)
      岩瀬元貞、北西卓磨、水関健司
    • Organizer
      第41回日本神経科学大会
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 海馬・扁桃体・前頭前野による記憶と行動決定のメカニズム2018

    • Author(s)
      水関健司
    • Organizer
      遺伝研研究会 遺伝要因と環境の相互作用による行動決定のメカニズム
    • Related Report
      2018 Annual Research Report
  • [Presentation] Large-scale extracellular recording to uncover the mechanism of generating spatial coding in the hippocampus2018

    • Author(s)
      北西卓磨、水関健司
    • Organizer
      新学術領域「生物移動情報学」国際シンポジウム
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Temporal coordination of neuronal activity in the entorhinal-hippocampal loop2018

    • Author(s)
      Kenji Mizuseki
    • Organizer
      The 4th CiNet Conference - Functional and anatomical connectivity, Center for Information and Neural Networks (CiNet)
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Regulation of neuronal excitability by REM sleep2018

    • Author(s)
      Kenji Mizuseki
    • Organizer
      Grant-in-Aid for Scientific Research on Innovative Areas, “Principles of memory dynamism elucidated from a diversity of learning systems” 2018 Workshop and Meeting
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] 海馬の神経回路における情報処理機構2018

    • Author(s)
      水関 健司
    • Organizer
      名古屋大学 環境医学研究所セミナー
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] 睡眠時における海馬の情報処理機構2017

    • Author(s)
      水関 健司
    • Organizer
      日本睡眠学会
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] 海馬の情報処理機構2017

    • Author(s)
      水関 健司
    • Organizer
      大阪市立大学 杉本・阿倍野ライフサイエンス談話会
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] 海馬の神経回路における情報処理機構2017

    • Author(s)
      水関 健司
    • Organizer
      大阪大学大学院生命機能研究科 生命機能研究科セミナー
    • Related Report
      2017 Research-status Report
    • Invited
  • [Book] Handbook of Sleep Research2019

    • Author(s)
      Mizuseki,K., and Miyawaki,H.
    • Publisher
      Elsevier
    • Related Report
      2018 Annual Research Report
  • [Book] ブレインサイエンス・レビュー 20182018

    • Author(s)
      水関健司
    • Total Pages
      32
    • Publisher
      クバプロ
    • Related Report
      2018 Annual Research Report
  • [Remarks] 大阪市立大学医学部 神経生理学教室

    • URL

      http://www.med.osaka-cu.ac.jp/physiology2/index.html

    • Related Report
      2018 Annual Research Report
  • [Remarks] 大阪市立大学医学部 神経生理学教室

    • URL

      http://www.med.osaka-cu.ac.jp/physiology2/

    • Related Report
      2017 Research-status Report
  • [Remarks] 大阪市立大学大学院医学研究科 神経生理学

    • URL

      http://www.med.osaka-cu.ac.jp/departments/bunshi-cellsignaling.shtml

    • Related Report
      2017 Research-status Report
  • [Remarks] google scholar citations

    • URL

      https://scholar.google.com/citations?user=Yfq0HloAAAAJ&hl=en

    • Related Report
      2017 Research-status Report
  • [Remarks] ResearcherID

    • URL

      http://www.researcherid.com/ProfileView.action?SID=U2CKOS4B8uP7NxEuUB4&returnCode=ROUTER.Success&queryString=KG0UuZjN5Wmgu8pvTYBecFnF160J2BGXTakfdOBaKFY%253D&SrcApp=CR&Init=Yes

    • Related Report
      2017 Research-status Report
  • [Remarks] researchmap

    • URL

      https://researchmap.jp/kenjimizuseki/?lang=japanese

    • Related Report
      2017 Research-status Report

URL: 

Published: 2017-07-21   Modified: 2020-03-30  

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