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Measuring force generated by membrane translocation of protein

Research Project

Project/Area Number 17K19528
Research Category

Grant-in-Aid for Challenging Research (Exploratory)

Allocation TypeMulti-year Fund
Research Field Biomedical structure and function and related fields
Research InstitutionNara Institute of Science and Technology

Principal Investigator

Haruyama Takamitsu  奈良先端科学技術大学院大学, 先端科学技術研究科, 博士研究員 (10792202)

Project Period (FY) 2017-06-30 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Fiscal Year 2018: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2017: ¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Keywords高速原子間力顕微鏡 / 膜蛋白質 / ナノディスク / 膜タンパク質 / 原子間力顕微鏡 / 1分子計測(SMD) / 生物物理 / 蛋白質 / 脂質 / 走査プローブ顕微鏡
Outline of Final Research Achievements

The aim of this study is to measure the force generated by membrane translocation of protein which is one of the essential biological process by high-speed atomic force microscopy (high-speed AFM). First, we constructed a system to evaluate the mechanical properties of the membrane translocation reaction using high-speed AFM by embedding the protein-conducting channel into nanodiscs. In the process of constructing a measurement system, we discovered a method for high-speed AFM observation of membrane proteins from different orientations, and this work was published in a peer-reviewed journal as a new method. Now that the measurement system and sample necessary for measuring the force generated by membrane translocation of protein have been prepared, we will measure the force using high-speed AFM.

Academic Significance and Societal Importance of the Research Achievements

蛋白質の膜透過はすべての生物における必須の生命現象であり、蛋白質の膜透過の力を測ることでその力学的特性を評価することは、蛋白質の膜透過機構の解明につながる。今回、蛋白質膜透過チャネル・ナノディスク・高速原子間力顕微鏡を用いて構築した測定系は、蛋白質の膜透過の力を測ることを可能にする。また一方で、その過程で発見した膜蛋白質を二方向から高速原子間力顕微鏡で観察する手法は、様々な膜蛋白質の構造変化の可視化に応用でき、膜蛋白質の機能の解明に寄与することが期待される。

Report

(3 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • Research Products

    (7 results)

All 2019 2018 2017

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Open Access: 3 results) Presentation (4 results) (of which Int'l Joint Research: 1 results)

  • [Journal Article] Single-Unit Imaging of Membrane Protein-Embedded Nanodiscs from Two Oriented Sides by High-Speed Atomic Force Microscopy2019

    • Author(s)
      Haruyama, T. Sugano, Y. Kodera, N. Uchihashi, T. Ando, T. Tanaka, Y. Konno, H. Tsukazaki, T.
    • Journal Title

      Structure

      Volume: 27 Issue: 1 Pages: 152-160

    • DOI

      10.1016/j.str.2018.09.005

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Negatively Charged Lipids Are Essential for Functional and Structural Switch of Human 2-Cys Peroxiredoxin II2018

    • Author(s)
      Haruyama Takamitsu、Uchihashi Takayuki、Yamada Yutaro、Kodera Noriyuki、Ando Toshio、Konno Hiroki
    • Journal Title

      Journal of Molecular Biology

      Volume: 430 Issue: 5 Pages: 602-610

    • DOI

      10.1016/j.jmb.2017.12.020

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 2.8-A crystal structure of Escherichia coli YidC revealing all core regions, including flexible C2 loop2018

    • Author(s)
      Tanaka Yoshiki、Izumioka Akiya、Abdul Hamid Aisyah、Fujii Akira、Haruyama Takamitsu、Furukawa Arata、Tsukazaki Tomoya
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 505 Issue: 1 Pages: 141-145

    • DOI

      10.1016/j.bbrc.2018.09.043

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] High-speed AFM imaging of membrane protein embedded in Nanodisc2018

    • Author(s)
      Takamitsu Haruyama, Yasunori Sugano, Yoshiki Tanaka, Hiroki Konno, Tomoya Tsukazaki
    • Organizer
      The 6th International Symposium on Dynamical Ordering of Biomolecular Systems for Creation of Integrated Functions
    • Related Report
      2018 Annual Research Report 2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] ナノディスクに再構成した膜タンパク質の高速AFM観察2018

    • Author(s)
      春山隆充、菅野泰功、古寺哲幸、内橋貴之、安藤敏夫、田中良樹、紺野宏記、塚崎智也
    • Organizer
      第15回 21世紀大腸菌研究会
    • Related Report
      2018 Annual Research Report
  • [Presentation] High-speed AFM imaging of membrane protein reconstituted in nanodisc2018

    • Author(s)
      Takamitsu Haruyama, Yasunori Sugano, Noriyuki Kodera, Takayuki Uchihashi, Toshio Ando, Yoshiki Tanaka, Hiroki Konno, Tomoya Tsukazaki
    • Organizer
      第18回 日本蛋白質科学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] High-speed AFM observation of membrane protein embedded in Nanodisc2017

    • Author(s)
      Takamitsu Haruyama, Yasunori Sugano, Yoshiki Tanaka, Hiroki Konno, Tomoya Tsukazaki
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Research-status Report

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Published: 2017-07-21   Modified: 2020-03-30  

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