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Development study of the prediction system using mouse ES cells to detect next generation influences

Research Project

Project/Area Number 18310025
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Environmental impact assessment/Environmental policy
Research InstitutionNational Institute for Environmental Studies

Principal Investigator

SONE Hideko  National Institute for Environmental Studies, 環境リスク研究センター, 主任研究員 (60280715)

Co-Investigator(Kenkyū-buntansha) NAGANO Reiko  独立行政法人国立環境研究所, 環境リスク研究センター, NIESポスドクフェロー (20455249)
IMANISHI Satoshi  独立行政法人国立環境研究所, 環境リスク研究センター, NIESポスドクフェロー (50462479)
ZAHA Hiroko  独立行政法人国立環境研究所, 環境リスク研究センター, NIESアシスタントフェロー (10391111)
YAMZAKI Shin  独立行政法人国立環境研究所, 環境健康研究領域, 研究員 (80391168)
TOYOSHIBA Hiroyoshi  独立行政法人国立環境研究所, 環境健康研究領域, NIESポスドクフェロー (40315073)
Co-Investigator(Renkei-kenkyūsha) AKANUMA Hiromi  独立行政法人国立環境研究所, 環境リスク研究センター, NIESアシスタントフェロー (70534155)
OHSAKO Seiichiroh  東京大学, 大学院・医学系研究科・疾患生命工学センター, 准教授 (00274837)
Project Period (FY) 2006 – 2008
Project Status Completed (Fiscal Year 2008)
Budget Amount *help
¥13,620,000 (Direct Cost: ¥11,400,000、Indirect Cost: ¥2,220,000)
Fiscal Year 2008: ¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2007: ¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2006: ¥4,000,000 (Direct Cost: ¥4,000,000)
Keywords影響評価手法 / 健康影響評価 / 次世代環境影響評価 / ゲノムネットワーク / システムバイオロジー / マウス胚性幹細胞 / レチノイン酸 / 遺伝子発現ネットワーク / 化学物質 / マルチプロファイリング
Research Abstract

マウス胚性幹細胞の多機能性を利用して、化学物質曝露による細胞の形態変化とその時の遺伝子発現量を計測し、遺伝子発現ネットワーク情報と曝露影響情報との関連付けを数理工学的に解析し、化学物質の曝露量や時間変化による分子間ネットワークの特徴づけを試みる。そして、化学物質ごとの遺伝子ネットワークのプロファイリングを作成し、毒性反応メカニズムの解明、化学物質の毒性予測及びリスク評価のための基盤資料とする。

Report

(4 results)
  • 2008 Annual Research Report   Final Research Report ( PDF )
  • 2007 Annual Research Report
  • 2006 Annual Research Report
  • Research Products

    (40 results)

All 2009 2008 2007 2006

All Journal Article (10 results) (of which Peer Reviewed: 6 results) Presentation (25 results) Book (4 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] XIV Biennial Meeting of the Society for Free Radical Research International2009

    • Author(s)
      Sone H
    • Journal Title

      MEDIMOND SRL

      Pages: 245-251

    • Related Report
      2008 Annual Research Report
  • [Journal Article] Perinatal exposure of female rats to 2,3,7,8-tetrachlorodibenzo-p-dioxin induces central precocious puberty in the offspring.2008

    • Author(s)
      Kakeyama M, Sone H, Tohyama C.
    • Journal Title

      J Endocrinol. May 197(2)

      Pages: 351-8

    • Related Report
      2008 Final Research Report
    • Peer Reviewed
  • [Journal Article] 環境化学物質の子どもへの健康影響を探る-男児生殖器異常症のインフォマティクスを用いた疾患感受性遺伝子の探索、一塩基多型SNPを指標として2008

    • Author(s)
      曽根秀子、米元純三
    • Journal Title

      ビオフィリア 4(2)

      Pages: 25-29

    • Related Report
      2008 Final Research Report
    • Peer Reviewed
  • [Journal Article] Persistent organic Pollutants (POPS) Research in Asia2008

    • Author(s)
      Sone H
    • Journal Title

      Morita M(自費出版)

      Pages: 257-261

    • Related Report
      2008 Annual Research Report
  • [Journal Article] 環境化学物質の子どもへの健康影響を探る-男児生殖器異常症のインフォマティクスを用いた疾患感受性遺伝子の探索2008

    • Author(s)
      曽根秀子
    • Journal Title

      ビオフィリア 4(2)

      Pages: 25-29

    • Related Report
      2008 Annual Research Report
  • [Journal Article] Perinatal exposure of female rats to 2,3,7,8-tetrachlorodibenzo-p-dioxin induces central precocious puberty in the offspring2008

    • Author(s)
      Kakeyama M
    • Journal Title

      J Endocrinol 197(2)

      Pages: 351-8

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Estrogen-responsive genes newly found to be modified by TCDD exposure in human cell lines and mouse systems2007

    • Author(s)
      Tanaka J, Yonemoto J, Zaha H, Kiyama R and Sone H
    • Journal Title

      Mol Cell Endocrinol. Jun 30 272(1-2)

      Pages: 38-49

    • Related Report
      2008 Final Research Report
    • Peer Reviewed
  • [Journal Article] Gene interaction network analysis suggests differences between high and low doses of acetaminophen2006

    • Author(s)
      Toyoshiba H, Sone H, Yamanaka T, Parham FM, Irwin RD, Boorman GA, Portier CJ
    • Journal Title

      Toxicol Appl Pharmacol. Sep 15 215(3)

      Pages: 306-16

    • Related Report
      2008 Final Research Report
    • Peer Reviewed
  • [Journal Article] Comparative analysis of gene networks at multiple doses and time points in livers of rats exposed to acetaminophen.2006

    • Author(s)
      Portier CJ, Toyoshiba H, Sone H, Parham F, Irwin RD, Boorman GA.
    • Journal Title

      ALTEX. 23

    • Related Report
      2008 Final Research Report
    • Peer Reviewed
  • [Journal Article] Gene interaction network analysis suggests differences between high and low doses of acetaminophen.2006

    • Author(s)
      Toyoshiba H.
    • Journal Title

      Toxicology and Applied Pharmacology. 215(3)

      Pages: 306-316

    • Related Report
      2006 Annual Research Report
  • [Presentation] Prenatal Exposure to Permethrin Causes Vascular Malformation in Fetal Brain and Decreases Motility of Adult Mice2009

    • Author(s)
      Imanishi S, Akanuma H, Okura M, Sone H.
    • Organizer
      48th Annual Meeting of Society of Toxicology
    • Place of Presentation
      Baltimore
    • Year and Date
      2009-03-19
    • Related Report
      2008 Annual Research Report
  • [Presentation] Stage-Specific Gene profiling during neural differentiation of mouse embryonic stem cells2009

    • Author(s)
      Akanuma h., Nagano R., Imanishi S., Toyoshiba H., Sone H
    • Organizer
      48th Annual Meeting of Society of Toxicology. 2008
    • Place of Presentation
      Baltimore
    • Year and Date
      2009-03-18
    • Related Report
      2008 Annual Research Report
  • [Presentation] 「Micro Sphere Array を応用した新規な化学物質評価モデルの開発〜マウスES細胞から神経細胞への分化を形で評価する〜」創薬研究および幹細胞研究におけるハイコンテントアナリシス技術の可能性2008

    • Author(s)
      永野麗子
    • Organizer
      IN Cell User's Day
    • Place of Presentation
      東京
    • Year and Date
      2008-11-28
    • Related Report
      2008 Annual Research Report
  • [Presentation] 化学物質の毒性予測及びリスク評価手法確立のための基盤システムの構築2008

    • Author(s)
      曽根秀子 黄倉雅広
    • Organizer
      第4回日本バイオインフォマティクス学会:オントロジー研究会
    • Place of Presentation
      東京
    • Year and Date
      2008-10-28
    • Related Report
      2008 Annual Research Report
  • [Presentation] Gene Expression Signatures of Environmental Chemicals in Cancer and in Developmental Disorders2008

    • Author(s)
      Sone H, Imanishi S, Nagano R, Akanuma H, Fukuda T, Ohsako S.
    • Organizer
      14th Biennial Meeting of the Society for Free Radical Research International
    • Place of Presentation
      Beijing
    • Year and Date
      2008-10-20
    • Related Report
      2008 Annual Research Report
  • [Presentation] A Genome Informatics and Epidemiological Study Identifies Alleles in Arnt2 associated with Risk of Hypospadias and Micropenis2008

    • Author(s)
      Sone H, Yonemoto J
    • Organizer
      28th Int. Symp. Halogenat. Persistent Org. pollut. -Dioxin 2008
    • Place of Presentation
      Birmingham
    • Year and Date
      2008-08-20
    • Related Report
      2008 Annual Research Report
  • [Presentation] Cellular image profiling of neural differentiation pattern of mouse embryonic stem cells with morphological information2008

    • Author(s)
      Nagano R, Shigeru K, Imanishi S, Ohsako S, Zaha H, Ohkura M, Yonemoto J, and Sone H.
    • Organizer
      第41回日本発生生物学会
    • Place of Presentation
      徳島
    • Related Report
      2008 Annual Research Report 2008 Final Research Report
  • [Presentation] ES細胞から神経系の分化過程における遺伝子ネットワーク解析2008

    • Author(s)
      赤沼宏美、永野麗子、小池上繁、今西哲、豊柴博義、黄倉雅広、曽根秀子
    • Organizer
      第11回日本内分泌撹乱化学物質学会
    • Place of Presentation
      東京
    • Related Report
      2008 Annual Research Report 2008 Final Research Report
  • [Presentation] マウスES細胞を用いたマルチプロファイリング技術による化学物質の影響評価の開発2008

    • Author(s)
      永野麗子、小池上 繁、今西 哲、赤沼宏美、宮崎 航、大迫誠一郎、黄倉雅広、曽根秀子
    • Organizer
      第11回日本内分泌撹乱化学物質学会
    • Place of Presentation
      東京
    • Related Report
      2008 Annual Research Report 2008 Final Research Report
  • [Presentation] ヒト血管内皮細胞とマウスES細胞を用いたペルメトリンの血管毒性の評価2008

    • Author(s)
      今西哲・米元純三・曽根秀子
    • Organizer
      第11回日本内分泌撹乱化学物質学会
    • Place of Presentation
      東京
    • Related Report
      2008 Annual Research Report 2008 Final Research Report
  • [Presentation] 化学物質の毒性予測及びリスク評価手法確立のための基盤システムの構築2008

    • Author(s)
      曽根秀子, 黄倉雅広
    • Organizer
      第4回日本バイオインフォマティクス学会:オントロジー研究会
    • Related Report
      2008 Final Research Report
  • [Presentation] A Genome Informatics and Epidemiological Study Identifies Alleles in Arnt2 associated with Risk of Hypospadias and Micropenis.2008

    • Author(s)
      Sone H and Yonemoto J.
    • Organizer
      28th Int. Symp. Halogenat. Persistent Org. pollut.-Dioxin 2008
    • Place of Presentation
      Birmingham
    • Related Report
      2008 Final Research Report
  • [Presentation] Stage-Specific Gene profiling during neural differentiation of mouse embryonic stem cells.2008

    • Author(s)
      Akanuma H, Nagano R, Imanishi S, Toyoshiba H, Sone H.
    • Organizer
      48th Annual Meeting of Society of Toxicology
    • Place of Presentation
      Baltimore
    • Related Report
      2008 Final Research Report
  • [Presentation] Evaluation of Vascular Toxicity of Permethrin in Human Endothelial Cell and Mouse ES Cell2008

    • Author(s)
      Satoshi Imanishi, Junzo Yonemoto, Hideko Sone
    • Organizer
      SOT Annual meeting
    • Place of Presentation
      Seattle
    • Related Report
      2007 Annual Research Report
  • [Presentation] レチノイン酸によるマウスES細胞の分化・増殖への影響に関する研究2007

    • Author(s)
      永野麗子、小池上 繁、今西 哲、座波ひろこ、米元純三、曽根秀子
    • Organizer
      環境ホルモン学会第10回研究発表会12
    • Place of Presentation
      埼玉
    • Related Report
      2008 Final Research Report
  • [Presentation] Bayesian Network Analysis on Cell Morphology.2007

    • Author(s)
      Koikegami S and Sone H.
    • Organizer
      日本バイオインフォマティクス学会12
    • Place of Presentation
      東京
    • Related Report
      2008 Final Research Report
  • [Presentation] A Framework for the Development of a Prediction System for Determining the Effects of Exposure to Environmental Chemicals on Children's Health.2007

    • Author(s)
      Sone H
    • Organizer
      International Science Forum on Computational Toxicology
    • Related Report
      2008 Final Research Report
  • [Presentation] A Microarray-Oriented Dioxin-Response Gene Database (DRGdb) Built in the National Institute for Environmental Studies, Japan.2007

    • Author(s)
      Ohsako S, Nishikawa D, Ogi S, Hamada K, Sone H.
    • Organizer
      International Science Forum on Computational Toxicology
    • Place of Presentation
      North Calorina, USA
    • Related Report
      2008 Final Research Report
  • [Presentation] A Framework for the Development of a Prediction System for Determining the Effects of Exposure to Environmental Chemicals on Children's Health2007

    • Author(s)
      曽根 秀子
    • Organizer
      International Science Forum on Computational Toxicology
    • Place of Presentation
      米国・RTP
    • Related Report
      2007 Annual Research Report
  • [Presentation] Establishment of a System using Mouse Embryonic Stem Cells to Evaluate for the Effects of Chemicals on Development2007

    • Author(s)
      曽根 秀子
    • Organizer
      6th World Congress on Alternative&Animal Use in the Life Sciences
    • Place of Presentation
      東京
    • Related Report
      2007 Annual Research Report
  • [Presentation] レチノイン酸によるマウスES細胞の分化・増殖への影響に関する研究2007

    • Author(s)
      永野 麗子、小池上 繁、今西 哲、座波 ひろこ、米元 純三、曽根 秀子
    • Organizer
      環境ホルモン学会第10回研究発表会
    • Place of Presentation
      埼玉
    • Related Report
      2007 Annual Research Report
  • [Presentation] 殺虫剤ペルメトリンがヒト脳毛細血管内皮細胞に及ぼす影響2007

    • Author(s)
      今西 哲、米元 純三、曽根 秀子
    • Organizer
      環境ホルモン学会第10回研究発表会
    • Place of Presentation
      埼玉
    • Related Report
      2007 Annual Research Report
  • [Presentation] Bayesian Network Analysis on Cell Morphology2007

    • Author(s)
      Koikegami H, Hideko Sone
    • Organizer
      日本バイオインフォマティクス学会
    • Place of Presentation
      東京
    • Related Report
      2007 Annual Research Report
  • [Presentation] 遺伝子ネットワーク推定を利用した環境化学物質及び薬剤の類型化手法の開発に関する研究2006

    • Author(s)
      曽根秀子、豊柴博義
    • Organizer
      第65回日本癌学会学術総会
    • Place of Presentation
      横浜
    • Related Report
      2008 Final Research Report
  • [Presentation] 発がんに関わる内分泌かく乱化学物質の影響予測システム構築に関する研究2006

    • Author(s)
      曽根秀子、座波ひろ子、黄倉雅広、米元純三
    • Organizer
      環境ホルモン学会第9回研究発表会
    • Place of Presentation
      東京
    • Related Report
      2008 Final Research Report
  • [Book] Gene Expression Signatures of Environmental Chemicals in Cancer and in Developmental Disorders. In "XIV Biennial Meeting of the Society for Free Radical Research International"2009

    • Author(s)
      Sone H, Imanishi S, Nagano R, Akanuma H, Fukuda T, Ohsako S.
    • Publisher
      MEDIMOND SRL Publ.
    • Related Report
      2008 Final Research Report
  • [Book] High-Performance Gene Expression Module Analysis Tool and Its Application to Chemical Toxicity Data. In : Furuseki H. ed., Reverse chemical genetics2009

    • Author(s)
      Fujibuchi W, Kim H, Okada Y, Taniguchi T and Sone H.
    • Publisher
      Humana Press Publ.
    • Related Report
      2008 Final Research Report
  • [Book] Reverse chemical genetics2009

    • Author(s)
      Fujibuchi W
    • Total Pages
      275
    • Publisher
      Humana Press
    • Related Report
      2008 Annual Research Report
  • [Book] Does maternal exposure to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) induce glutathione S-transferase-positive hepatic foci in adult rats? In: Morita M. ed., Persistent organic Pollutants (POPS) Research in Asia2008

    • Author(s)
      Sone H, Miyabara Y, Fukuda T, Okura M, Ohsako S, Yonemoto J.
    • Related Report
      2008 Final Research Report
  • [Patent(Industrial Property Rights)] 胎生プログラミングに対する影響を評価するための方法2009

    • Inventor(s)
      曽根秀子、永野麗子、大迫誠一郎、宮崎航、今西哲、赤沼宏美
    • Industrial Property Rights Holder
      国立環境研究所
    • Industrial Property Number
      2009-081497
    • Filing Date
      2009-03-30
    • Related Report
      2008 Final Research Report

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Published: 2006-04-01   Modified: 2016-04-21  

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