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Single-molecule measurement of the effective temperature in living cells

Research Project

Project/Area Number 17K19511
Research Category

Grant-in-Aid for Challenging Research (Exploratory)

Allocation TypeMulti-year Fund
Research Field Biomedical structure and function and related fields
Research InstitutionThe University of Tokyo

Principal Investigator

Yasushi Okada  東京大学, 大学院理学系研究科(理学部), 教授 (50272430)

Project Period (FY) 2017-06-30 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Fiscal Year 2018: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2017: ¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Keywords軸索輸送 / 細胞内混雑 / キネシン / ゆらぎ / 拡散 / 非平衡 / 揺らぎ / 一分子追跡 / 温度 / ブラウン運動
Outline of Final Research Achievements

The motile properties of the transporting vesicles in living cells are beyond our expectations from those measured with in vitro experiments. The crowded cytoplasmic environment poses about 1000 times stronger viscous resistance on the transporting vesicles than in vitro, but still they move even four times faster. We have surmised that the active fluctuations in the living cytoplasm would play some roles. In this study, we have focused on the "effective temperature" as the quantitative measure for the active fluctuations in the living cytoplasm, and have developed methods to measure it.

Academic Significance and Societal Importance of the Research Achievements

神経細胞の軸索輸送の速度の低下は、さまざまな神経変性疾患の発症に関係している。一方、細胞の中は満員電車並みの混雑環境であり、in vitroの1000倍もの負荷がかかっているにもかかわらず、健康な神経細胞での輸送速度はin vitroの4倍に達する。本研究では、そのメカニズムの候補として、細胞内のアクティブなゆらぎに注目し、その定量的な計測方法の開発に取り組んだ。このような計測によって、「細胞の元気さ」を定量化できる可能性が期待される。

Report

(3 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • Research Products

    (21 results)

All 2019 2018 2017 Other

All Journal Article (4 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 4 results,  Open Access: 4 results) Presentation (16 results) (of which Int'l Joint Research: 8 results,  Invited: 16 results) Remarks (1 results)

  • [Journal Article] Investigation of multiple-dynein transport of melanosomes by non-invasive force measurement using fluctuation unit χ2019

    • Author(s)
      Hasegawa Shin、Sagawa Takashi、Ikeda Kazuho、Okada Yasushi、Hayashi Kumiko
    • Journal Title

      Scientific Reports

      Volume: 9 Issue: 1 Pages: 5099-5108

    • DOI

      10.1038/s41598-019-41458-w

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Kinesin-binding-triggered conformation switching of microtubules contributes to polarized transport2018

    • Author(s)
      Shima Tomohiro、Morikawa Manatsu、Kaneshiro Junichi、Kambara Taketoshi、Kamimura Shinji、Yagi Toshiki、Iwamoto Hiroyuki、Uemura Sotaro、Shigematsu Hideki、Shirouzu Mikako、Ichimura Taro、Watanabe Tomonobu M.、Nitta Ryo、Okada Yasushi、Hirokawa Nobutaka
    • Journal Title

      The Journal of Cell Biology

      Volume: 217 Issue: 12 Pages: 4164-4183

    • DOI

      10.1083/jcb.201711178

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Application of the fluctuation theorem for noninvasive force measurement in living neuronal axons2018

    • Author(s)
      Hayashi Kumiko、Tsuchizawa Yuta、Iwaki Mitsuhiro、Okada Yasushi
    • Journal Title

      Molecular Biology of the Cell

      Volume: 29 Issue: 25 Pages: 3017-3025

    • DOI

      10.1091/mbc.e18-01-0022

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A Highly Photostable Near-Infrared Labeling Agent Based on a Phospha-rhodamine for Long-Term and Deep Imaging2018

    • Author(s)
      Grzybowski Marek、Taki Masayasu、Senda Kieko、Sato Yoshikatsu、Ariyoshi Tetsuro、Okada Yasushi、Kawakami Ryosuke、Imamura Takeshi、Yamaguchi Shigehiro
    • Journal Title

      Angewandte Chemie International Edition

      Volume: 57 Issue: 32 Pages: 10137-10141

    • DOI

      10.1002/anie.201804731

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] 世界一高速な超解像顕微鏡、1分子イメージングで生きた細胞の中を見る2019

    • Author(s)
      岡田康志
    • Organizer
      第29回科学技術交流フォーラム
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Regulatory mechanisms of axonal transport investigated by single-molecule and super-resolution live imaging.2019

    • Author(s)
      岡田康志
    • Organizer
      The 66th NIBB Conference/ABiS international symposium.
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Mechanisms of axonal transport investigated by high-speed and high-resolution imaging.2019

    • Author(s)
      岡田康志
    • Organizer
      15th Annual German-Japanese Colloquium
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 高速超解像・一分子イメージングによる生細胞内動態計測2018

    • Author(s)
      岡田康志
    • Organizer
      第2回定量研シンポジウム
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 超解像蛍光顕微鏡の課題とその克服のための技術開発2018

    • Author(s)
      岡田康志
    • Organizer
      第8回JASRIワークショップ
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Biophysical and quantitative analyses of axonal transport using advanced bioimaging techniques2018

    • Author(s)
      岡田康志
    • Organizer
      第41回日本神経科学大会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 生きた細胞の中で分子を見る2018

    • Author(s)
      岡田康志
    • Organizer
      第10回シグナルネットワーク研究会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Imaging based approaches to the mechanobiology of the fast axonal transport2018

    • Author(s)
      岡田康志
    • Organizer
      UBI-MBI Joint Symposium
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 超解像顕微鏡と一分子イメージングの高速化と生細胞観察への応用2018

    • Author(s)
      岡田康志
    • Organizer
      日本物理学会第73回年次大会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 高速超解像ライブセルイメージングでみえないものを観る2018

    • Author(s)
      岡田康志
    • Organizer
      AMEDシンポジウム「イメージング技術の融合による医学・生命科学の新たな地平の開拓」
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Development and application of high-speed super-resolution and single-molecule imaging for cell biology studies2018

    • Author(s)
      岡田康志
    • Organizer
      SPIE BioS
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Development and application of high-speed super-resolution and single-molecule imaging for cell biology studies2018

    • Author(s)
      Yasushi Okada
    • Organizer
      SPIE, BioS
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Development and application of high-speed super-resolution and single-molecule microscopes for nanomedicine2017

    • Author(s)
      Yasushi Okada
    • Organizer
      International Symposium on Nanomedicine (ISNM2017)
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] High-speed high-resolution live cell imaging with confocal microscope optics2017

    • Author(s)
      Yasushi Okada
    • Organizer
      The 3rd East Asia Microscope Conference (EAMC3)
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] The next generation in cello measurement by imaging2017

    • Author(s)
      Yasushi Okada
    • Organizer
      The 69th JSCB annual meeting, President’s symposium
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] Development and application of high-speed, high-resolution quantitative live cell imaging2017

    • Author(s)
      Yasushi Okada
    • Organizer
      The 23rd iCeMS International Symposium
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Remarks] 「ゆらぎの定理」から、細胞内での軸索輸送にかかる力を測定できる

    • URL

      https://www.bdr.riken.jp/jp/news/2019/research014.html

    • Related Report
      2018 Annual Research Report

URL: 

Published: 2017-07-21   Modified: 2020-03-30  

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