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Research on Advanced Natural Language Processing and Text Mining

Research Project

Project/Area Number 18002007
Research Category

Grant-in-Aid for Specially Promoted Research

Allocation TypeSingle-year Grants
Review Section Science and Engineering
Engineering
Research InstitutionThe University of Tokyo

Principal Investigator

TSUJII Junichi  The University of Tokyo, 大学院・情報理工学系研究科, 教授 (20026313)

Co-Investigator(Kenkyū-buntansha) YONEZAWA Akinori  東京大学, 大学院・情報理工学研究科, 教授 (00133116)
TAURA Kenjiro  東京大学, 大学院・情報理工学研究科, 准教授 (90282714)
MIYAO Yusuke  東京大学, 大学院・情報理工学研究科, 助教 (00343096)
MATSUZAKI Takuya  東京大学, 大学院・情報理工学研究科, 助教 (40463872)
Research Collaborator KANO Yoshinobu  東京大学, 大学院・情報学環, 特任研究員
OHTA Tomoko  東京大学, 大学院・情報学環, 特任研究員
SAETRE Rune  東京大学, 大学院・情報学環, 特任研究員
SHIBATA Takeshi  東京大学, 大学院・情報学環, 特任研究員
MIWA Makoto  東京大学, 大学院・情報学環, 特任研究員
PYYSALO SAMPO Mikael  東京大学, 大学院・情報学環, 特任研究員
KIM Jin-Dong  東京大学, 大学院・情報学環, 特任講師
SAGAE Kenji  東京大学, 大学院・情報理工学系研究科, 特任研究員
SAGAE T. Alicia  東京大学, 大学院・情報理工学系研究科, リサーチアシスタント
WANG Xiangli  東京大学, 大学院・情報理工学系研究科, 特任研究員
TSUNAKAWA Takashi  東京大学, 大学院・情報理工学系研究科, 特任研究員
HARA Tadayoshi  東京大学, 大学院・情報学環, 特任研究員
Project Period (FY) 2006 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥499,330,000 (Direct Cost: ¥384,100,000、Indirect Cost: ¥115,230,000)
Fiscal Year 2010: ¥95,030,000 (Direct Cost: ¥73,100,000、Indirect Cost: ¥21,930,000)
Fiscal Year 2009: ¥103,220,000 (Direct Cost: ¥79,400,000、Indirect Cost: ¥23,820,000)
Fiscal Year 2008: ¥101,010,000 (Direct Cost: ¥77,700,000、Indirect Cost: ¥23,310,000)
Fiscal Year 2007: ¥104,910,000 (Direct Cost: ¥80,700,000、Indirect Cost: ¥24,210,000)
Fiscal Year 2006: ¥95,160,000 (Direct Cost: ¥73,200,000、Indirect Cost: ¥21,960,000)
Keywords言語理解 / 意味処理 / テキストマイニング / 文脈処理 / 知的検索
Research Abstract

The objective of the project was to apply the methodology of combining statistical modeling with structure-based symbolic processing, which had proven successful in sentence parsing, to more challenging tasks such as deep semantic processing, knowledge-based information extraction and contextual processing. We have achieved significant results in (1) efficient and robust deep parsing based on a linguistically sound formalism, (2) a large scale semantically annotated corpus for the biology domain (GENIA corpus), (3) information extraction programs (named entity recognizers and event recognizers) for the biology domain which combine the deep parsing in (1) and structural machine learning algorithms, and (4) Workflow software for data-centered parallel processing.
The GENIA corpus in (2) has been recognized as the gold standard corpus for research of text mining for biology and has been used by many groups in the world. It was adopted as the training and test corpus for international shared task competition twice (BioNLP 09 and BioNLP 11). The extraction programs developed in (3) successfully showed the state of the art performance in these international shared task competitions. The system based on (1) and (4) showed that the technology developed by this project was practical for processing the real world text. We successfully processed the whole of MEDLINE (20 million abstracts, more than 2 billion sentences) and indexed them semantically in less than a week. The processing results of MEDLINE has been made publicly available through an intelligent document retrieval system (MEDIE)

Report

(10 results)
  • 2016 Abstract(Follow-up Assessment) ( PDF )   Self-evaluation (Follow-up Assessment) ( PDF )   Comments (Follow-up Assessment) ( PDF )
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report   Self-evaluation Report ( PDF )
  • 2007 Annual Research Report
  • 2006 Annual Research Report
  • Research Products

    (239 results)

All 2011 2010 2009 2008 2007 2006 Other

All Journal Article (143 results) (of which Peer Reviewed: 97 results) Presentation (83 results) Book (6 results) Remarks (6 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] Effective use of Dependency Structure for Bilingual Lexicon Creation.2011

    • Author(s)
      Andrade D, Matsuzaki T, Tsujii J
    • Journal Title

      Proceedings of the 12th International Conference on Computational Linguistics and Intelligent Text Processing (CICLing 2011), Lecture Notes in Computer Science. 6609.

      Pages: 80-92

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Multi-Topical Discussion Summarization using Structured Lexical Chains and Cue Words.2011

    • Author(s)
      Hatori J, Murakami A, Tsujii J
    • Journal Title

      Proceedings of the 12th International Conference on Computational Linguistics and Intelligent Text Processing (CICLing 2011), Lecture Notes in Computer Science. 6609.

      Pages: 313-327

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Named Entity Recognition for Bacterial Type IV Secretion Systems.2011

    • Author(s)
      Ananiadou S, Sullivan D, Black W, Levow G-A, Gillespie JJ, Mao CH, Pyysalo S, Kolluru BK, Tsujii J, Sobral B
    • Journal Title

      PLoS ONE

      Volume: 6(3)

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Building a High Quality Sense Inventory for Improved Abbreviation Disambiguation. Bioinformatics.2010

    • Author(s)
      Okazaki, Naoaki, Sophia Ananiadou, Jun'ichi Tsujii.
    • Journal Title

      Oxford University Press

    • Related Report
      2010 Final Research Report
  • [Journal Article] Bio-Molecular Event Extraction with Markov Logic.2010

    • Author(s)
      Riedel, Sebastian, Rune Saetre, Hong-Woo Chun, Toshihisa Takagi, Jun'ichi Tsujii.
    • Journal Title

      Computational Intelligence. Special Issue. Edmonton, Alberta, Canada T6G 2E8(Jin-Dong Kim (Eds.))

    • Related Report
      2010 Final Research Report
  • [Journal Article] Event Extraction with Complex Event Classification Using Rich Features.2010

    • Author(s)
      Miwa, Makoto, Rune Satre, Jin-Dong Kim, Jun'ichi Tsujii.
    • Journal Title

      Journal of Bioinformatics and Computational Biology (JBCB). 8(1)

      Pages: 131-146

    • Related Report
      2010 Final Research Report
  • [Journal Article] Comparison of Chinese Treebanks for Corpus-oriented HPSG Grammar Development.2010

    • Author(s)
      Yu, Kun, Yusuke Miyao, Takuya Matsuzaki, Xiangli Wang, Yaozhong Zhang, Kiyotaka Uchimoto, Junichi Tsujii.
    • Journal Title

      Journal of Natural Language Processing (Special Issue on Empirical Methods for Asian Language Processing). April

    • NAID

      10027016320

    • Related Report
      2010 Final Research Report
  • [Journal Article] Improve Syntax-based Translation Using Deep Syntactic Structures.2010

    • Author(s)
      Wu, Xianchao, Takuya Matsuzaki, Jun'ichi Tsujii.
    • Journal Title

      Journal of Machine Translation (Special Issue : Pushing the frontiers of SMT). 24(2)Springer

      Pages: 141-157

    • Related Report
      2010 Final Research Report
  • [Journal Article] Extracting Protein-Interactions from Text with the Unified AkaneRE Event Extraction System.2010

    • Author(s)
      Saetre, Rune, Kazuhiro Yoshida, Makoto Miwa, Takuya Matsuzaki, Yoshinobu Kano, Junichi Tsujii.
    • Journal Title

      Transactions on Computational Biology and Bioinformatics (TCBB), BioCreative II.5 Special Issue. 7 IEEE/ACM

      Pages: 46-46

    • Related Report
      2010 Final Research Report
  • [Journal Article] Robust Measurement and Comparison of Context Similarity for Finding Translation Pairs.2010

    • Author(s)
      Andrade D, Nasukawa T, Tsujii J
    • Journal Title

      Proceedings of the 23rd International Conference on Computational Linguistics (COLING 2010)

      Pages: 19-27

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Evaluating Dependency Representation for Event Extraction.2010

    • Author(s)
      Miwa M, Pyysalo S, Hara T, Tsujii J
    • Journal Title

      Proceedings of the 23rd International Conference on Computational Linguistics (COLING 2010)

      Pages: 779-787

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Entity-Focused Sentence Simplification for Relation Extraction.2010

    • Author(s)
      Miwa M, Miyao Y, Saetre R, Tsujii J
    • Journal Title

      Proceedings of the 23rd International Conference on Computational Linguistics (COLING 2010)

      Pages: 788-796

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Semi-automatically Developing Chinese HPSG Grammar from the Penn Chinese Treebank for Deep Parsing.2010

    • Author(s)
      Yu K, Miyao Y, Wang XLi, Matsuzaki T, Tsujii J
    • Journal Title

      Proceedings of the 23rd International Conference on Computational Linguistics (COLING 2010)

      Pages: 1417-1425

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Simple and Efficient Algorithm for Approximate Dictionary Matching.2010

    • Author(s)
      Okazaki N, Tsujii J
    • Journal Title

      Proceedings of the 23rd International Conference on Computational Linguistics (COLING 2010)

      Pages: 851-859

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Forest-guided Supertagger Training.2010

    • Author(s)
      Zhang Y-Z, Matsuzaki T, Tsujii J
    • Journal Title

      Proceedings of the 23rd International Conference on Computational Linguistics (COLING 2010)

      Pages: 1281-1289

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The Gene Normalization and Intractive Systems of the University of Tokyo in the BioCreative III Challenge.2010

    • Author(s)
      Okazaki N, Cho H-C, Saetre R, Pyysalo S, Ohta T, Tsujii J
    • Journal Title

      Proceedings of BioCreative III

      Pages: 125-130

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Entities, Relations, Events : Representing Biomolecular Semantics.2010

    • Author(s)
      Pyysalo, Sampo
    • Journal Title

      BMC Bioinformatics

      Volume: 11(Suppl 5) Pages: 6-6

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] MEDIE and Info-PubMed : 2010 Update.2010

    • Author(s)
      Ohta T, Matsuzaki T, Okazaki N, Miwa M, Saetre R, Pyysalo S, Tsujii J
    • Journal Title

      BMC Bioinformatics

      Volume: 11(Suppl 5) Pages: 7-7

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Text Mining Meets Workflow : Linking U-Compare with Taverna.2010

    • Author(s)
      Kano Y, Dobson P, Nakanishi M, Tsujii J, Ananiadou S
    • Journal Title

      Bioinformatics.

      Volume: 26(19) Pages: 2486-2487

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Improving the Inter-corpora Compatibility for Protein Annotations.2010

    • Author(s)
      Wang Y, Kim J-D, Saetre R, Pyysalo S, Ohta T, Tsujii J
    • Journal Title

      Journal of Bioinformatics and Computational Biology (JBCB)

      Volume: 8(5) Pages: 901-916

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Re-Evaluation of Biomedical Named Entity-Term Relations.2010

    • Author(s)
      Ohta T, Pyysalo S, Kim J-D, Tsujii J
    • Journal Title

      Journal of Bioinformatics and Computational Biology (JBCB)

      Volume: 8(5) Pages: 917-928

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Event Extraction for DNA Methylation.2010

    • Author(s)
      Ohta T, Pyysalo S, Miwa M, Tsujii J
    • Journal Title

      Proceedings of the fourth International Symposium for Semantic Mining in Biomedicine (SMBM 2010)

      Pages: 48-56

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] An Analysis of Gene/Protein Associations at PubMed Scale.2010

    • Author(s)
      Pyysalo S, Ohta T, Tsujii J
    • Journal Title

      Proceedings of the fourth International Symposium for Semantic Mining in Biomedicine (SMBM 2010)

      Pages: 57-65

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Easy and Instantaneous Processing for Data-Intensive Workflows.2010

    • Author(s)
      Dun N, Taura K
    • Journal Title

      Proceedings of the 3rd IEEE Workshop on Many-Task Computing on Grids and Supercomputers (MTAGS 2010)

      Pages: 1-10

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Design and Implementation of GXP make---a Workflow System Based on Make.2010

    • Author(s)
      Kenjiro T, Matsuzaki T, Miwa M, Kamoshida Y, Yokoyama D, Dun N, Shibata T, Choi S-J, Tsujii J
    • Journal Title

      Proceedings of the 2010 IEEE 6th International Conference on e-Science

      Pages: 214-221

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Event Extraction with Complex Event Classification Using Rich Features.2010

    • Author(s)
      Miwa M, Saetre R, Kim J-D, Tsujii J
    • Journal Title

      Journal of Bioinformatics and Computational Biology (JBCB)

      Volume: 8(1) Pages: 131-146

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] DMI:計算資源の動的な参加/脱退をサポートする大規模分散共有メモリインターフェース2010

    • Author(s)
      原健太朗, 田浦健次朗, 近山隆
    • Journal Title

      情報処理学会論文誌:プログラミング

      Volume: 3(1) Pages: 1-40

    • NAID

      110007970935

    • Related Report
      2009 Annual Research Report
  • [Journal Article] Comparison of Chinese Treebanks for Corpus-oriented HPSG Grammar Development.2010

    • Author(s)
      Yu K, Miyao Y, Matsuzaki T, Wang XLi, Zhang YZ, Uchimoto K, Tsujii J
    • Journal Title

      Journal of Natural Language Processing (Special Issue on Empirical Methods for Asian Language Processing)

      Volume: 17(3) Pages: 61-80

    • NAID

      10027016320

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Building a High Quality Sense Inventory for Improved Abbreviation Disambiguation.2010

    • Author(s)
      Okazaki N, Ananiadou S, Tsujii J
    • Journal Title

      Bioinformatics

      Volume: 26(9) Pages: 1246-1253

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Disambiguating the Species of Biomedical Named Entities Using Natural Language Parsers.2010

    • Author(s)
      Wang XLong, Tsujii J, Ananiadou S
    • Journal Title

      Bioinformatics

      Volume: 26(5) Pages: 661-667

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Japanese Particle Corpus Built by Example-Based Annotation.2010

    • Author(s)
      Hanaoka H, Mima H, Tsujii J
    • Journal Title

      Proceedings of the Seventh Conference on International Language Resources and Evaluation (LREC'10)

      Pages: 1876-1880

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] U-Compare : An integrated language resource evaluation platform including a comprehensive UIMA resource library.2010

    • Author(s)
      Kano Y, Dorado R, McCrohon L, Ananiadou S, Tsujii J
    • Journal Title

      Proceedings of the Seventh Conference on International Language Resources and Evaluation (LREC'10)

      Pages: 428-434

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Simple Approach for HPSG Supertagging Using Dependency Information.2010

    • Author(s)
      Zhang YZ, Matsuzaki T, Tsujii J
    • Journal Title

      Proceedings of 11th Annual Conference of the North American Chapter of the Association for Computational Linguistics (NAACL-HLT'10)

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] PathText : a Text Mining Integrator for Biological Pathway Visualizations.2010

    • Author(s)
      Kemper B, Matsuzaki T, Matsuoka Y, Tsuruoka Y, Kitano H, Ananiadou S, Tsujii J
    • Journal Title

      Bioinformatics

      Volume: 26(12)

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Improve Syntax-based Translation Using Deep Syntactic Structures.2010

    • Author(s)
      Wu XC, Matsuzaki T, Tsujii J
    • Journal Title

      Machine Translation (Special Issue : Pushing the frontiers of SMT)

      Volume: 24(2) Pages: 141-157

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] ParaTrac : A Fine-Grained Profiler for Data-Intensive Work flows2010

    • Author(s)
      Dun N, Taura K, Yonezawa A
    • Journal Title

      Proceedings of the 19th ACM International Symposium on High Performance Distributed Computing (HPDC 2010)

      Pages: 37-48

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] File-Access Patterns of Data-Intensive Workflow Applications and their Implications to Distributed Filesystems.2010

    • Author(s)
      Shibata T, Choi SJ, Taura K
    • Journal Title

      Proceedings of the Third International Workshop on Data Intensive Distributed Computing (DIDC 2010)

      Pages: 746-755

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Event Extraction for Systems Biology by Text Mining the Literature.2010

    • Author(s)
      Ananiadou S, Pyysalo S, Tsujii J, Kell DB
    • Journal Title

      Trends in Biotechnology

      Volume: 28(7) Pages: 381-390

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Extracting Protein-Interactions from Text with the Unified AkaneRE Event Extraction System.2010

    • Author(s)
      Saetre R, Yoshida K, Miwa M, Matsuzaki T, Kano Y, Tsujii J
    • Journal Title

      Transactions on Computational Biology and Bioinformatics (TCBB), BioCreative II. 5 Special Issue.

      Volume: 7 Pages: 46-46

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Fine-Grained Tree-to-String Translation Rule Extraction.2010

    • Author(s)
      Wu XC, Matsuzaki T, Tsujii J
    • Journal Title

      Proceedings of The 48th Annual Meeting of the Association for Computational Linguistics (ACL 2010)

      Pages: 325-334

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Event Extraction for Post-Translational Modifications.2010

    • Author(s)
      Ohta T, Pyysalo S, Miwa M, Kim J-D, Tsujii J
    • Journal Title

      Proceedings of the 2010 Workshop on Biomedlcal Natural Language Processing (BioNLP2010)

      Pages: 19-27

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Comparative Study of Syntactic Parsers for Event Extraction.2010

    • Author(s)
      Miwa M, Pyysalo S, Hara T, Tsujii J
    • Journal Title

      Proceedings of the 2010 Workshop on Biomedical Natural Language Processing (BioNLP2010)

      Pages: 37-45

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Towards Event Extraction from Full Texts on Infectious Diseases.2010

    • Author(s)
      Pyysalo S, Ohta T, Cho H-C, Sullivan D, Mao CH, Sobral B, Tsujii J, Ananiadou S
    • Journal Title

      Proceedings of the 2010 Workshop on Biomedical Natural Language Processing (BioNLP2010)

      Pages: 132-140

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The Deep Re-Annotation in a Chinese Scientific Treebank.2010

    • Author(s)
      Yu K, Wang XLi, Miyao Y, Matsuzaki T, Tsujii J
    • Journal Title

      Proceedings of the 4th Linguistic Annotation Workshop

      Pages: 123-126

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Chinese-Japanese Lexical Machine Translation through a Pivot Language.2009

    • Author(s)
      Tsunakawa, Takashi, Naoaki Okazaki, Xiao Liu, Jun'ichi Tsujii.
    • Journal Title

      ACM Transactions on Asian Language Information Processing. 8(2)

    • Related Report
      2010 Final Research Report
  • [Journal Article] Evaluating Contributions of Natural Language Parsers to Protein-Protein Interaction Extraction.2009

    • Author(s)
      Miyao, Yusuke, Kenji Sagae, Rune Saetre, Takuya Matsuzaki, Jun'ichi Tsujii.
    • Journal Title

      Bioinformatics.(Oxford University Press) 25(3)

      Pages: 394-400

    • Related Report
      2010 Final Research Report
  • [Journal Article] Protein-Protein Interaction Extraction by Leveraging Multiple Kernels and Parsers.2009

    • Author(s)
      Miwa, Makoto, Rune Saetre, Yusuke Miyao, Jun'ichi Tsujii.
    • Journal Title

      International Journal of Medical Informatics.(Mining of Clinical and Biomedical Text and Data Special Issue.) 78(12)

    • Related Report
      2010 Final Research Report
  • [Journal Article] On Contribution of Sense Dependencies to Word Sense Disambiguation.2009

    • Author(s)
      Hatori J, Miyao Y, Tsujii J
    • Journal Title

      Journal of Natural Language Processing

      Volume: 16(5) Pages: 51-77

    • NAID

      10025525130

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Investigating Heterogeneous Protein Annotations toward Cross-Corpora Utilization.2009

    • Author(s)
      Wang Y, Kim J-D, Saetre R, Pyysalo S, Tsujii J
    • Journal Title

      BMC Bioinformatics

      Volume: 10(403)

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Evaluating Contributions of Natural Language Parsers to Protein-Protein Interaction Extraction2009

    • Author(s)
      Miyao, Yusuke, Kenji Sagae, Rune Saetre, Takuya Matsuzaki and Jun'ichi Tsujii
    • Journal Title

      Bioinformatics(Oxford University Press) 25(3)

      Pages: 394-400

    • Related Report
      2008 Self-evaluation Report
  • [Journal Article] Evaluating Contributions of Natural Language Parsers to Protein-Protein Interaction Extraction.2009

    • Author(s)
      Miyao, Y., K.Sagae, R.Saetre, T.Matsuzaki, J.Tsujii
    • Journal Title

      Bioinformatics 25(3)

      Pages: 394-400

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Fast Full Parsing by Linear-Chain Conditional Random Fields.2009

    • Author(s)
      Tsuruoka, Y., J.Tsujii, S.Ananiadou
    • Journal Title

      the Proceedings of EACL

      Pages: 790-798

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Text Categorization with All Substring Features.2009

    • Author(s)
      Okanohara, D., J.Tsujii
    • Journal Title

      the Proceedings of the SIAM International Conference on Data Mining (SDM)

      Pages: 838-846

    • NAID

      110006980330

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Chinese-Japanese Lexical Machine Translation through a Pivot Language.2009

    • Author(s)
      Tsunakawa, T., N.Okazaki, X.Liu, J.Tsujii
    • Journal Title

      the Proceedings of the ACM Transactions on Asian Language Information 8(2)

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] U-Compare : share and compare text mining tools with UIMA.2009

    • Author(s)
      Kano, Y., W.A.Baumgartner Jr, L.McCrohon, S.Ananiadou, K.B.Cohen, L.Hunter, J.Tsujii
    • Journal Title

      Bioinformatics 25(15)

      Pages: 1997-1998

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] トポロジ情報を用いた効率的かつ漸近安定な大容量ブロードキャスト2009

    • Author(s)
      柴田剛志, 田浦健次朗
    • Journal Title

      the Proceedings of Advanced Computer Systems (ACS 2009) 2

      Pages: 47-57

    • NAID

      110007990249

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Extracting Bilingual Dictionary from Comparable Corpora with Dependency Heterogeneity.2009

    • Author(s)
      Yu, K., J.Tsujii
    • Journal Title

      the Proceedings of Human Language Technologies : The 2009 Annual Conference of the North American Chapter of the Association for Computational Linguistics (NAACL HLT 2009)

      Pages: 121-124

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Learning Combination Features with L1 Regularization.2009

    • Author(s)
      Okanohara, D., J.Tsujii
    • Journal Title

      the Proceedings of Human Language Technologies : The 2009 Annual Conference of the North American Chapter of the Association for Computational Linguistics (NAACL HLT 2009)

      Pages: 97-100

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Discriminative Latent Variable Chinese Segmenter with Hybrid Word/Character Information.2009

    • Author(s)
      Sun, X., Y.Zhang, T.Matsuzaki, Y.Tsuruoka, J.Tsujii
    • Journal Title

      the Proceedings of Human Language Technologies : The 2009 Annual Conference of the North American Chapter of the Association for Computational Linguistics (NAACL HLT 2009)

      Pages: 56-64

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Semi Supervised Lexicon Mining from Parenthetical Expressions in Monolingual Web Pages.2009

    • Author(s)
      Wu, X., N.Okazaki, J.Tsujii
    • Journal Title

      the Proceedings of Human Language Technologies : The 2009 Annual Conference of the North American Chapter of the Association for Computational Linguistics (NAACL HLT 2009)

      Pages: 424-432

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Static Relations : a Piece in the Biomedical Information Extraction Puzzle.2009

    • Author(s)
      Pyysalo, S., T.Ohta, J.-D.Kim, J.Tsujii
    • Journal Title

      the Proceedings of Natural Language Processing in Biomedicine (BioNLP) NAACL 2009 Workshop

      Pages: 1-9

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] From Protein-Protein Interaction to Molecular Event Extraction.2009

    • Author(s)
      Saetre, R., M.Miwa, K.Yoshida, J.Tsujii
    • Journal Title

      the Proceedings of Natural Language Processing in Biomedicine (BioNLP) NAACL 2009 Workshop

      Pages: 103-106

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Incorporating GENETAG-style annotation to GENIA corpus.2009

    • Author(s)
      Ohta, T., J.-D.Kim, S.Pyysalo, Y.Wang, J.Tsujii
    • Journal Title

      the Proceedings of Natural Language Processing in Biomedicine (BioNLP) NAACL 2009 Workshop

      Pages: 106-107

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Bridging the Gap between Domain-Oriented and Linguistically-Oriented Semantics.2009

    • Author(s)
      Uematsu, S., J.-D.Kim, J.Tsujii
    • Journal Title

      the Proceedings of Natural Language Processing in Biomedicine (BioNLP) NAACL 2009 Workshop

      Pages: 162-170

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Overview of BioNLP'09 Shared Task on Event Extraction.2009

    • Author(s)
      Kim, J.-D., T.Ohta, S.Pyysalo, Y.Kano, J.Tsujii
    • Journal Title

      the Proceedings of the BioNLP 2009 Workshop Companion Volume for Shared Task

      Pages: 1-9

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Integrated NLP Evaluation System for Pluggable Evaluation Metrics with Extensive Interoperable Toolkit.2009

    • Author(s)
      Kano, Y., L.McCrohon, S.Ananiadou, J.Tsujii
    • Journal Title

      the Proceedings of the Software engineering, testing, and quality assurance for natural language processing workshop (SETQA-NLP), NAACL-HLT

      Pages: 22-30

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Sequential Labeling with Latent Variables : An Exact Inference Algorithm and An Efficient Approximation.2009

    • Author(s)
      Sun, X., J.Tsujii
    • Journal Title

      the Proceedings of the 12th Conference of the European Chapter of the Association for Computational Linguistics (EACL 2009)

      Pages: 772-780

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Corpus annotation for mining biomedical events from lterature.2008

    • Author(s)
      Kim, Jin-Dong, Tomoko Ohta, Jun'ichi Tsujii.
    • Journal Title

      BMC Bioinformatics.(BioMed Central) 9(1)

    • Related Report
      2010 Final Research Report
  • [Journal Article] New challenges for text mining : Mapping between text and manually curated pathways.2008

    • Author(s)
      Oda, Kanae, Jin-Dong Kim, Tomoko Ohta, Daisuke Okanohara, Takuya Matsuzaki, Yuka Tateisi, Jun'ichi Tsujii.
    • Journal Title

      BMC Bioinformatics.(BioMed Central) 9(Suppl 3)

    • Related Report
      2010 Final Research Report
  • [Journal Article] Sophia Ananiadou. FACTA : a text search engine for finding associated biomedical concepts.2008

    • Author(s)
      Tsuruoka, Yoshimasa, Jun'ichi Tsujii.
    • Journal Title

      Bioinformatics. 24(21)

      Pages: 2259-2260

    • Related Report
      2010 Final Research Report
  • [Journal Article] Feature Forest Models for Probabilistic HPSG Parsing2008

    • Author(s)
      Miyao, Yusuke, Jun'ichi Tsujii.
    • Journal Title

      Computational Linguistics. 34(1) MIT Press

      Pages: 35-80

    • Related Report
      2010 Final Research Report
  • [Journal Article] Accelerating the annotation of sparse named entities by dynamic sentence selection2008

    • Author(s)
      Tsuruoka, Yoshimasa, Jun'ichi Tsujii, and Sophia Ananiadou
    • Journal Title

      BMC Bioinformatics 9 (Suppl 11)

    • Related Report
      2008 Self-evaluation Report
  • [Journal Article] FACTA: a text search engine for finding associated biomedical concepts2008

    • Author(s)
      Tsuruoka, Yoshimasa, Jun'ichi Tsujii, and Sophia Ananiadou
    • Journal Title

      Bioinformatics 24(21)

      Pages: 2259-60

    • Related Report
      2008 Self-evaluation Report
  • [Journal Article] Combining Multiple Layers of Syntactic Information for Protein-Protein Interaction Extraction.2008

    • Author(s)
      Miwa, M., R.Saetre, Y.Miyao, T.Ohta, J.Tsujii
    • Journal Title

      The Proceedings of the Third International Symposium on Semantic Mining in Biomedicine (SMBM 2008)

      Pages: 101-108

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Exploring the Compatibility of Heterogeneous Protein Annotations Toward Corpus Integration.2008

    • Author(s)
      Wang, Y., J.-D.Kim, R.Sartre, J.Tsujii
    • Journal Title

      The Proceedings of the Third International Symposium on Semantic Mining in Biomedicine (SMBM 2008)

      Pages: 117-124

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Why Biomedical Relation Extraction Results are Incomparable and What to do about it.2008

    • Author(s)
      Pyysalo, S., R.Saetre, J.Tsujii, T.Salakoski
    • Journal Title

      The Proceedings of the Third International Symposium on Semantic Mining in Biomedicine (SMBM 2008)

      Pages: 149-152

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Discriminative Candidate Generator for String Transformations.2008

    • Author(s)
      Okazaki, N., Y.Tsuruoka, S.Ananiadou, J.Tsujii
    • Journal Title

      The Proceedings of the 2008 Conference on Empirical Methods in Natural Language Processing (EMNLP 2008)

      Pages: 447-456

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Improving English-to-Chinese Translation for Technical Terms Using Morphological Information.2008

    • Author(s)
      Wu, X., N.Okazaki, T.Tsunakawa, J.Tsujii
    • Journal Title

      The Proceedings of the 8th Conference of the Association for Machine Translation in the Americas (AMTA 2008)

      Pages: 202-211

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Nested Region Algebra Extended with Variables for Tag-Annotated Text Search.2008

    • Author(s)
      Masuda, K., J.Tsujii
    • Journal Title

      the Proceedings of ACM 17th Conference on Information and Knowledge Management (CIKM 2008)

      Pages: 1349-1350

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] FACTA : a text search engine for finding associated biomedical concepts.2008

    • Author(s)
      Tsuruoka, Y., J.Tsujii, S.Ananiadou
    • Journal Title

      Bioinformatics 24(21)

      Pages: 2259-2260

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Corpus annotation for mining biomedical events from literature.2008

    • Author(s)
      Kim, J-D, T Ohta and J Tsujii
    • Journal Title

      BMC Bioinformatics 9(1)

      Pages: 10-10

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] New challenges for text mining : Mappign between text and manually curated pathways.2008

    • Author(s)
      Oda, K, J-D Kim, T Ohta, D Okanohara, T Matsuzaki, Y Tateisi and J Tsujii
    • Journal Title

      BMC Bioinformatics 9(Suppl 3)

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Feature Forest Models for Probabilistic HPSG Parsing.2008

    • Author(s)
      Miyao, Y and J Tsujii
    • Journal Title

      Computational Linguistics 34(1)

      Pages: 35-80

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Syntactic features for protein-protein interaction extraction.2008

    • Author(s)
      Saetre, R, K Sagae and J Tsujii
    • Journal Title

      Short Paper Proceedings of the 2nd International Symposium on Languages in Biology and Medicine (LBM 2007)

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] BI-018 Path Text : Text Mining Tools Integrated with Biological Pathway.2008

    • Author(s)
      Saetre, R. B Kemper, K Oda, N Okazaki, Y Matsuoka, N Kikuchi, H Kitano, Y Tsuruoka, S Ananiadou and J Tsujii
    • Journal Title

      Genomes to Systems Conference 2008 Handbook

      Pages: 65-65

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Task-Oriented Evaluation of Syntactic Parsers and Their Representations.2008

    • Author(s)
      Miyao Y, R Saetre, K Sagae, T Matsuzaki and J Tsujii
    • Journal Title

      Proceedings of ACl-08 : HLT

      Pages: 46-54

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Comparison of Knowledge Resource Designs : Supporting Term-level Text Annotation.2008

    • Author(s)
      Tribble A, J-D Kim, T Ohta and J Tsujii
    • Journal Title

      Proceedings of LREC-2008 Workshop : Building and evaluating resources for biotext mining.

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Building a Bilingual Lexicon Using Phrase-based Statistical Machine Translation via a Pivot Language.2008

    • Author(s)
      Tsunakawa, T, N Okazaki and J Tsujii
    • Journal Title

      Proceedings of The 22nd International Conference on Computational Linguistics Companion volume Posters and Demonstrations.

      Pages: 127-130

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Filling the Gaps Between Tools and Users : A Tool Comparator, Using Protein-Protein Interactions as an Example.2008

    • Author(s)
      Kano, Y, N Nguyen, R Saetre, K Yoshida, Y Miyao, Y Tsuruoka, Y Matsubayashi, S Ananiadou and J Tsujii
    • Journal Title

      Proceedings of The Pacific Symposium on Biocomputing (PSB)

      Pages: 616-627

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Exact Inference for Multi-label Classification using Sparse Graphical Models.2008

    • Author(s)
      Miyao, Y and J Tsujii
    • Journal Title

      Proceedings of the 22nd International Conference on Computational Linguistics Poser Session.

      Pages: 63-66

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Word Sense Disambiguation for All Words using Tree-Structured Conditional Random Fields.2008

    • Author(s)
      Hatori, J, Y Miyao and J Tsujii
    • Journal Title

      Proceedings of the 22nd International Conference on Computational Linguistics Poster Session.

      Pages: 43-46

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Towards Data And Goal Oriented Analysis : Tool Inter-Operability And Combinatorial Comparison.2008

    • Author(s)
      Kano, Y, N Nguyen, R Saetre, K Yoshida, K Fukamachi, Y Miyao, Y Tsuruoka, S Ananiadou and J Tsujii
    • Journal Title

      Proceedings of the 3rd International Joint Conference on Natural Language Processin. Hyderabad, India

      Pages: 859-864

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Bilingual Synonym Identification with Spelling Variations.2008

    • Author(s)
      Tsunakawa, T and J Tsujii
    • Journal Title

      Proceedins of the 3rd international Joint Conference on Natural Language Processing. Hyderabad, India

      Pages: 457-464

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] GENIA-GR : a Grammatical Relation Corpus for Parser Evaluation in the Biomedical Domain.2008

    • Author(s)
      Tateisi, Y, Y Miyao, K Sagae and J Tsujii
    • Journal Title

      Proceedins of the 5th International Conference on Language Resources and Evaluation.

      Pages: 496-496

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Building Bilingual Lexicons Using Lexical Translation Probabilities via Pivot Languages.2008

    • Author(s)
      Tsunekawa, T, N Okazaki and J Tsujii
    • Journal Title

      Proceedings of the 5th International Conference on Language Resources and Evaluation.

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] From Text to Pathway : Corpus Annotation for Knowledge Acquisition from Biomedical Literature.2008

    • Author(s)
      Kim, J-D, T Ohta, K Oda, and J Tsujii
    • Journal Title

      proceedings of the 6th Aisa Pcific Bioinformatics Conference. Series on Advances in Bioinformatics and Computational Biology6.

      Pages: 165-176

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Challenges in Pronoun Resolution System for Biomedical Text.2008

    • Author(s)
      Nagan, N, J-D Kim and J Tsujii
    • Journal Title

      proceedings of the 6th editoin of the Language Resources and Evaluation.

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Raising the Compatibility of Heterogeneous Annotations : A Case Study on Protein Mention Recognition.2008

    • Author(s)
      Wang, Y, K Yoshida, J-D Kim, R Saetre and J Tsujii
    • Journal Title

      Proceedings of the BioNLP workshop of the 46th Annual Meeting of the Association for Computational Linguistics (ACL 2008). BioNLP 2008. Current Trends in Biomedical Natural Language.

      Pages: 118-119

    • NAID

      110006793712

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Comparative Parser Performance Analysis across Grammar Frameworks through Automatic Tree Conversion using Synchronous Grammars.2008

    • Author(s)
      Matsuzaki, T and J Tsujii
    • Journal Title

      Proceedings of the 22nd International Conference on Computational Linguistics (COLING-2008)

      Pages: 545-552

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] SB-012 'PAYAO' : Web community tagging system to SBML models.2008

    • Author(s)
      Matsuoka, Y, N Kikuchi, R Saetre, B Kemper, N Okazaki, H Sugimura, A Hayama, S Ananiadou J Tsujii and H Kitano
    • Journal Title

      Genomes to Systems Conference 2008 Handbook

      Pages: 91-91

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Sharable type system design for tool inter-operability and combinatorial comparison.2008

    • Author(s)
      Kano, Y, N Nguyen, R Saetre, K Fukamachi, K Yoshida, Y Miyao, Y Tsuruoka, S Ananiadou and J Tsujii
    • Journal Title

      Proceedings of the First International Conferene on Global Interoperability for Language Resources (ICGL)

      Pages: 122-129

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Challenges in Mapping of Syntactic Representations for Framework-Independent Parser Evaluation.2008

    • Author(s)
      Sagae, K, Y Miyao, T Matsuzaki and J Tsujii
    • Journal Title

      Proceedings of the Workshop on Automated Syntactic Annotations for Interoperable Language Resources at the First International Conference on Global Interoperability for Language Resources (ICGL'08)

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Machine Learning-Based Pronoun Resolution for Biomedical Text.2008

    • Author(s)
      Nguyen, N, Miyao, J-D Kim and J Tsujii
    • Journal Title

      言語処理学会第14回年次大会発表論文集(NLP2008)

    • Related Report
      2007 Annual Research Report
  • [Journal Article] 複雑なグリッド環境で柔軟なプログラミングを実現するフレームワーク.2008

    • Author(s)
      弘中健, 斎藤秀雄, 高橋慧, 田浦健次朗
    • Journal Title

      情報処理学会論文誌 : コンピューティングシステム(ACS) 1(2)

      Pages: 157-168

    • NAID

      110007990181

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] gluepy : A Simple Distributed Python Framework for Complex Grid Environments.2008

    • Author(s)
      Hironaka, K. H Saito, K Takahashi and K Taura
    • Journal Title

      Proceedings of the 21st Annual International Works hop on Languages and Compilers for Parallel Gomputing (LCPC 2008)

      Pages: 249-263

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Learning string similarity measures for gene/protein name dictionary look-up using logistic regression.2007

    • Author(s)
      Tsuruoka, Y, J McNaught, J Tsujii and S Ananiadou
    • Journal Title

      Bioinformatics 23(20)

      Pages: 2768-2774

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Move Prediction in Go with the Maximum Entropy Method.2007

    • Author(s)
      Araki, N, K Yoshida, Y Tsuruoka and J Tsujii
    • Journal Title

      IEEE Symposium Series on Computational Intelligence

      Pages: 189-195

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Framework independent summarized parser output and its documentation.2007

    • Author(s)
      Tam, WL, Y Miyao and J Tsujii
    • Journal Title

      Proceeding of grammar engineering across framework 2007

      Pages: 319-331

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Towards Framework-Independent Evaluation of Deep Linguistic Parsers.2007

    • Author(s)
      Miyao, Y, K Sagae and J Tsujii
    • Journal Title

      Proceedings of Grammar Engineering across Frameworks 2007

      Pages: 238-258

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A log-linear model with an n-gram reference distribution for accurate HPSG parsing.2007

    • Author(s)
      Ninomiya, T, Takuya M, Y Miyao and J Tsujii
    • Journal Title

      Proceedings of IWPT 2007

      Pages: 60-68

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Evaluating Impact of Re-training a Lexical Disambiguation Model on Domain Adaptation of an HPSG Parser.2007

    • Author(s)
      Hara, T, Y Miyao and J Tsujii
    • Journal Title

      Proceedings of IWPT 2007

      Pages: 11-22

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] HPSG parsing with shallow dependency constraints.2007

    • Author(s)
      Sagae, K, Y Miyao and J Tsujii
    • Journal Title

      Proceedings of the 44th Meeting of the Association for Computational Linguistics

      Pages: 624-631

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A discriminative language model with pseudo-negative samples.2007

    • Author(s)
      Okanohara, D and J Tsujii
    • Journal Title

      Proceedings of the 45th Annual Meeting of the Association of Computational Linguistics

      Pages: 73-80

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] AKANE System : Protein-Protein Interaction Pairs in BioCreAtlvE2 Challenge, PPI-IPS subtask.2007

    • Author(s)
      Saetre, R, K Yoshida, A Yakushiji, Y Miyao, Y Matsubayashi and T Ohta
    • Journal Title

      Proceedings of the Second BioCreative Challenge Evaluation Workshop

      Pages: 209-212

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Reranking for Biomedical Named-Entity Recognition.2007

    • Author(s)
      Yoshida, K and J Tsujii
    • Journal Title

      Proceedings of the Workshop on BioNLP 2007

      Pages: 215-222

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 最小記述長原理に基づいた日本語話し言葉の単語分割.2007

    • Author(s)
      松原勇介, 秋葉友良, 辻井潤一
    • Journal Title

      言語処理学会第13回年次大会発表論文集.

    • Related Report
      2006 Annual Research Report
  • [Journal Article] 潜在的情報を利用した文識別モテル.2007

    • Author(s)
      岡野原, 大輔 辻井潤一
    • Journal Title

      言語処理学会第13回年次大会発表論文集.

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Efficient HPSG Parsing with Supertagging and CFG-filtering.2007

    • Author(s)
      Matsuzaki Takuya, Yusuke Miyao, Jun'ichi Tsujii.
    • Journal Title

      In the Proceedings of the Twentieth International Joint Conference on Artificial Intelligence.

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Locality-aware Connection Management and Rank Assignment for Wide-area MPI.2007

    • Author(s)
      Hideo Saito, Kenjiro Taura.
    • Journal Title

      The IEEE International Symposium on CCGrid 2007. Rio de Janeiro,Brazil. (To appear)

    • NAID

      110006534125

    • Related Report
      2006 Annual Research Report
  • [Journal Article] A Fast T Topology Inference --- A building block for network-aware parallel processing.2007

    • Author(s)
      Tatsuya Shiral, Hideo Saito, Kenjiro Taura
    • Journal Title

      The IEEE International Symposium on HPDC 2007. Monterey,USA. (To appear)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] 高速なトポロジー推定-ネツトワークを考慮した並列計算のための基盤として.2007

    • Author(s)
      白井逹也, 斎藤秀雄, 田浦健次朗
    • Journal Title

      Symposium on Advanced Computing Systems and Infrastructures 2007 (採録)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] 広域MPI用の局所性を考慮した接続管理とランク割り当て2007

    • Author(s)
      斎藤秀雄, 田浦健次朗
    • Journal Title

      Symposium on Advanced Computing Systems and Infrastructures2007 (採録)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] 動的にチャネルが増減する環境下での分散スナップショットアルゴリズム.2007

    • Author(s)
      澤井省吾, 田浦健次朗, 近山隆
    • Journal Title

      第63回ブログラミング研究会

    • NAID

      110006367010

    • Related Report
      2006 Annual Research Report
  • [Journal Article] 機械学習を用いた文脈自由規則の書き換えによる文圧縮.2006

    • Author(s)
      海野 裕也, 二宮 崇, 宮尾 祐介, 辻井 潤一
    • Journal Title

      言語処理学会第12回年次大会発表論文集

      Pages: 1091-1094

    • Related Report
      2006 Annual Research Report
  • [Journal Article] 頑健なHPSGパーザの出力のTDL意味表現への変換.2006

    • Author(s)
      佐藤学, 戸次大介, 宮尾祐介, 辻井潤一
    • Journal Title

      言語処理学会第12回年次大会発表論文集.

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Automatic Recognition of Topic-Classified Relations between Prostate Cancer and Genes from Medline Abstracts.2006

    • Author(s)
      Chun, Hong-woo, Yoshimasa Tsuruoka, Jin-Dong Kim, Rie Shiba, Naoki Nagata, Teruyoshi Hishiki, Jun'ichi Tsujii
    • Journal Title

      In the Proceedings of the second international symposium on semantic mining in Biomedicine. Jena, Germany

      Pages: 5-12

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Subdomain adaptation of a POS tagger with a small corpus.2006

    • Author(s)
      Tateisi, Yuka, Yoshimasa Tsuruoka, Jun'ichi Tsujii
    • Journal Title

      In the Proceedings of the HLT-NAACL BioNLP Workshop on Linking Natural Language and Biology. New York, USA

      Pages: 136-137

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Trimming CFG Parse Trees for sentence compression Using Machine Learning Approaches.2006

    • Author(s)
      Unno, Yuya, Takashi Ninomiya, Yusuke Miyao, Jun'ichi Tsujii.
    • Journal Title

      Proceedings of the COLING/ACL 2006 Main Conference Poster Sessions. Sydney, Australia

      Pages: 850-857

    • Related Report
      2006 Annual Research Report
  • [Journal Article] An Intelligent Search Engine and GUI-based Efficient MEDLINE Search Tool Based on Deep Syntactic Parsing.2006

    • Author(s)
      Ohta, Tomoko, Yusuke Miyao, Takashi Ninomiya, Yoshimasa Tsuruoka, Akane Yakushiji, Katsuya Masuda, Jumpei Takeuchi, Kazuhiro Yoshida, Tadayoshi Hara, Jin-Dong Kim, Yuka Tateisi, Jun'ichi Tsujii
    • Journal Title

      In the Proceedings of the COLING/ACL 2006 Interactive Presentation Sessions. Sydney, Australia

      Pages: 17-20

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Automatic Construction of Predicate-argument Structure Patterns for Biomedical Information Extraction.2006

    • Author(s)
      Yakushiji Akane, Miyao Yusuke, Ohta Tomoko, Tateisi, Yuka, Tsujii, Jun'ichi.
    • Journal Title

      In the Proceedings of the 2006 Conference on Empirical Methods in Natural Language Processing. Sydney, Australia

      Pages: 284-292

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Linguistic and Biological Annotations of Biological Interaction Events.2006

    • Author(s)
      Ohta, Tomoko, Yuka Tateisi, Jin-Dong Kim, Akane Yakushiji, Jun-ichi Tsujii.
    • Journal Title

      In the Proceedings of The Fifth International Conference on Language Resource and Evaluation (LREC 2006). Genoa, Italy

      Pages: 1405-1408

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Translating HPSG-style Outputs of a Robust Parser into Typed Dynamic Logic.2006

    • Author(s)
      Sato Manabu, Daisuke Bekki, Yusuke Miyao, Jun'ichi Tsujii.
    • Journal Title

      In the Proceedings of COLING-ACL 2006 Poster Session. Sydney, Australia

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Semantic Retrieval for the Accurate Identification of Relational Concepts in Massive Textbases.2006

    • Author(s)
      Miyao, Yusuke, Tomoko Ohta, Katsuya Masuda, Yoshimasa Tsuruoka, Kazuhiro Yoshida, Takashi Ninomiya, Jun'ichi Tsujii
    • Journal Title

      In the Proceedings of COLING-ACL 2006. Sydney, Australia

      Pages: 1017-1024

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Improving the Scalability of Semi-Markov Conditional Random Fields for Named Entity Recognition.2006

    • Author(s)
      Daisuke Okanohara, Yusuke Miyao, Yoshimasa Tsuruoka, Jun'ichi Tsujii.
    • Journal Title

      In the Proceedings of ACL 2006. Sydney, Australia

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Extremely Lexicalized Models for Accurate and Fast HPSG Parsing.2006

    • Author(s)
      Ninomiya, Takashi, Takuya Matsuzaki, Yoshimasa Tsuruoka, Yusuke Miyao, Jun'ichi Tsujii
    • Journal Title

      In the Proc. of EMNLP 2006. Sydney, Australia

      Pages: 155-163

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Extraction of Gene-Disease Relations from MedLine using Domain Dictionaries and Machine Learning.2006

    • Author(s)
      Chun, Hong-woo, Yoshimasa Tsuruoka, Jin-Dong Kim, Rie Shiba, Naoki Nagata, Teruyoshi Hishiki, Jun'ichi Tsujii.
    • Journal Title

      The Pacific Symposium on Biocomputing (PSB) Maui, Hawaii, USA

      Pages: 4-15

    • Related Report
      2006 Annual Research Report
  • [Journal Article] 囲碁におる正確な看手予測のためのファジーパターンマツチング2006

    • Author(s)
      荒木伸夫, 吉田和弘, 鶴岡慶雅, 辻井潤一
    • Journal Title

      人工知能学会全国大会(第20回)論文集

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Text Mining and its potential applications in systems biology.2006

    • Author(s)
      Ananiadou, Sophia, Douglous Kell, Junichi Tsujii.
    • Journal Title

      Trends in Biotechmology.

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Fast and Scalable HPSG Parsing.2006

    • Author(s)
      Ninomiya, Takashi, Yoshimasa Tsuruoka, Yusuke Miyao, Kenjiro Taura, Jun'ichi Tsujii
    • Journal Title

      Traitement automatique des langues (TAL).

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Automatic Recognition of Topic-Classified Relations between Prostate Cancer and Genes using MEDLINE Abstracts.2006

    • Author(s)
      Chun, Hong-woo, Yoshimasa Tsuruoka, Jin-Dong Kim, Rie Shiba, Naoki Nagata, Teruyoshi Hishiki, Jun'ichi Tsujii.
    • Journal Title

      BMC-Bioinformatics. 7

    • Related Report
      2006 Annual Research Report
  • [Journal Article] MPI/GXP : 広域環境用の適応的なメッセージパッシングシステム.2006

    • Author(s)
      斎藤秀雄, 田浦健次朗, 近山隆
    • Journal Title

      並列/分散/協調処理に関するサマーワークショッブ(SWoPP2006),高知

      Pages: 25-30

    • NAID

      110004821204

    • Related Report
      2006 Annual Research Report
  • [Journal Article] 低負荷で多数の計算機をリアルタイムに監視するシステムVGXPの実装2006

    • Author(s)
      鴨志田良和, 金田憲二, 遠藤敏夫, 田浦健次朗, 近山隆
    • Journal Title

      並列/分散/協調処理に関する『高知』サマー・ワークショッブ,信学技報 Vol.106, No.199

      Pages: 19-24

    • NAID

      110004823473

    • Related Report
      2006 Annual Research Report
  • [Journal Article] A Low-Stretch Object Migration Scheme for Wide-Area Environments.2006

    • Author(s)
      Ken Hironaka, Kenjiro Taura, Takashi Chikayama.
    • Journal Title

      第63回ブログラミング研究会

    • NAID

      130000058244

    • Related Report
      2006 Annual Research Report
  • [Presentation] Computational Linguistics and Natural Language Processing2011

    • Author(s)
      Tsujii J
    • Organizer
      the 12th International Conference on Computational Linguistics and Intelligent Text Processing (CICLing 2011), Key Note
    • Place of Presentation
      早稲田大学、東京都
    • Related Report
      2010 Annual Research Report
  • [Presentation] 表現から意味へ:言語処理技術と言語の科学2011

    • Author(s)
      辻井潤一
    • Organizer
      言語処理学会第17回年次大会
    • Place of Presentation
      愛知県豊橋市 豊橋技術科学大学(特別講演)
    • Related Report
      2010 Annual Research Report
  • [Presentation] 日本語言語資源の統合的相互運用2011

    • Author(s)
      狩野芳伸, 橋田浩一
    • Organizer
      言語処理学会第17回年次大会
    • Place of Presentation
      愛知県豊橋市 豊橋技術科学大学
    • Related Report
      2010 Annual Research Report
  • [Presentation] ツリーバンキングのための文法枠組みに関する考察2011

    • Author(s)
      王向莉, 松崎拓也, 宮尾祐介, Kun Yu, 李元, 辻井潤一
    • Organizer
      言語処理学会第17回年次大会
    • Place of Presentation
      愛知県豊橋市 豊橋技術科学大学
    • Related Report
      2010 Annual Research Report
  • [Presentation] A Term Translation System Using Hierarchical Phrases and Morphemes.2011

    • Author(s)
      Wu XC, Tshjii J
    • Organizer
      言語処理学会第17回年次大会
    • Place of Presentation
      愛知県豊橋市 豊橋技術科学大学
    • Related Report
      2010 Annual Research Report
  • [Presentation] Token Boundaries or Named Entity Boundaries.2011

    • Author(s)
      Cho H-C, Okazaki N, Tsujii J
    • Organizer
      言語処理学会第17回年次大会
    • Place of Presentation
      愛知県豊橋市 豊橋技術科学大学
    • Related Report
      2010 Annual Research Report
  • [Presentation] 日本語格解析において問題となり得る諸現象の定量的分析2011

    • Author(s)
      花岡洋輝, 松崎拓也, 宮尾祐介, 辻井潤一
    • Organizer
      言語処理学会第17回年次大会
    • Place of Presentation
      愛知県豊橋市 豊橋技術科学大学
    • Related Report
      2010 Annual Research Report
  • [Presentation] Getting the Deep Parse of Chinese.2011

    • Author(s)
      Yu K, Miyao Y, Matsuzaki T, Wang XLi, Tsujii J
    • Organizer
      言語処理学会第17回年次大会
    • Place of Presentation
      愛知県豊橋市 豊橋技術科学大学
    • Related Report
      2010 Annual Research Report
  • [Presentation] 自動構築した大規模訓練データを用いた固有名抽出2011

    • Author(s)
      宇佐美佑, Cho H-C, 岡崎直観, 辻井潤一
    • Organizer
      言語処理学会第17回年次大会
    • Place of Presentation
      愛知県豊橋市 豊橋技術科学大学
    • Related Report
      2010 Annual Research Report
  • [Presentation] Design and Implementation of GXP make-a Workflow System Based on Make.2010

    • Author(s)
      Taura, Kenjiro, Takuya Matsuzaki, Makoto Miwa, Yoshikazu Kamoshida, Daisaku Yokoyama, Nan Dun, Takeshi Shibata, Choi Sung Jun, Jun'ichi Tsujii.
    • Organizer
      2010 IEEE 6th International Conference on e-Science 214-221
    • Related Report
      2010 Final Research Report
  • [Presentation] Evaluating Dependency Representation for Event Extraction.2010

    • Author(s)
      Miwa, Makoto, Sampo Pyysalo, Tadayoshi Hara, Jun'ichi Tsujii.
    • Organizer
      23rd COLING. pp.779-787
    • Related Report
      2010 Final Research Report
  • [Presentation] Entity-Focused Sentence Simplification for Relation Extraction.2010

    • Author(s)
      Miwa, Makoto, Yusuke Miyao, Rune Satre, Jun'ichi Tsujii.
    • Organizer
      23rd COLING. pp.788-796
    • Related Report
      2010 Final Research Report
  • [Presentation] A Simple Approach for HPSG Supertagging Using Dependency Information.2010

    • Author(s)
      Yao-zhong Zhang, Takuya Matsuzaki, Jun'ichi Tsujii.
    • Organizer
      11th NAACL-HLT'10. pp.645-648
    • Related Report
      2010 Final Research Report
  • [Presentation] Fine-Grained Tree-to-String Translation Rule Extraction.2010

    • Author(s)
      Wu, Xianchao, Takuya Matsuzaki, Jun'ichi Tsujii.
    • Organizer
      48th ACL. pp.325-334
    • Related Report
      2010 Final Research Report
  • [Presentation] ParaTrac : A Fine-Grained Profiler for Data-Intensive Workflows.2010

    • Author(s)
      Dun, Nan, Kenjiro Taura, Akinori Yonezawa.
    • Organizer
      19th ACM HPDC 2010, pp.37-48
    • Related Report
      2010 Final Research Report
  • [Presentation] File-Access Patterns of Data-Intensive Workflow Applications and their Implications to Distributed Filesystems.2010

    • Author(s)
      Shibata, Takeshi, SungJun Choi, Kenjiro Taura.
    • Organizer
      3rd DIDC 2010, pp.746-755
    • Related Report
      2010 Final Research Report
  • [Presentation] A Japanese Particle Corpus Built by Example-Based Annotation.2010

    • Author(s)
      Hanaoka, Hiroki, Hideki Mima, Jun'ichi Tsujii.
    • Organizer
      LREC2010. pp.1876-1880
    • Related Report
      2010 Final Research Report
  • [Presentation] Forest-guided Supertagger Training.2010

    • Author(s)
      Yao-zhong Zhang, Takuya Matsuzaki, Jun'ichi Tsujii.
    • Organizer
      23rd COLING. pp.1281-1289
    • Related Report
      2010 Final Research Report
  • [Presentation] The Perspectives of BioNLP Shared Tasks and GENIA2010

    • Author(s)
      Tsujii J
    • Organizer
      BioCreative III Workshop, Key Note
    • Place of Presentation
      Double Tree Hotel, Bethesda, Maryland, USA
    • Related Report
      2010 Annual Research Report
  • [Presentation] Deep Syntactic Structures for String-to-Tree Translation.2010

    • Author(s)
      Wu, Xianchao, Jun'ichi Tsujii
    • Organizer
      言語処理学会第16回年次大会
    • Place of Presentation
      東京都東京大学
    • Related Report
      2009 Annual Research Report
  • [Presentation] 構文解析の分野適応における精度低下要因の分析及び分野間距離の測定手法2010

    • Author(s)
      張本佳子, 宮尾祐介, 辻井潤一
    • Organizer
      言語処理学会第16回年次大会
    • Place of Presentation
      東京都東京大学
    • Related Report
      2009 Annual Research Report
  • [Presentation] 行列分解による多クラス分類とその応用2010

    • Author(s)
      岡野原大輔, 辻井潤一
    • Organizer
      言語処理学会第16回年次大会
    • Place of Presentation
      東京都東京大学
    • Related Report
      2009 Annual Research Report
  • [Presentation] 大語彙の同義語集合からの文脈に応じた語彙選択2010

    • Author(s)
      松原勇介, 辻井潤一
    • Organizer
      言語処理学会第16回年次大会
    • Place of Presentation
      東京都東京大学
    • Related Report
      2009 Annual Research Report
  • [Presentation] A Constrained Semantics for Parsed English Sentences.2010

    • Author(s)
      Butler A, Miyao Y, Yoshimoto K, Tsujii J
    • Organizer
      言語処理学会第16回年次大会
    • Place of Presentation
      東京都東京大学
    • Related Report
      2009 Annual Research Report
  • [Presentation] 言語理解と知識-情報空間の構造化に向けて-2010

    • Author(s)
      辻井潤一
    • Organizer
      第24回人工知能学会全国大会
    • Place of Presentation
      長崎市長崎ブリックホール(基調講演)
    • Related Report
      2009 Annual Research Report
  • [Presentation] Bilingual Dictionary Extraction from Wikipedia.2009

    • Author(s)
      Yu, Kun, Junichi Tsujii.
    • Organizer
      Proceedings of Machine Translation Summit XII.
    • Related Report
      2010 Final Research Report
  • [Presentation] Extracting Bilingual Dictionary from Comparable Corpora with Dependency Heterogeneity.2009

    • Author(s)
      Yu, Kun, Junichi Tsujii.
    • Organizer
      NAACL HLT 2009. pp.121-124
    • Related Report
      2010 Final Research Report
  • [Presentation] Event Extraction with Complex Event Classification using Rich Features.2009

    • Author(s)
      Miwa, Makoto, Rune Saetre, Jin-Dong Kim, Jun'ichi Tsujii.
    • Organizer
      In the 3rd International Symposium on Languages in Biology and Medicine (LBM 2009). pp.11-19
    • Place of Presentation
      Honorable Mention Award
    • Related Report
      2010 Final Research Report
  • [Presentation] A Comparative Study on Generalization of Semantic Roles in FrameNet.2009

    • Author(s)
      Matsubayashi, Yuichiroh, Naoaki Okazaki, Jun'ichi Tsujii.
    • Organizer
      ACL-IJCNLP2009. pp.19-27
    • Related Report
      2010 Final Research Report
  • [Presentation] The UOT System : Improve String-to-Tree Translation Using Head-Driven Phrase Structure Grammar and Predicate-Argument Structures.2009

    • Author(s)
      Wu, Xianchao, Takuya Matsuzaki, Naoaki Okazaki, Yusuke Miyao, Jun'ichi Tsujii.
    • Organizer
      IWSLT 2009. pp.99-106
    • Related Report
      2010 Final Research Report
  • [Presentation] A Discriminative Latent Variable Chinese Segmenter with Hybrid Word/Character Information.2009

    • Author(s)
      Sun, Xu, Yaozhong Zhang, Takuya Matsuzaki, Yoshimasa Tsuruoka, Jun'ichi Tsujii.
    • Organizer
      NAACL-HLT'09. Boulder, Colorado, pp.56-64
    • Related Report
      2010 Final Research Report
  • [Presentation] HPSG Supertagging : A Sequence Labeling View.2009

    • Author(s)
      Yao-zhong Zhang, Takuya Matsuzaki, Jun'ichi Tsujii.
    • Organizer
      11th IWPT'09. pp.210-213
    • Related Report
      2010 Final Research Report
  • [Presentation] Robust Approach to Abbreviating Terms : A Discriminative Latent Variable Model with Global Information.2009

    • Author(s)
      Sun, Xu, Naoaki Okazaki, Jun'ichi Tsujii.
    • Organizer
      ACL. Singapore, pp.905-913
    • Related Report
      2010 Final Research Report
  • [Presentation] Fast Full Parsing by Linear-Chain Conditional Random2009

    • Author(s)
      Tsuruoka, Yoshimasa, Jun'ichi Tsujii, Sophia Ananiadou.
    • Organizer
      EACL. pp.790-798
    • Related Report
      2010 Final Research Report
  • [Presentation] Supervised Learning of a Probabilistic Lexicon of Verb Semantic Classes.2009

    • Author(s)
      Miyao, Yusuke, Jun'ichi Tsujii.
    • Organizer
      EMNLP 2009. Singapore, pp.1328-1337
    • Related Report
      2010 Final Research Report
  • [Presentation] Semi-Supervised Lexicon Mining from Parenthetical Expressions in Monolingual Web Pages.2009

    • Author(s)
      Wu, Xianchao, Okazaki, Naoaki, Tsujii, Jun'ichi.
    • Organizer
      Human Language Technologies : NAACL. Boulder, Colorado, pp.424-432
    • Related Report
      2010 Final Research Report
  • [Presentation] Latent Variable Perceptron Algorithm for Structured Classification.2009

    • Author(s)
      Sun, Xu, Takuya Matsuzaki, Daisuke Okanohara, Jun'ichi Tsujii.
    • Organizer
      IJCAI. Los Angeles, pp.1236-1242
    • Related Report
      2010 Final Research Report
  • [Presentation] Effective Analysis of Causes and Inter-dependencies of Parsing Errors.2009

    • Author(s)
      Hara, Tadayoshi, Yusuke Miyao, Jun'ichi Tsujii.
    • Organizer
      IWPT-09 Paris, France, pp.180-191
    • Related Report
      2010 Final Research Report
  • [Presentation] Evaluating Contribution of Deep Syntactic Information to Shallow Semantic Analysis.2009

    • Author(s)
      Uematsu, Sumire, Jun'ichi Tsujii.
    • Organizer
      IWPT'09. pp.85-88
    • Related Report
      2010 Final Research Report
  • [Presentation] Sequential Labeling with Latent Variables : An Exact Inference Algorithm and An Efficient Approximation.2009

    • Author(s)
      Sun, Xu, Jun'ichi Tsujii.
    • Organizer
      12th EACL 2009. Athens, Greece, pp.772-780
    • Related Report
      2010 Final Research Report
  • [Presentation] Bilingual Dictionary Extraction from Wikipedia.2009

    • Author(s)
      Yu K, Tsujii J
    • Organizer
      Proceedings of Machine Translation Summit XII
    • Place of Presentation
      シャトーロリエ、オタワ(カナダ)
    • Related Report
      2009 Annual Research Report
  • [Presentation] Improving Long-length Dependency Parsing by Parser Ensemble2009

    • Author(s)
      Yu, Kun and Jun'ichi Tsujii
    • Organizer
      言語処理学会第15回年次大会
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] Self-Training for Mining Parenthetical Translations in Monolingual Web Pages2009

    • Author(s)
      Wu, Xianchao, Naoaki Okazaki and Jun'ichi Tsujii
    • Organizer
      JaNLP (言語処理大会)
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] Sequential Labeling with Latent Variables: An Exact Inference Algorithm and An Efficient Approximation2009

    • Author(s)
      Sun, Xu and Jun'ichi Tsujii
    • Organizer
      Proceedings of the 12th Conference of the European Chapter of the Association for Computational Linguistics(EACL 2009), pp. 772-780
    • Place of Presentation
      Athens, Greece
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] 階層木言語モデルの音声認識への適用2009

    • Author(s)
      岡野原大輔, 辻井潤一
    • Organizer
      日本音響学会2009年春季研究発表会
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] The Design of Chinese HPSG for Data-Oriented Parsing2009

    • Author(s)
      Wang, Xiangli, Shunya Iwasawa, Yusuke Miyao, Takuya Matsuzaki and Jun'ichi Tsujii
    • Organizer
      言語処理学会第15回年次大会
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] 自動意味役割付与のための役割集合の設計2009

    • Author(s)
      松林優一郎, 辻井 潤一.
    • Organizer
      言語処理学会第15回年次大会発表論文集. pp.364-367
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] 日中漢字の対応関係の自動獲得と中日語彙翻訳2009

    • Author(s)
      綱川隆司, 劉 瀟, 岡崎 直観, 辻井 潤一
    • Organizer
      言語処理学会第15回年次大会発表論文集. pp. 857-860
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] 語義曖昧性解消における統語的依存関係の寄与について2009

    • Author(s)
      羽鳥潤, 宮尾 祐介, 辻井 潤一
    • Organizer
      言語処理学会第15回年次大会発表論文集(NLP2009). pp. 658-661
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] 蛋白質相互作用抽出への転移学習の応用2009

    • Author(s)
      三輪誠, 辻井 潤一
    • Organizer
      言語処理学会第15回年次大会発表論文集(NLP2009)
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] GuideLink : ガイドラインの管理を同時に行う アノテーションツール2009

    • Author(s)
      大内田賢太, 金進東, 辻井潤一
    • Organizer
      言語処理学会第15回年次大会発表論文集(NLP2009)
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] ロジスティク回帰モデルを用いたラベル付文書クラスタリング2009

    • Author(s)
      岡野原大輔, 辻井潤一
    • Organizer
      言語処理学会第15回年次大会発表論文集(NLP2009)
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] Self-Training for Mining Parenthetical Translations in Monolingual Web Pages.2009

    • Author(s)
      Wu, X., N.Okazaki, J.Tsujii
    • Organizer
      言語処理学会第15回年次大会
    • Place of Presentation
      鳥取県鳥取市
    • Related Report
      2008 Annual Research Report
  • [Presentation] The Design of Chinese HPSG for Data-Oriented Parsing.2009

    • Author(s)
      Wang, X., S.Iwasawa, Y.Miyao, T.Matsuzaki, J.Tsujii
    • Organizer
      言語処理学会第15回年次大会
    • Place of Presentation
      鳥取県鳥取市
    • Related Report
      2008 Annual Research Report
  • [Presentation] 自動意味役割付与のための役割集合の設計2009

    • Author(s)
      松林優一郎, 辻井潤一
    • Organizer
      言語処理学会第15回年次大会
    • Place of Presentation
      鳥取県鳥取市
    • Related Report
      2008 Annual Research Report
  • [Presentation] 日中漢字の対応関係の自動獲得と中日語彙翻訳2009

    • Author(s)
      綱川隆司, 劉瀟, 岡崎直観, 辻井潤一
    • Organizer
      言語処理学会第15回年次大会
    • Place of Presentation
      鳥取県鳥取市
    • Related Report
      2008 Annual Research Report
  • [Presentation] 語義曖昧性解消における統語的依存関係の寄与について2009

    • Author(s)
      羽鳥潤, 宮尾祐介, 辻井潤一
    • Organizer
      言語処理学会第15回年次大会
    • Place of Presentation
      鳥取県鳥取市
    • Related Report
      2008 Annual Research Report
  • [Presentation] 蛋白質相互作用抽出への転移学習の応用2009

    • Author(s)
      三輪誠, 辻井潤一
    • Organizer
      言語処理学会第15回年次大会
    • Place of Presentation
      鳥取県鳥取市
    • Related Report
      2008 Annual Research Report
  • [Presentation] GuideLink:ガイドラインの管理を同時に行うアノテーションツール2009

    • Author(s)
      大内田賢太, 金進東, 辻井潤一
    • Organizer
      言語処理学会第15回年次大会
    • Place of Presentation
      鳥取県鳥取市
    • Related Report
      2008 Annual Research Report
  • [Presentation] ロジスティク回帰モデルを用いたラベル付文書クラスタリング2009

    • Author(s)
      岡野原大輔, 辻井潤一
    • Organizer
      言語処理学会第15回年次大会
    • Place of Presentation
      鳥取県鳥取市
    • Related Report
      2008 Annual Research Report
  • [Presentation] 階層木言語モデルの音声認識への適用2009

    • Author(s)
      岡野原大輔, 松原勇介, 辻井潤一
    • Organizer
      日本音響学会2009年春季研究発表会
    • Place of Presentation
      東京都目黒区
    • Related Report
      2008 Annual Research Report
  • [Presentation] トポロジ情報を用いた効率的かつ漸近安定な大容量ブロードキャスト2009

    • Author(s)
      柴田剛志, 田浦健次郎
    • Organizer
      第7回先進的計算基盤システムシンポジウム7th Symposium on Advanced Computing Systems and infrastructures (SACSIS 2009)
    • Place of Presentation
      広島県広島市
    • Related Report
      2008 Annual Research Report
  • [Presentation] メッセージ衝突を防止する適応的な集合通信アルゴリズム2009

    • Author(s)
      吉富翔太, 弘中健, 田浦健次朗
    • Organizer
      先進的計算基盤システムシンポジウム(SACSIS2009)
    • Place of Presentation
      広島県広島市
    • Related Report
      2008 Annual Research Report
  • [Presentation] Gmount : An Ad Hoc and Locality-Aware Distributed File System by Using SSH and FUSE. Proceedings of the 2009 9th IEEE/ACM International Symposium on Cluster Computing and the Grid table of contents.2009

    • Author(s)
      Dun N., K.Taura, A.Yonezawa
    • Organizer
      2009 9th IEEE/ACM International Symposium on Cluster Computing and the Grid
    • Place of Presentation
      Shanghai, China
    • Related Report
      2008 Annual Research Report
  • [Presentation] High Performance Wide-area Overlay using Deadlock-free Routing.2009

    • Author(s)
      Hironaka, K., H.Saito, K.Taura
    • Organizer
      2009 International ACM Symposium on High Performance Distributed Computing (HPDC2009)
    • Place of Presentation
      Garching, Germany
    • Related Report
      2008 Annual Research Report
  • [Presentation] 全ての部分文字列を考慮した文書分類2008

    • Author(s)
      岡野原大輔, 辻井潤一
    • Organizer
      情報処理学会 第187回自然言語処理研究会
    • Place of Presentation
      静岡県熱海市
    • Year and Date
      2008-09-25
    • Related Report
      2008 Annual Research Report
  • [Presentation] 広域TCPオーバレイにおけるデッドロックフールーティング.2008

    • Author(s)
      弘中健, 斎藤秀雄, 田浦健次朗
    • Organizer
      情報処理学会研究報告OS-109(SWoPP2008)
    • Place of Presentation
      佐賀市
    • Year and Date
      2008-08-05
    • Related Report
      2007 Annual Research Report
  • [Presentation] 階層木Logistic回帰モデルによる多クラス分類2008

    • Author(s)
      岡野原大輔, 辻井潤一
    • Organizer
      IBIS
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] Nested Region Algebra Extended with Variables for Tag-Annotated Text Search2008

    • Author(s)
      Masuda, Katsuya and Jun'ichi Tsujii
    • Organizer
      Proceedings of CIKM 2008 Poster Sessions. pp. 1349-1350
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] Filling the Gaps Between Tools and Users: A Tool Comparator, Using Protein-Protein Interactions as an Example2008

    • Author(s)
      Kano, Yoshinobu, Ngan Nguyen, Rune Saetre, Kazuhiro Yoshida, Yusuke Miyao, Yoshimasa Tsuruoka, Yuichiro Matsubayashi, Sophia Ananiadou and Jun'ichi Tsujii
    • Organizer
      In the Proceedings of The Pacific Symposium on Biocomputing(PSB). (13), pp. 616-627
    • Place of Presentation
      Hawaii, USA
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] A Discriminative Candidate Generator for String Transformations2008

    • Author(s)
      Okazaki, Naoaki, Yoshimasa Tsuruoka, Sophia Ananiadou and Jun'ichi Tsujii
    • Organizer
      Proceedings of the 2008 Conference on Empirical Methods in Natural Language Processing(EMNLP 2008), pp. 447-456
    • Place of Presentation
      Hawai, USA
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] From Text to Pathway: Corpus Annotation for Knowledge Acquisition from Biomedical Literature2008

    • Author(s)
      Kim, Jin-Dong, Ohta, Tomoko, Oda, Kanae and Tsujii, Jun'ichi Tsujii
    • Organizer
      Proceedings of the 6th Asia Pacific Bioinformatics Conference. Series on Advances in Bioinformatics and Computational Biology6. pp. 165-176(Corpus Annotation for Knowledge Acquisition from Biomedical Literature. In Alvis Brazma, Satoru Miyano, Tatsuya Akutsu(Eds.), Imperial College Press, ISSN 1751-6404)
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] Improving English-to-Chinese Translation for Technical Terms Using Morphological Information2008

    • Author(s)
      Wu, Xianchao, Naoaki Okazaki, Takashi Tsunakawa and Jun'ichi Tsujii
    • Organizer
      Proceedings of the 8th Conference of the Association for Machine Translation in the Americas(AMTA 2008). pp. 202-211
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] Combining Multiple Layers of Syntactic Information for Protein-Protein Interaction Extraction2008

    • Author(s)
      Miwa, Makoto, Rune Satre, Yusuke Miyao, Tomoko Ohta and Jun'ichi Tsujii
    • Organizer
      Proceedings of the Third International Symposium on Semantic Mining in Biomedicine(SMBM 2008), pp. 101-108
    • Place of Presentation
      Turku, Finland
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] Exploring the Compatibility of Heterogeneous Protein Annotations Toward Corpus Integration2008

    • Author(s)
      Wang, Yue, Jin-Dong Kim, Rune Saetre and Jun'ichi Tsujii
    • Organizer
      In the Proceedings of the Third International Symposium on Semantic Mining in Biomedicine(SMBM 2008)
    • Place of Presentation
      Turku, Finland
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] Why Biomedical Relation Extraction Results are Incomparable and What to do about it. In Tapio Salakoski2008

    • Author(s)
      Pyysalo, Sampo, Rune Saetre, Jun'ichi Tsujii and Tapio Salakoski
    • Organizer
      Proceedings of the Third International Symposium on Semantic Mining in Biomedicine. pp. 149-152(SMBM 2008)(Dietrich Rebholz-Schuhmann and Sampo Pyysalo(Eds.))
    • Place of Presentation
      Turku, Finland, Turku Centre for Computer Science(TUCS)
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] Challenges in Mapping of Syntactic Representations for Framework-Independent Parser Evaluation2008

    • Author(s)
      Sagae, Kenji, Yusuke Miyao, Takuya Matsuzaki, and Jun'ichi Tsujii
    • Organizer
      Proceedings of the Workshop on Automated Syntatic Annotations for Interoperable Language Resources at the First International Conference on Global Interoperability for Language Resources(ICGL'08)
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] 全ての部分文字列を考慮した文書分類2008

    • Author(s)
      岡野原大輔, 辻井 潤一
    • Organizer
      情報処理学会研究会報告. NL(187)
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] アラインメントに基づいた日中漢字の対応関係における解析2008

    • Author(s)
      劉 瀟, 綱川 隆司, 岡崎 直観, 辻井潤一
    • Organizer
      第188回自然言語処理研究発表会
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] 大規模コーパスを扱うためのツール群2008

    • Author(s)
      岡野原大輔, 辻井 潤一
    • Organizer
      第3回言語処理若手の会
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] 大規模コーパスを扱うためのツール群2008

    • Author(s)
      岡野原大輔, 辻井潤一
    • Organizer
      言語処理学会若手の会 第3回シンポジウム
    • Place of Presentation
      静岡県熱海市
    • Related Report
      2008 Annual Research Report
  • [Presentation] ポロジ情報を用いた効率的かつ漸近安定な大容量ブロードキャスト

    • Author(s)
      柴田 剛志, 田浦 健次朗
    • Organizer
      SACSIS 2009
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] GMount: An Ad Hoc and Locality-Aware Distributed File System by Using SSH and FUSE

    • Author(s)
      Nan Dun, Kenjiro Taura, and Akinori Yonezawa
    • Organizer
      CCGrid 2009
    • Related Report
      2008 Self-evaluation Report
  • [Book] Evaluating the Impact of Re-training a Lexical Disambiguation Model on Domain Adaptation of an HPSG Parser.(Trends in Parsing Technology : Dependency Parsing, Domain Adaptation, and Deep Parsing. Text, Speech and Language Technologypp.)(Harry Bunt, Paola Merlo, Joakim Nivre (Eds.))2010

    • Author(s)
      Hara, Tadayoshi, Yusuke Miyao, Jun'ichi Tsujii.
    • Publisher
      Springer
    • Related Report
      2010 Final Research Report
  • [Book] Probabilistic Context-Free Grammars with Latent Annotations.(Supertagging-Using Complex Lexical Descriptions in Natural Language Processing.)(Srinivas Bangalore, Aravind K.Joshi (Eds.))2010

    • Author(s)
      Matsuzaki, Takuya, Yusuke Miyao, Jun'ichi Tsujii.
    • Publisher
      MIT Press
    • Related Report
      2010 Final Research Report
  • [Book] Probabilistic Context-Free Grammars with Latent Annotations. In Srinivas Bangalore and Aravind K.Joshi (Eds.), "Supertagging-Using Complex Lexical Descriptions in Natural Language Processing."2010

    • Author(s)
      Matsuzaki, Takuya, Yusuke Miyao, Jun'ichi Tsujii.
    • Publisher
      MIT Press
    • Related Report
      2010 Annual Research Report
  • [Book] Evaluating the Impact of Re-training a Lexical Disambiguation Model on Domain Adaptation of an HPSG Parser. In Harry Bunt, Paola Merlo, Joakim Nivre (Eds.), "Trends in Parsing Technology : Dependency Parsing, Domain Adaptation, and Deep Parsing. Text, Speech and Language Technology."2009

    • Author(s)
      Hara T, Miyao Y, Tsujii J
    • Publisher
      Springer
    • Related Report
      2009 Annual Research Report
  • [Book] London SW1V 1AH UK(Corpora and their Annotation.)(Text Mining for Biology and Biomedicine. 46 Gillingham Street)(Sophia Ananiadou, John McNaught, (Eds.))2006

    • Author(s)
      Kim, Jin-Dong, Jun'ichi Tsujii.
    • Publisher
      Artech House
    • Related Report
      2010 Final Research Report
  • [Book] Corpora and their Annotation.2006

    • Author(s)
      Kim, Jin-Dong, Jun'icni Tsujii.
    • Publisher
      Text Mining for Biology and Biomedicine.
    • Related Report
      2006 Annual Research Report
  • [Remarks] プロジェクト

    • URL

      http://www-tsujii.is.s.u-tokyo.ac.jp/aNT/

    • Related Report
      2010 Final Research Report
  • [Remarks] 研究成果を反映したサービスを行う英国マンチェスター大学、国立テキストマイニングセンター

    • URL

      http://www.nactem.ac.uk/pathtext/

    • Related Report
      2010 Final Research Report
  • [Remarks]

    • URL

      http://www-tsujii.is.s.u-tokyo.ac.jp/index-j.html

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www-tsujii.is.s.u-tokyo.ac.jp/index-j.html

    • Related Report
      2009 Annual Research Report
  • [Remarks]

    • URL

      http://www-tsujii.is.s.u-tokyo.ac.jp/index-j.html

    • Related Report
      2008 Annual Research Report
  • [Remarks]

    • URL

      http://www-tsujii.is.s.u-tokyo.ac.jp/indes-j.html

    • Related Report
      2007 Annual Research Report
  • [Patent(Industrial Property Rights)] テータ変換装置および方法、データベース管理装置および方法、ならびにデータベース検索システ厶および方法2006

    • Inventor(s)
      増田勝也, 辻井潤一
    • Industrial Property Rights Holder
      増田勝也
    • Filing Date
      2006-07-14
    • Related Report
      2006 Annual Research Report

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Published: 2006-04-01   Modified: 2018-03-28  

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