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Creation of time-resolved thermodynamics and application to elucidation of protein reaction mechanism

Research Project

Project/Area Number 18205002
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Physical chemistry
Research InstitutionKyoto University

Principal Investigator

TERAZIMA Masahide  Kyoto University, 大学院・理学研究科, 教授 (00188674)

Project Period (FY) 2006 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥49,140,000 (Direct Cost: ¥37,800,000、Indirect Cost: ¥11,340,000)
Fiscal Year 2009: ¥9,360,000 (Direct Cost: ¥7,200,000、Indirect Cost: ¥2,160,000)
Fiscal Year 2008: ¥13,260,000 (Direct Cost: ¥10,200,000、Indirect Cost: ¥3,060,000)
Fiscal Year 2007: ¥12,090,000 (Direct Cost: ¥9,300,000、Indirect Cost: ¥2,790,000)
Fiscal Year 2006: ¥14,430,000 (Direct Cost: ¥11,100,000、Indirect Cost: ¥3,330,000)
Keywords熱力学 / 時間分解 / タンパク質 / 反応ダイナミクス / 過渡回折格子 / 反応中間体
Research Abstract

A new scientific research field "time-resolved thermodynamics" was created so that two important fields, the thermodynamics and the dynamics, are unified. This new technique was applied to researches of reaction mechanism of biological proteins and various thermodynamical properties, i.e., enthalpy, partial molar volume, heat capacity change and so on, have been measured in time domain for the first time. Many spectrally silent dynamics of protein reactions were elucidated and reaction mechanisms in molecular level have been established.

Report

(6 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report   Self-evaluation Report ( PDF )
  • 2007 Annual Research Report
  • 2006 Annual Research Report
  • Research Products

    (102 results)

All 2009 2008 2007 2006 Other

All Journal Article (81 results) (of which Peer Reviewed: 69 results) Presentation (13 results) Book (6 results) Remarks (2 results)

  • [Journal Article] Pressure-induced changes in the structure and function of the kinesin-microtubule complex2009

    • Author(s)
      M. Nishiyama, Y. Kimura, Y. Nishiyama, M. Terazima
    • Journal Title

      Biophys. J. 96

      Pages: 1142-1150

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Reaction dynamics of halorhodopsin studied by time-resolved diffusion2009

    • Author(s)
      K. Inoue, M. Kubo, M. Demura, N. Kamo, M. Terazima
    • Journal Title

      Biophys. J. 96

      Pages: 3724-3734

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Diffusion of gold ions and gold particles during photoreduction processes probed by the transient grating method2009

    • Author(s)
      M. Harada, K. Okamoto, M. Terazima
    • Journal Title

      J. Collo. Inter. Sci. 332

      Pages: 373-381

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Oligomeric State-Dependent Conformational Change of a BLUF Protein TePixD (Tll0078)2009

    • Author(s)
      K. Tanaka, Y. Nakasone, K. Okajima, M. Ikeuchi, S. Tokutomi, M. Terazima
    • Journal Title

      J. Mol. Biol. 386

      Pages: 1290-1300

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Charge effect on the diffusion coefficient and the bimolecular reaction rate of diiodide anion radical in room temperature ionic liquids2009

    • Author(s)
      Y. Nishiyama, M. Terazima, Y. Kimura
    • Journal Title

      J. Phys. Chem. B 113

      Pages: 5188-5193

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Raman spectroscopic study on solvation of p-aminobenzonitrile in supercritical water and methanol2009

    • Author(s)
      K. Osawa, T. Hamamoto, T. Fujisawa, M. Terazima, H, Sato, Y. Kimura
    • Journal Title

      J. Phys. Chem. A 113

      Pages: 3143-3154

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Reaction dynamics of halorhodopsin studied by time-resolved diffusion2009

    • Author(s)
      K.Inoue, et al.
    • Journal Title

      Biophys. J. 96

      Pages: 3724-3734

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Oligomeric State-Dependent Conformational Change of a BLUF Protein TePixD2009

    • Author(s)
      K.Tanaka, et al.
    • Journal Title

      J. Mol. Biol. 386

      Pages: 1290-1300

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Diffusion of gold ions and gold particles during photoreduction processes probed by the transient prating2009

    • Author(s)
      M.Harada, et al.
    • Journal Title

      J.Collo. Inter.Sci. 332

      Pages: 373-381

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Energetics and role of hydrophobic interaction during photoreaction of BLUF domain of AppA2008

    • Author(s)
      P. Hazra, K. Inoue, W. Laan, K.J. Hellingwerf, M. Terazima
    • Journal Title

      J. Phys. Chem. B 112

      Pages: 1494-1501

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Conformational changes in the N-terminal region of photoactive yellow protein: A time-resolved diffusion study2008

    • Author(s)
      Y. Hoshihara, Y. Imamoto, M. Kataoka, F. Tokunaga, M. Terazima
    • Journal Title

      Biophys. J. 94

      Pages: 2187-2193

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Raman spectroscopic study on the solvation of decafluorobenzeophenone ketyl radical and related compounds in 2-propanol from ambient to supercritical temperature2008

    • Author(s)
      T. Fujisawa, T. Ito, M. Terazima, Y. Kimura
    • Journal Title

      J. Phys. Chem. A 112

      Pages: 1914-1921

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Transient grating study on vibrational energy relaxation of bridged azulene-anthracene's, H. Fujiwara2008

    • Author(s)
      M. Terazima, Y. Kimura
    • Journal Title

      Chem. Phys. Lett. 454

      Pages: 218-222

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] M. Fukuda, M. Terazima, Y. Kimura2008

    • Author(s)
      Study of sound velocity dispersion in room temperature ionic liquids by the transient grating method
    • Journal Title

      J. Chem. Phys. 128

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Signal transmission through the HtrII transducer alters the interaction of twoα-helices in the HAMP domain2008

    • Author(s)
      K. Inoue, J. Sasaki, J.L. Spudich, M. Terazim
    • Journal Title

      J. Mol. Biol. 376

      Pages: 963-970

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Protein diffusion probed by the transient grating method with a new type of photochromic molecule2008

    • Author(s)
      T. Eitoku, M. Terazima
    • Journal Title

      Photochem. Photbiol. 84

      Pages: 869-873

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Sound velocity dispersion in room temperature ionic liquids studied by the transient grating method2008

    • Author(s)
      M. Fukuda, M. Terazima, Y. Kimura
    • Journal Title

      J. Chem. Phys. 128

      Pages: 114508-114508

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Solvent Effects on the Local Structure of p-Nitroaniline in Supercritical Water and Supercritical Alcohols2008

    • Author(s)
      T. Fujisawa, M. Terazima, Y. Kimura
    • Journal Title

      J. Phys. Chem. A 112

      Pages: 5515-5526

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Study of the translational diffusion of the benzophenone ketyl radical in comparison with stable molecules in room temperature ionic liquids by transient grating spectroscopy2008

    • Author(s)
      Y. Nishiyama, M. Fukuda, M. Terazima, Y. Kimura
    • Journal Title

      J. Chem. Phys. 128

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] An optical high-pressure cell for transient grating measurements of biological substance with a high reproducibility2008

    • Author(s)
      Y. Hoshihara, Y. Kimura, M. Matsumoto, M. Nagasawa, M. Terazima
    • Journal Title

      Rev. Sci. Instrum. 79

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Charge stabilization in reaction center protein investigated by optical heterodyne detected transient grating spectroscopy2008

    • Author(s)
      H. Omori, L. Nagy, M. Dorogi, M. Terazima
    • Journal Title

      Eur. Biophys. J. 37

      Pages: 1167-1174

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Distribution analysis for single molecule FRET measurement2008

    • Author(s)
      K. Okamoto, M. Terazima
    • Journal Title

      J. Phys. Chem. B 112

      Pages: 7308-7314

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Thermodynamics of apoplastocyanin folding: Comparison between experimental and theoretical results2008

    • Author(s)
      T. Yoshidome, M. Kinoshita, S. Hirota, N. Baden, M. Terazima
    • Journal Title

      J. Chem. Phys. 128

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Transport properties of binary mixtures of carbon dioxide and 1-butyl-3-methylimidazolium hexafluorophosphate studied by transient grating spectroscopy2008

    • Author(s)
      M. Demizu, M. Terazima, Y. Kimura
    • Journal Title

      Anal. Sci. 24

      Pages: 1329-1334

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] G-quadruplex structures of human telomere DNA examined by single molecule FRET and BrG-substitution2008

    • Author(s)
      K. Okamoto, Y. Sannohe, T. Mashimo, H. Sugiyama, M. Terazima
    • Journal Title

      Bioorg. Med. Chem. 16

      Pages: 6873-6879

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Photochemical reaction and diffusion of caged calcium studied by the transient grating2008

    • Author(s)
      M. Kondoh, N. Baden, M. Terazima
    • Journal Title

      Chem. Phys. Lett. 462

      Pages: 58-63

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Stability of dimer and domain-domain interaction of Arabidopsis phototropin 1 LOV22008

    • Author(s)
      Y. Nakasone, T. Eitoku, K. Zikihara, D. Matsuoka, S. Tokutomi, M. Terazima
    • Journal Title

      J. Mol. Biol. 383

      Pages: 904-913

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Spectrally silent light induced conformation change in photosynthetic reaction centers2008

    • Author(s)
      L. Nagy, P. Maroti, M. Terazima
    • Journal Title

      FEBS Lett. 582

      Pages: 3657-3662

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Initial heating mechanism of fluids after photoexcitation of molecules in various phases2008

    • Author(s)
      M. Terazima
    • Journal Title

      Eur. Phys. J. ST 153

      Pages: 19-24

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] 隠されたタンパク質反応に光を当てる2008

    • Author(s)
      寺嶋正秀
    • Journal Title

      化学 63

      Pages: 20-24

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Energetics and role of hydrophobic interaction during photoreaction of BLUF domain of AppA2008

    • Author(s)
      P. Hazra, K.Inoue, W. Laan, K. J. Hellingwerf, M. Terazima
    • Journal Title

      J.Phys.Chem.B 112

      Pages: 1494-1501

    • Related Report
      2008 Self-evaluation Report
  • [Journal Article] Signal transmission through the HtrII transducer alters the interaction of two α-helices in the HAMP domain2008

    • Author(s)
      K. Inoue, J. Sasaki, J. L. Spudich, M.Terazima
    • Journal Title

      J.Mol.Biol. 376

      Pages: 963-970

    • Related Report
      2008 Self-evaluation Report
  • [Journal Article] Energetics and role of hydrophobic interaction during photoreactiotn of BLUF domain of AppA2008

    • Author(s)
      P. Hazra, K. Inoue, W. Laan, K. J. Hellingwerf, M. Terazima
    • Journal Title

      J. Phys. Chem. B 112

      Pages: 1494-1501

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cnfmriilal changenill th-N-terniinal region of photoactile yellow protein : A time-resolviff diffusion study2008

    • Author(s)
      Y. Hoshihara, Y. Imamoto, M. Kataoka, F. Touinaga, M. Terazima
    • Journal Title

      Biophys. J. 94

      Pages: 2187-2193

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Protein diffusion probed by the trsnsient grating method with a new type of photochromic molecule2008

    • Author(s)
      T. Eitdku, M. Terazima
    • Journal Title

      Photcichem. Photbiol. 84

      Pages: 869-873

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Application of the transient grating method to the investigation of the photo-thermalization process of malachite green in room temperature ionic liquids2007

    • Author(s)
      M. Fukuda, O. Kajimoto, M. Terazima, Y. Kimura
    • Journal Title

      J. Mol. Liq. 134

      Pages: 49-54

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Laser-induced Transient Grating Analysis of Dynamics of Interaction between Sensory Rhodopsin II D75N and the HtrII Transducer2007

    • Author(s)
      K. Inoue, J. Sasaki, J.L. Spudich, M. Terazima
    • Journal Title

      Biophys. J. 92

      Pages: 2028-2040

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Photo-reverse-reaction dynamics of octopus rhodopsin2007

    • Author(s)
      Inoue, M. Tsuda, M. Terazima
    • Journal Title

      Biophys. J. 92

      Pages: 3643-3651

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Dynamics of conformational changes of Arabidopsis phototropin 1 LOV2 with the linker domain2007

    • Author(s)
      Y. Nakasone, T. Eitoku, D. Matsuoka, S. Tokutomi, M. Terazima
    • Journal Title

      J. Mol. Biol. 367

      Pages: 432-442

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Transient dimerization and conformational change of a BLUF protein: YcgF2007

    • Author(s)
      Y. Nakasone, T. Ono, A. Ishii, S. Masuda, M. Terazima
    • Journal Title

      J. Am. Chem. Soc. 129

      Pages: 7028-7035

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Observation of pressure wave generated by focusing a femtosecond laser pulse inside a glass2007

    • Author(s)
      M. Sakakura, M. Terazima, K. Miura, K. Hirao, Y. Shimotsuma
    • Journal Title

      Opt. Express 15

      Pages: 5674-5686

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Raman spectroscopic study on the solvation of N, N-dimethyl-p-nitroaniline in room temperature ionic liquids2007

    • Author(s)
      Y. Kimura, T. Hamamoto, M. Terazima
    • Journal Title

      J. Phys. Chem. A 111

      Pages: 7081-7089

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Photochemical intermediates of Arabidopsis phototropin 2 LOV domains associated with conformational changes2007

    • Author(s)
      T. Eitoku, Y. Nakasone, K. Zikihara, D. Matsuoka, S. Tokutomi, M. Terazima
    • Journal Title

      J. Mol. Biol. 371

      Pages: 1290-1303

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Preparation of gold nanoparticles by the laser ablation in room temperature ionic liquids2007

    • Author(s)
      Y. Kimura, H. Takata, M. Terazima, T. Ogawa, S. Isoda
    • Journal Title

      Chem. Lett. 36

      Pages: 1130-1131

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Thermodynamical properties of reaction intermediates during apoplastocyanin folding in time-domain2007

    • Author(s)
      N. Baden, S. Hirota, T. Takabe, N. Funasaki, M. Terazima
    • Journal Title

      J. Chem. Phys. 127

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Heating and rapid cooling after photoexcitation of bulk glass by focusing a femtosecond laser pulse2007

    • Author(s)
      M. Sakakura, M. Terazima, Y. Shimotsuma, K. Miura, K. Hirao
    • Journal Title

      Opt. Express. 15

      Pages: 16800-16807

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] フェムト秒レーザーを用いた透明媒質内部加工における変形過程とエネルギー散逸過程の観測法2007

    • Author(s)
      坂倉政明, 寺嶋正秀, 三浦清貴, 平尾一之
    • Journal Title

      レーザー研究 35

      Pages: 109-115

    • NAID

      10018544556

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] 蛋白質反応における体積変化と圧力効果2007

    • Author(s)
      寺嶋正秀, 木村佳文, 星原悠司
    • Journal Title

      日本高圧力学会誌(The review of high pressure science and technology) 17,No1

      Pages: 4-12

    • NAID

      10018918306

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] 新しいバイオセンサーによるタンパク質間相互作用の時間分解検出2007

    • Author(s)
      寺嶋正秀
    • Journal Title

      生体の科学 58

      Pages: 366-369

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] 時間分解タンパク質間相互作用検出法とその応用2007

    • Author(s)
      寺嶋正秀
    • Journal Title

      生物物理学会誌 47

      Pages: 235-240

    • NAID

      110006369067

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Photo-excitation dynamics of malachite green in ionic liquids studied by the transient grating method2007

    • Author(s)
      M. Fukuda, O. Kajimoto, M. Terazima, Y. Kimura
    • Journal Title

      Ultrafast Phenomena XV(edited by P. Corkum, D. Jonas, R.J.D. Miller, A.M. Weiner)(Springer)

      Pages: 294-296

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Microscopic Analysis of kinesin-microtuble complex under high hydrostatic pressure2007

    • Author(s)
      M. Nishiyama, Y. Kimura, M. Terazima
    • Journal Title

      Biophys. J.

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] A line-scanning multiphoton fluorescence spectromicroscope applied to the study of the thylakoid membrane in cyanobacteria and chloroplasts2007

    • Author(s)
      S. Kumazaki, M. Hasegawa, M. Ghoneim, M. Terazima, H. Oh-Oka, T. Shiina
    • Journal Title

      Photosynthesis research 91

      Pages: 211-211

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] 分子分光による生体分子科学の進展2007

    • Author(s)
      寺嶋正秀
    • Journal Title

      学術の動向 12

      Pages: 72-73

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Thermodynamical properties of reaction intermediates during apoplastocyanin folding in time-domain2007

    • Author(s)
      N. Baden, S. Hirota, T. Takabe, N. Funasaki, M. Terazima
    • Journal Title

      J.Chem.Phys. 127

    • Related Report
      2008 Self-evaluation Report
  • [Journal Article] Transient dimerization and conformational change of a BLUF protein: YcgF2007

    • Author(s)
      Y.Nakasone, T.Ono, A.Ishii, S.Masuda, M.Terazima
    • Journal Title

      J.Am.Chem.Soc. 129

      Pages: 7028-7035

    • Related Report
      2008 Self-evaluation Report
  • [Journal Article] Thermodynamical properties of reaction intermediates during apoplastocyanin folding in time-domain2007

    • Author(s)
      N. Baden
    • Journal Title

      J. Chem. Phys. 127

      Pages: 1-12

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Raman spectroscopic study on the solvation of N,N-dimethyl-p-nitroaniline in room temperature ionic liquids2007

    • Author(s)
      Y. Kimura
    • Journal Title

      J. Phys. Chem. A. 111

      Pages: 7081-7089

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Transient dimerization and conformational change of a BLUF protein: YcgF2007

    • Author(s)
      Y. Nakasone
    • Journal Title

      J. Am. Chem. Soc. 129

      Pages: 7028-7035

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Time-resolved thermodynamics: Heat capacity change of transient species during photo-reaction of PYP.2006

    • Author(s)
      J.S. Khan, Y. Imamoto, M. Kataoka, F. Tokunaga, M. Terazima
    • Journal Title

      J. Am. Chem. Soc. 128

      Pages: 1002-1008

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Conformational changes of PYP monitored by diffusion coefficient: Effect of N-terminalα-helices2006

    • Author(s)
      J.S. Khan, Y. Imamoto, M. Harigai, M. Kataoka, M. Terazima
    • Journal Title

      Biophys. J. 90

      Pages: 3686-3693

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Raman spectroscopic study on solvation of diphenylcyclopropenone and phenol blue in room temperature ionic liquids2006

    • Author(s)
      T. Fujisawa, M. Fukuda, M. Terazima, Y. Kimura
    • Journal Title

      J. Phys. Chem. A 110

      Pages: 6164-6172

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Excitation wavelength dependence of the Raman stokes shift of N, N-dimethyl-p-nitroaniline2006

    • Author(s)
      T. Fujisawa, M. Terazima, Y. Kimura
    • Journal Title

      J. Chem. Phys. 124

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Conformational Changes during Apoplastocyanin Folding Observed by Photocleavable Modification and Transient Grating2006

    • Author(s)
      S. Hirota, Y. Fujimoto, J. Choi, N. Baden, N. Katagiri, M. Akiyama, R. Hulsker, M. Ubbink, T. Okajima, T. Takabe, N. Funasaki, Y. Watanabe, M. Terazima
    • Journal Title

      J. Am. Chem. Soc. 128

      Pages: 7551-7558

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Kinetic measurement of transient dimerization and dissociation reactions of Arabidopsis phototropin 1 LOV2 domain2006

    • Author(s)
      Y. Nakasone, T. Eitoku, D. Matsuoka, S. Tokutomi, M. Terazima
    • Journal Title

      Biophys. J. 91

      Pages: 645-653

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Tetramer Formation Kinetics in the Signaling State of AppA monitored by the time-resolved diffusion2006

    • Author(s)
      P. Hazra, K. Inoue, W. Laan, K.J. Hellingwerf, M. Terazima
    • Journal Title

      Biophys. J. 91

      Pages: 654-661

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Time-resolved detection of conformational changes in Oat Phytochrome A: Time-dependent diffusion2006

    • Author(s)
      T. Eitoku, X. Zarate, G.V. Kozhukh, J.-I. Kim, P.-S. Song, M. Terazima
    • Journal Title

      Biophys. J. 91

      Pages: 3797-3804

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Study on the vibrational energy relaxation of p-nitroaniline, N, N-dimethyl-p-nitroaniline and azulene by the transient grating method2006

    • Author(s)
      Y. Kimura, M. Fukuda, O. Kajimoto, M. Terazima
    • Journal Title

      J. Chem. Phys. 125

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Diffusion of the platinum ions and platinum nanoparticles during the photoreduction processes using the transient grating method2006

    • Author(s)
      M. Harada, K. Okamoto, M. Terazima
    • Journal Title

      Langmire 22

      Pages: 9142-9149

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Intermolecular interaction of myoglobin with water molecules along the pH-denaturation curve2006

    • Author(s)
      N. Baden, M. Terazima
    • Journal Title

      J. Phys. Chem. B 110

      Pages: 15548-15555

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Diffusion coefficients as a monitor of reaction kinetics of biological molecules2006

    • Author(s)
      M. Terazima
    • Journal Title

      Phys. Chem. Chem. Phys. 8

      Pages: 545-557

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] 植物はどうやって光を見るのか:青色光受容の分子ダイナミクス解明に向けて2006

    • Author(s)
      寺嶋正秀
    • Journal Title

      化学 61,No.3

      Pages: 72-73

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Ligand dissociation process from Myoglobin monitored by the time-resolved volume change2006

    • Author(s)
      M. Terazima
    • Journal Title

      J. Chine. Chem. Soc. 53

      Pages: 253-262

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Conformational Changes during Apoplastocyanin Folding Observed by Photocleavable Modification and Transient Grating2006

    • Author(s)
      S.Hirota, Y.Fujimoto, J.Choi, N.Baden, N.Katagiri, M.Akiyama, R.Hulsker, M.Ubbink, T.Okajima, T.Takabe, N.Funasaki, Y. Watanabe, M.Terazima
    • Journal Title

      J.Am.Chem.Soc 128

      Pages: 7551-7558

    • Related Report
      2008 Self-evaluation Report
  • [Journal Article] Time-resolved detection of conformational changes in Oat Phytochrome A: Time-dependent diffusion2006

    • Author(s)
      T.Eitoku, X.Zarate, G.V. Kozhukh, J.-I.Kim, P.-S. Song, M.Terazima
    • Journal Title

      Biophys.J. 91

      Pages: 3797-3804

    • Related Report
      2008 Self-evaluation Report
  • [Journal Article] Conformational Changes during Apoplastocyanin Folding Observed by Photocleavable Modification and Transient Grating.2006

    • Author(s)
      S.Hirota
    • Journal Title

      J. Am. Chem. Soc. 128

      Pages: 7551-7558

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Kinetic measurement of transient dimerization and dissociation reaction of Arabidopsis phototoropin 1 LOV2 domain.2006

    • Author(s)
      Y.Nakasone
    • Journal Title

      Biophys. J. 91

      Pages: 645-653

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Tetramer Formation Kinetics in the Signaling State of AppA monitored by the time-resolved diffusion.2006

    • Author(s)
      P.Hazra
    • Journal Title

      Biophys. J. 91

      Pages: 654-661

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Time-resolved detection of conformational changes in Oat Phytochrome A : Time-dependent diffusion.2006

    • Author(s)
      T.Eitoku
    • Journal Title

      Biophys. J. 91

      Pages: 3797-3804

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Diffusion coefficienits as a monitor of reaction kinetics of biological molecules.2006

    • Author(s)
      M.Terazima
    • Journal Title

      Phys. Chem. Chem. Phys. 8

      Pages: 545-557

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Ligand dissociation process from Myoglobin monitored by the time-resolved volume change.2006

    • Author(s)
      M.Terazima
    • Journal Title

      J. Chine. Chem. Soc. 53

      Pages: 253-262

    • Related Report
      2006 Annual Research Report
  • [Presentation] Time-Resolved Thermodynamics of Chemical Reactions2009

    • Author(s)
      Y. Nakasone, S. Tokutomi, M. Terazima
    • Organizer
      24th European Symposium on Applied Thermodynamics
    • Place of Presentation
      Santiago de Compostela, SPAIN
    • Related Report
      2009 Final Research Report
  • [Presentation] Detection of protein fluctuations during reactions by the time-resolved thermodynamics2009

    • Author(s)
      M. Terazima
    • Organizer
      生物物理年会
    • Place of Presentation
      徳島
    • Related Report
      2009 Final Research Report
  • [Presentation] 光回復酵素のDNA修復反応における酵素-基質間相互作用ダイナミクス2009

    • Author(s)
      近藤正人
    • Organizer
      分子科学討論会
    • Place of Presentation
      名古屋
    • Related Report
      2009 Annual Research Report
  • [Presentation] アポプラストシアニン折りたたみの熱力学理論と実験との定量的比較2008

    • Author(s)
      吉留崇, 木下正弘, 廣田俊, 馬殿直樹, 寺嶋正秀
    • Organizer
      第31回溶液化学シンポジウム
    • Place of Presentation
      近畿大学
    • Related Report
      2009 Final Research Report
  • [Presentation] Direct time-resolved measurement of the thermodynamical properties of photoreceptor protein "phototropin".2008

    • Author(s)
      Y. Nakasone, T. Ono, A. Ishii, S. Masuda, M. Terazima
    • Organizer
      Gordon Research Conference on Photoacoustic and Photothermal Phenomena
    • Place of Presentation
      Ventura, USA
    • Related Report
      2009 Final Research Report
  • [Presentation] Time-Resolved Thermodynamics of Biological Proteins2008

    • Author(s)
      M. Terazima
    • Organizer
      23rd European Symposium on Applied Thermodynamics
    • Place of Presentation
      Riviera, France
    • Related Report
      2009 Final Research Report
  • [Presentation] アポプラストシアニン折りたたみの熱力学理論と実験との定量的比較2008

    • Author(s)
      吉留崇、木下正弘、廣田俊、馬殿直樹、寺嶋正秀
    • Organizer
      第31 回溶液化学シンポジウム
    • Related Report
      2008 Self-evaluation Report
  • [Presentation] アポブラストシアニン折りたたみの熱力学理論と実験との定量的比較2008

    • Author(s)
      寺嶋正秀
    • Organizer
      第31回液化学シンポジウム
    • Place of Presentation
      近畿大学(大阪)
    • Related Report
      2008 Annual Research Report
  • [Presentation] AppA-BLUFドメインの光反応における熱力学的ダイナミクスの解明2007

    • Author(s)
      Partha Hazra, 井上圭一, W. Laan, K.J. Hellingwerf, 寺嶋正秀
    • Organizer
      日本化学会第87春季年会
    • Place of Presentation
      関西大学
    • Related Report
      2009 Final Research Report
  • [Presentation] 時間分解熱力学量から見た、青色光センサーPhototropinの光反応構造変化2007

    • Author(s)
      永徳丈, 中曽根祐介, 松岡大介, 徳富哲, 寺嶋正秀
    • Organizer
      日本化学会第87春季年会
    • Place of Presentation
      関西大学
    • Related Report
      2009 Final Research Report
  • [Presentation] 青色光センサー蛋白質フォトトロピンの光反応分子機構とその熱力学的ダイナミクス2007

    • Author(s)
      中曽根祐介, 永徳丈, 松岡大介, 直原一徳, 徳富哲, 寺嶋正秀
    • Organizer
      第1回分子科学討論会
    • Place of Presentation
      仙台
    • Related Report
      2009 Final Research Report
  • [Presentation] Conformational change of photoactive yellow protein studied by the time-resolved thermodynamics2007

    • Author(s)
      P. Hazra, 今元泰, 針貝美樹, 片岡幹雄, 寺嶋正秀
    • Organizer
      第1回分子科学討論会
    • Place of Presentation
      仙台
    • Related Report
      2009 Final Research Report
  • [Presentation] タンパク質反応解明を目指した生体分子科学研究2007

    • Author(s)
      寺嶋 正秀
    • Organizer
      第1回分子科学討論会
    • Place of Presentation
      仙台
    • Related Report
      2007 Annual Research Report
  • [Book] 可視・紫外分光法2009

    • Author(s)
      寺嶋正秀, 馬場正昭, 冨宅喜代一, 星野幹雄, 松本剛昭, 宮崎芳雄, 西澤潔
    • Publisher
      講談社サイエンティフィック
    • Related Report
      2009 Final Research Report
  • [Book] Time-resolved detection of intermolecular interaction of photosensor proteins2009

    • Author(s)
      M. Terazima, Water, Biomolecules
    • Publisher
      Springer
    • Related Report
      2009 Final Research Report
  • [Book] Water and Biomolecules, Physical Chemistry of Life Phenomena, Eds. K.Kuwajima, Y.Goto, F.Hirata, M.Kataoka, M.Terazima2009

    • Author(s)
      M.Terazima
    • Total Pages
      23
    • Publisher
      Springer
    • Related Report
      2009 Annual Research Report
  • [Book] Water and Biomolecules, Physical Chemistry of Life Phenomena, Eds(K.Kuwajima, Y.Goto, F.Hirata, M.kataoka, M.Terazima)2009

    • Author(s)
      M. Terazima
    • Publisher
      Time-resolved detection of intermolecular interaction of photosensor proteins
    • Related Report
      2008 Self-evaluation Report
  • [Book] フェムト秒テクノロジー(フェムト秒過渡回折格子法と過渡レンズ法による高速エネルギー・構造変化ダイナミクス観測)2006

    • Author(s)
      寺嶋正秀
    • Publisher
      化学同人
    • Related Report
      2009 Final Research Report
  • [Book] 基礎物理化学2006

    • Author(s)
      梶本興亜, 寺嶋正秀, 佐藤啓文
    • Publisher
      培風館
    • Related Report
      2009 Final Research Report 2006 Annual Research Report
  • [Remarks]

    • URL

      http://kuchem.kyoto-u.ac.jp/hikari/index.html

    • Related Report
      2009 Final Research Report
  • [Remarks]

    • URL

      http://kuchem.kyoto-u.ac.jp/hikari/index.html

    • Related Report
      2008 Self-evaluation Report

URL: 

Published: 2006-04-01   Modified: 2016-04-21  

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