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Observation and formulation of the coordination processes of circadian rhythms in plants

Research Project

Project/Area Number 17KT0022
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeMulti-year Fund
Section特設分野
Research Field Constructive Systems Biology
Research InstitutionKyoto University

Principal Investigator

OYAMA Tokitaka  京都大学, 理学研究科, 准教授 (30324396)

Co-Investigator(Kenkyū-buntansha) 市川 正敏  京都大学, 理学研究科, 講師 (40403919)
Project Period (FY) 2017-07-18 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥16,770,000 (Direct Cost: ¥12,900,000、Indirect Cost: ¥3,870,000)
Fiscal Year 2019: ¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2018: ¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Fiscal Year 2017: ¥7,410,000 (Direct Cost: ¥5,700,000、Indirect Cost: ¥1,710,000)
Keywords概日リスム / 生物発光 / 植物発生 / 概日リズム / 概日時計
Outline of Final Research Achievements

The plant circadian system is based on self-sustained cellular oscillations and is utilized to adjust physiological processes harmonically in daily environmental changes. In this research, coordination processes of circadian rhythms in proliferating plants were elucidated; the processes in the development and aging of a plant organ and characteristics of cellular circadian oscillators were understood. By observing transgenic duckweed plants showing bioluminescence circadian rhythms, parent-daughter transmission of time information in the clonally proliferating plants and dynamic pattern formation of time of cellular oscillators in the plant body were elucidated. Circadian properties of isolated cells and a circadian rhythm uncoupled with the cellular oscillator were also analyzed. For the coordination of time in developing plants, a model in which the coupling strength between cellular oscillators is decreasing during the development and aging has been proposed.

Academic Significance and Societal Importance of the Research Achievements

本研究の成果は、植物個体増殖する際にどのような時間秩序形成を行うかを初めて明確に示した点で、時間生物学分野で重要な意味を持った。分裂組織から成熟個体まで発生しても細胞間相互作用を軸に、自律的な秩序形成を行えることを示した点で、概日時計システムのみならず、他の様々な細胞自律的システムの時空間的制御の理解を助ける事例となると期待される。本研究で用いたウキクサ植物は近年、産業応用可能な新たな有用植物として期待されており、研究成果の昼夜環境対策などのウキクサ栽培技術への応用に加えて、ウキクサ植物用に本研究で開発された様々な研究手法は今後の応用研究の基盤になると期待される。

Report

(5 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • 2018 Research-status Report
  • 2017 Research-status Report
  • Research Products

    (55 results)

All 2021 2020 2019 2018 2017 Other

All Int'l Joint Research (2 results) Journal Article (13 results) (of which Int'l Joint Research: 2 results,  Open Access: 6 results,  Peer Reviewed: 10 results,  Acknowledgement Compliant: 2 results) Presentation (37 results) (of which Int'l Joint Research: 6 results,  Invited: 3 results) Book (3 results)

  • [Int'l Joint Research] Tel Aviv University(イスラエル)

    • Related Report
      2019 Research-status Report
  • [Int'l Joint Research] Tel Aviv Univ, Sch Plant Sci Food Sec(イスラエル)

    • Related Report
      2018 Research-status Report
  • [Journal Article] An endogenous basis for synchronization manners of the circadian rhythm in proliferating Lemna minor plants2021

    • Author(s)
      Ueno Kenya、Ito Shogo、Oyama Tokitaka
    • Journal Title

      bioRxiv

      Volume: -

    • DOI

      10.1101/2021.02.09.430421

    • Related Report
      2020 Annual Research Report
    • Open Access
  • [Journal Article] Detection of uncoupled circadian rhythms in individual cells of Lemna minor using a dual-color bioluminescence monitoring system2021

    • Author(s)
      Watanabe Emiri、Isoda Minako、Muranaka Tomoaki、Ito Shogo、Oyama Tokitaka
    • Journal Title

      Plant and Cell Physiology

      Volume: - Issue: 5 Pages: 815-826

    • DOI

      10.1093/pcp/pcab037

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Application of Single-Cell Bioluminescent Imaging to Monitor Circadian Rhythms of Individual Plant Cells2020

    • Author(s)
      Muranaka Tomoaki、Oyama Tokitaka
    • Journal Title

      Bioluminescent Imaging, Methods in Molecular Biology

      Volume: 1098 Pages: 231-242

    • DOI

      10.1007/978-1-4939-9940-8_17

    • ISBN
      9781493999392, 9781493999408
    • Related Report
      2020 Annual Research Report
  • [Journal Article] Monitoring single-cell bioluminescence of <i>Arabidopsis</i> leaves to quantitatively evaluate the efficiency of a transiently introduced CRISPR/Cas9 system targeting the circadian clock gene <i>ELF3</i>2019

    • Author(s)
      Kanesaka Yuki、Okada Masaaki、Ito Shogo、Oyama Tokitaka
    • Journal Title

      Plant Biotechnology

      Volume: 36 Issue: 3 Pages: 187-193

    • DOI

      10.5511/plantbiotechnology.19.0531a

    • NAID

      130007724760

    • ISSN
      1342-4580, 1347-6114
    • Year and Date
      2019-09-25
    • Related Report
      2019 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] A solvable model of entrainment ranges for the circadian rhythm under light/dark cycles2019

    • Author(s)
      Takakura Ren、Ichikawa Masatoshi、Oyama Tokitaka
    • Journal Title

      BioRxiv

      Volume: -

    • DOI

      10.1101/683615

    • Related Report
      2019 Research-status Report
    • Open Access
  • [Journal Article] Community composition and methane oxidation activity of methanotrophs associated with duckweeds in a fresh water lake.2019

    • Author(s)
      Iguchi, H., Umeda, R., Taga, H., Oyama, T., Yurimoto, H., Sakai, Y.
    • Journal Title

      J. Biosci. Bioeng.

      Volume: in press Issue: 4 Pages: 450-455

    • DOI

      10.1016/j.jbiosc.2019.04.009

    • NAID

      120006724639

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] Use of a duckweed species, <i>Wolffiella hyalina</i>, for whole-plant observation of physiological behavior at the single-cell level2018

    • Author(s)
      Isoda Minako、Oyama Tokitaka
    • Journal Title

      Plant Biotechnology

      Volume: 35 Issue: 4 Pages: 387-391

    • DOI

      10.5511/plantbiotechnology.18.0721a

    • NAID

      130007599214

    • ISSN
      1342-4580, 1347-6114
    • Year and Date
      2018-12-25
    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Long-term monitoring of bioluminescence circadian rhythms of cells in a transgenic <i>Arabidopsis</i> mesophyll protoplast culture2018

    • Author(s)
      Nakamura Shunji、Oyama Tokitaka
    • Journal Title

      Plant Biotechnology

      Volume: 35 Issue: 3 Pages: 291-295

    • DOI

      10.5511/plantbiotechnology.18.0515a

    • NAID

      130007495564

    • ISSN
      1342-4580, 1347-6114
    • Year and Date
      2018-09-25
    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] KaiC family proteins integratively control temperature-dependent UV resistance in Methylobacterium extorquens AM12018

    • Author(s)
      Iguchi Hiroyuki、Yoshida Yusuke、Fujisawa Kento、Taga Hiroki、Yurimoto Hiroya、Oyama Tokitaka、Sakai Yasuyoshi
    • Journal Title

      Environmental Microbiology Reports

      Volume: 10 Issue: 6 Pages: 634-643

    • DOI

      10.1111/1758-2229.12662

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] 細胞レベルの概日リズム測定からわかる植物の時間秩序2018

    • Author(s)
      小山時隆
    • Journal Title

      時間生物学

      Volume: 24 Pages: 16-22

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] Monitoring circadian rhythms of individual cells in plants.2018

    • Author(s)
      Muranaka, T., Oyama, T.
    • Journal Title

      J. Plant Res.

      Volume: 131 Issue: 1 Pages: 15-21

    • DOI

      10.1007/s10265-017-1001-x

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Synchrony of plant cellular circadian clocks with heterogeneous properties under light/dark cycles2017

    • Author(s)
      Masaaki Okada, Tomoaki Muranaka, Shogo Ito, Tokitaka Oyama
    • Journal Title

      Scientific Reports

      Volume: 7 Issue: 1 Pages: 317-317

    • DOI

      10.1038/s41598-017-00454-8

    • NAID

      120007192997

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Early evolution of the land plant circadian clock2017

    • Author(s)
      117.Linde, A. M.*, Eklund, D. M.*, Kubota, K.*, Pederson, E. R. A., Holm, K., Gyllenstrand, N., Nishihama, R., Cronberg, N., Muranaka, T., Oyama, T., Kohchi, T., and Lagercrantz, U. * co-first
    • Journal Title

      New Phytologists

      Volume: 印刷中 Issue: 2 Pages: 569-590

    • DOI

      10.1111/nph.14487

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Presentation] シロイヌナズナの単離細胞における細胞間コミュニケーションが与える細胞概日リズムの安定性への影響2021

    • Author(s)
      中村 駿志、小山 時隆
    • Organizer
      第62回日本植物生理学会年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 2波長発光レポーター測定系を用いたウキクサの細胞内非連結性リズムの挙動の解析2021

    • Author(s)
      渡邊 絵美理、伊藤 照悟、小山 時隆
    • Organizer
      第62回日本植物生理学会年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 温度条件がシロイヌナズナの単離細胞の概日時計に与える影響の解析2020

    • Author(s)
      中村 駿志、小山 時隆
    • Organizer
      日本植物学会第84回大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] コウキクサにみられる細胞内非連結性概日リズムの解析2020

    • Author(s)
      渡邊 絵美理、伊藤 照悟、小山 時隆
    • Organizer
      第27回時間生物学会学術大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] シロイヌナズナの単離細胞を用いた温度補償性の細胞基盤の解析2020

    • Author(s)
      中村 駿志、小山 時隆
    • Organizer
      第27回時間生物学会学術大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] シロイヌナズナの単離した細胞を用いた細胞概日リズムの安定性の解析2020

    • Author(s)
      中村 駿志、伊藤 照悟、小山 時隆
    • Organizer
      第61回日本植物生理学会年会(大阪大学)
    • Related Report
      2019 Research-status Report
  • [Presentation] 波長の異なる概日発光レポーターの共導入によるウキクサの細胞内非連結性リズムの観測2020

    • Author(s)
      渡邊絵美理,伊藤照悟,小山時隆
    • Organizer
      第61回日本植物生理学会年会(大阪大学)
    • Related Report
      2019 Research-status Report
  • [Presentation] Circadian rhythms and single-cell analysis in duckweed2019

    • Author(s)
      Tokitaka Oyama
    • Organizer
      The 5th International Conference on Duckweed Research and Applications, Weizmann Institute of Science. Rehovot, Israel
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Analysis of floral induction by salicylic acid in a duckweed, Wolffiella hyalina2019

    • Author(s)
      Minako Isoda, Shogo Ito, Tokitaka Oyama
    • Organizer
      The 5th International Conference on Duckweed Research and Applications, Weizmann Institute of Science. Rehovot, Israel
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] Photoperiodic and stress-induced flowering of Lemna minor 55122019

    • Author(s)
      Shogo Ito, Tokitaka Oyama
    • Organizer
      The 5th International Conference on Duckweed Research and Applications, Weizmann Institute of Science. Rehovot, Israel
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] 細胞から見る植物概日リズム2019

    • Author(s)
      小山時隆
    • Organizer
      第26回日本時間生物学会学術大会・シンポジウム「細胞・組織・個体に表出されるリズムの自律性と非自律性の分界」(金沢文化ホール)
    • Related Report
      2019 Research-status Report
  • [Presentation] 波長の異なる概日発光レポーターの共導入によるウキクサの細胞内非連結性リズムの観測2019

    • Author(s)
      上野賢也、磯田珠奈子、伊藤照悟、小山時隆
    • Organizer
      第26回日本時間生物学会学術大会(金沢市文化ホール)
    • Related Report
      2019 Research-status Report
  • [Presentation] コウキクサの細胞内非連結性リズムの2波長発光レポーター測定系による検出2019

    • Author(s)
      渡邊絵美理、伊藤照悟、小山時隆
    • Organizer
      第26回日本時間生物学会学術大会(金沢市文化ホール)
    • Related Report
      2019 Research-status Report
  • [Presentation] 弱光および局所的な明暗刺激を与えたウキクサ個体の概日リズムの応答2019

    • Author(s)
      吉永彩夏、四方純、伊藤照悟、小山時隆
    • Organizer
      第26回日本時間生物学会学術大会(金沢市文化ホール)
    • Related Report
      2019 Research-status Report
  • [Presentation] 異なる温度環境下でのウキクサ植物Lemna属とWolffiella属の概日リズム特性の比較2019

    • Author(s)
      磯田珠奈子、小山時隆
    • Organizer
      第26回日本時間生物学会学術大会(金沢市文化ホール)
    • Related Report
      2019 Research-status Report
  • [Presentation] シロイヌナズナの葉と根における光応答に対する細胞概日リズム特性の解析2019

    • Author(s)
      中村駿志、伊藤照悟、小山時隆
    • Organizer
      第26回日本時間生物学会学術大会(金沢市文化ホール)
    • Related Report
      2019 Research-status Report
  • [Presentation] SIngle cell circadian analysis in duckweed2019

    • Author(s)
      Tokitaka Oyama
    • Organizer
      Plant & Animal Genome Conference 2019
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 細胞の概日リズム表現型 に基づいた一過的導入 CRISPR/Cas9システムの定 量的な評価2019

    • Author(s)
      金坂侑紀,岡田全朗,荒木 崇,小山時隆
    • Organizer
      第60回日本植物生理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] 日長条件と環境ストレスによるウ キクサ植物(Wolffiella hyalina)の花成誘導2019

    • Author(s)
      磯田珠奈子,伊藤照悟,小山時隆
    • Organizer
      第60回日本植物生理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] 植物細胞で2 遺伝子発現同時モニタリンクを可能にする2波長発光レポーター測定系の開発2019

    • Author(s)
      渡邊絵美理,伊藤照悟,小山時隆
    • Organizer
      第60回日本植物生理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] コウキクサ Lemna minor,キタグニコウキクサ L. turioniferaにおける遺伝子過剰発現・欠損変異体作成の技術開発2019

    • Author(s)
      伊藤照悟,小山時隆
    • Organizer
      第60回日本植物生理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] 局所的な明暗刺激を受けているウキクサ個体の概日リズムの空間的な同調様式と同調過程の観測2019

    • Author(s)
      吉永彩夏,四方純,伊藤照悟,小山時隆
    • Organizer
      第60回日本植物生理学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] Properties of cellular circadian rhythms in plants2018

    • Author(s)
      Tokitaka Oyama
    • Organizer
      12th International Congress of the International Plant Molecular Biology
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 明暗周期に対する概日リズムの同期モデリング2018

    • Author(s)
      高蔵蓮,市川正敏,小山時隆
    • Organizer
      第25回日本時間生物学会学術大会
    • Related Report
      2018 Research-status Report
  • [Presentation] クローン増殖中の植物個体間に見られる概日リズムの位相差形成様式の解析2018

    • Author(s)
      中澤詩風 上野賢也 伊藤照悟 小山時隆
    • Organizer
      第25回日本時間生物学会学術大会
    • Related Report
      2018 Research-status Report
  • [Presentation] 培地内スクロース濃度の周期的な変化がウキクサ植物の概日時計にもたらす同調効果2018

    • Author(s)
      小川晃 伊藤照悟 小山時隆
    • Organizer
      第25回日本時間生物学会学術大会
    • Related Report
      2018 Research-status Report
  • [Presentation] Lemna 属と Wolffiella 属のウキクサ種間での概日リズム特性の比較解析2018

    • Author(s)
      磯田珠奈子 小山時隆
    • Organizer
      第25回日本時間生物学会学術大会
    • Related Report
      2018 Research-status Report
  • [Presentation] Wolffiella属のウキクサ植物種の概日リズム特性の比較解析2018

    • Author(s)
      磯田珠奈子,小山時隆
    • Organizer
      第59回植物生理学会年会
    • Related Report
      2017 Research-status Report
  • [Presentation] AtCCA1::LUCシロイヌナズナ葉の単離細胞を用いた単一細胞概日リズム解析2018

    • Author(s)
      中村駿志,伊藤照悟,小山時隆
    • Organizer
      第59回植物生理学会年会
    • Related Report
      2017 Research-status Report
  • [Presentation] シロイヌナズナ概日時計の葉における細胞自律性の解析2018

    • Author(s)
      岡田全朗,小山時隆
    • Organizer
      第59回植物生理学会年会
    • Related Report
      2017 Research-status Report
  • [Presentation] 光周期依存的なキタグニコウキクサ(Lemna turionifera)の休眠越冬芽(Turion)形成2018

    • Author(s)
      伊藤照悟,小山時隆
    • Organizer
      第59回植物生理学会年会
    • Related Report
      2017 Research-status Report
  • [Presentation] Characterization of circadian rhythms of a genus of duckweed plants(Wolffiella).2017

    • Author(s)
      Minako Isoda, Tokitaka Oyama
    • Organizer
      Taiwan-Japan Plant Biology
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] シロイヌナズナ細胞概日時計の不均一性と細胞自律性の定量的評価2017

    • Author(s)
      岡田 全朗、小山 時隆
    • Organizer
      第24回日本時間生物学会学術大会
    • Related Report
      2017 Research-status Report
  • [Presentation] キタグニコウキクサ(Lemna turionifera)における光周期依存的な休眠越冬芽形成2017

    • Author(s)
      伊藤 照悟、小山 時隆
    • Organizer
      第24回日本時間生物学会学術大会
    • Related Report
      2017 Research-status Report
  • [Presentation] 植物の単離プロトプラストを用いた細胞発光概日リズム測定系2017

    • Author(s)
      中村 駿志、伊藤 照悟、小山 時隆
    • Organizer
      第24回日本時間生物学会学術大会
    • Related Report
      2017 Research-status Report
  • [Presentation] 自由継続周期の異なる近縁植物(Wolffiella属)を用いた明暗周期に対する概日リズムの同調性の比較2017

    • Author(s)
      磯田 珠奈子、小山 時隆
    • Organizer
      第24回日本時間生物学会学術大会
    • Related Report
      2017 Research-status Report
  • [Presentation] ウキクサ個体内の概日リズムの位相に見られる空間パターンの解析2017

    • Author(s)
      上野 賢也、中澤 詩風、伊藤 照悟、小山 時隆
    • Organizer
      第24回日本時間生物学会学術大会
    • Related Report
      2017 Research-status Report
  • [Book] The application of single cell bioluminescent imaging to monitor circadian rhythms of individual plant cells. In “Methods in Molecular Biology - Bioluminescent Imaging” p231-2422020

    • Author(s)
      Muranaka T, Oyama T
    • Total Pages
      246
    • Publisher
      Humana Press (Springer Nature)
    • ISBN
      9781493999392
    • Related Report
      2019 Research-status Report
  • [Book] 村中智明、小山時隆 "植物個体内の単一細胞発光モニタリング" 実験医学別冊 『発光イメージング実験ガイド』 145- 158頁2019

    • Author(s)
      村中智明、小山時隆
    • Total Pages
      222
    • Publisher
      羊土社
    • Related Report
      2019 Research-status Report
  • [Book] "生き物の時計 生き物の時間", 星雲, 第61号 58-66頁2019

    • Author(s)
      小山時隆
    • Total Pages
      555
    • Publisher
      中山報恩会
    • Related Report
      2019 Research-status Report

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Published: 2017-07-21   Modified: 2022-12-28  

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