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Thermal tolerance of prokaryote on surface of substrates

Research Project

Project/Area Number 18340170
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Petrology/Mineralogy/Science of ore deposit
Research InstitutionThe University of Tokyo

Principal Investigator

URABE Tetsuro  The University of Tokyo, Graduate School of Science, Professor (50107687)

Co-Investigator(Kenkyū-buntansha) SUNAMURA Michinari  The University of Tokyo, Graduate School of Science, Assistant Professor (90360867)
ISHIBASHI Jun-ichiro  Kyushu University, Graduate School of Science, Assistant Professor (20212920)
丸山 明彦  産業技術総合研究所, 生物機能工学研究部門, 主任研究員 (30202336)
Project Period (FY) 2006 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥7,930,000 (Direct Cost: ¥7,300,000、Indirect Cost: ¥630,000)
Fiscal Year 2007: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Fiscal Year 2006: ¥5,200,000 (Direct Cost: ¥5,200,000)
Keywordsdeep bosphere / extremophile / geothemal / FISH / surface / water sampling
Research Abstract

One of the most crucial parameters that limits the habitable depth for extremophiles is temperature. The maximum temperature of growth for hyperthermophile is known to be 121 deg-C but some microbes live on a surface of substrates such as hydrothermal chimneys at temperatures more than 300 deg-C. Therefore, it is presumed that those attached to solid surface may be tolerable to extreme environment such as high temperature.
We examined this hypothesis by in-situ sampling from geothermal reservoir using high-temperature, borehole fluid sampler which is tolerant to temperature as high as 300 deg-C. This borehole sampler enables us to get geothermal fluid in-situ to pressure-tight sample chamber (1250 ml) without drastic pressure change. Besides, all the parts can be sterilized either by autoclave or heating up to 200 deg-C.
We applied the sampler to a geothermal well N18-OT-2 (1355m,>140 deg-C) that locates in Otari Village, Nagano Prefecture, central Japan. The fluid is rich in bicarbonate … More (2648 ppm), Na^+(1752 ppm) and Cl(1048 ppm). The oxygen isotopic content of the fluid (δ^<18>O<SMOW>=-8.3 permil) shows oxygen shift that is the sign of water rock interaction. The hydrogen isotopic content (^<18>D=-83 permil) is equivalent to local meteoric water. The dissolved organic carbon content (DOC) is as low as 4.55±0.53mg/L which is not high enough to assume intensive deep biosphere within the geothermal reservoir. Detailed geochemical and isotopic modeling indicate that the fluid was formed by 4:1 mixing between shallow, Ca-bearing hot spring water and CO_2 bearing deep geothermal fluid which may come form nearby Quaternary Kazafuki-dake volcano.
It is worthy to note that a novel (phylum-level) thermophilic chemo-heterotrophic filamentous bacterium was obtained from the hot spring. Detailed information will be disclosed after publication. On the other hand, small number of cells that attached to the calcite scale of the well at the depth of 593 meters cannot be cultured or identified by CARD-FISH method due to their paucity. Less

Report

(3 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • Research Products

    (48 results)

All 2008 2007 2006 Other

All Journal Article (29 results) (of which Peer Reviewed: 12 results) Presentation (12 results) Book (7 results)

  • [Journal Article] ベトナムの非鉄金属鉱物資源の概要2008

    • Author(s)
      石原舜三・浦辺徹郎・渡辺 寧
    • Journal Title

      資源地質 58(1)

      Pages: 27-36

    • NAID

      10021999644

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Marine shallow-water hydrothermal activity and mineralization at the Wakamiko crater in Kagoshima bay, south Kyushu, Japan.2008

    • Author(s)
      Ishibashi, J.-I., 他11名
    • Journal Title

      J. Volcanolog. Geothermal Research 173

      Pages: 84-98

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Diverse range of mineralization induced by phase separation of hydrothermal fluid: a case study of the Yonaguni IV hydrothermal field in the Okinawa Trough Backarc Basin2008

    • Author(s)
      Suzuki, R., J-I. Ishibashi, M. Nakaseama, U. Konno, U. Tsunogai, K. Gena, H. Chiba
    • Journal Title

      Resource Geol. (In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Marine shallow-water hydrothermal activity and mineralization at the Wakamiko crater in Kagoshima bay, Kyushu, Japan2008

    • Author(s)
      Ishibashi, J., et. al.
    • Journal Title

      J. Volcanol. Geotherm. Res 173

      Pages: 84-98

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Non-ferrous mineral resources in Vietnam (in Japanese with English Abst)2008

    • Author(s)
      Ishihara, S., Urabe, T., Watanabe, Y.
    • Journal Title

      Shigen Chishitsu 58(1)

      Pages: 27-36

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] 海底火山の噴火と熱水活動2007

    • Author(s)
      浦辺徹郎
    • Journal Title

      科学 77(12)

      Pages: 1297-1299

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Direct access to the sub-vent biosphere by shallow drilling2007

    • Author(s)
      Ishibashi, J., K. Marumo, A. Maruyama, and T. Urabe
    • Journal Title

      Oceanography 20,(1)

      Pages: 24-25

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Culture-dependent and - independent characterization of microbial communities associated with a shallow submarine hydrothermal system occurring within a coral reef off Taketomi Island, Japan.2007

    • Author(s)
      Hirayama H., M. Sunamura, K. Takai, T. Nunoura, T. Noguchi, H. Oida, Y. Furushima, H. Yamamoto, T. Oomori, K. Horikoshi
    • Journal Title

      Applied and Environmental Microbiology 73

      Pages: 7642-7656

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Food composition of crinoids (crinoidea: echinodermata) in relation to stalk length and fan density: their paleo-ecological implications.2007

    • Author(s)
      Kitazawa, K, T. Oji, and M. Sunamura
    • Journal Title

      Marine Biology 152

      Pages: 959-968

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Selective phylogenetic analysis targeting 16S rRNA genes of hyperthermophilic archea in the deep-subsurface hot biosphere2007

    • Author(s)
      Kimura, H., J.-I. Ishibashi, H. Masuda, K. Kato and S. Hanada
    • Journal Title

      Applied Envionmental Microbiol. 73

      Pages: 2110-2117

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Direct access to the sub-vent biosphere by shallow drilling2007

    • Author(s)
      Ishibashi, J., K. Marumo, A. Maruyama, T. Urabe
    • Journal Title

      Oceanography 20,(1)

      Pages: 24-25

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Selective phylogenetic analysis targeting 16S rRNA genes of hyperthermophilic archea in the deep-subsurface hot biosphere2007

    • Author(s)
      Kimura, H., J.-I. Ishibashi, H. Masuda, K. Kato, S. Hanad
    • Journal Title

      Appl. Envion. Microbiol. 73

      Pages: 2110-2117

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Eruption of submarine volcanoes and hydrothermal activity (in Japanese)2007

    • Author(s)
      Urabe, T.
    • Journal Title

      Kagaku (Iwanami) 77

      Pages: 1297-1299

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Culture-dependent and-independent characterization of microbial communities associated with a shallow submarine hydrothermal system occurring within a coral reef off TaketomiIsland Japan2007

    • Author(s)
      Hirayama H., M. Sunamura, K. Takai, T. Nunoura, T. Noguchi, H. Oida, Y. Furushima, H. Yamamoto, T. Oomori, K. Horikoshi
    • Journal Title

      Applied and Enviromental Microbiology 73

      Pages: 7642-7656

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Food composition of crinoids (crinoidea : echinodermata) in relation to stalk length and fan density : their paleoecological implications2007

    • Author(s)
      Kitazawa, K, T. Oji, M. Sunamura
    • Journal Title

      Marine Biology 152

      Pages: 959-968

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] "Recycle Technology of Precious Metals and Rare Metals, An Overview (In Japanese; Book)2007

    • Author(s)
      Urabe, T.
    • Journal Title

      NTS Publ.

      Pages: 572-572

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] "Evolution of Planet Earth" (In Japanese, textbook)2007

    • Author(s)
      Matsumoto, R., Urabe, T., Tajika, E.
    • Journal Title

      The University of Air

      Pages: 254-254

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] CoZone Working Group "Continental Scientific Drilling; a decade of progress and challenges for the future."2007

    • Author(s)
      Behrmann, J. H., Yang, J.
    • Journal Title

      Springer, Heidelberg

      Pages: 289-334

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Direct access to the sub-vent biosphere by shallow drilling2007

    • Author(s)
      Ishibashi, J., K. Marumo, A. Maruyama, and T. Urabe
    • Journal Title

      Oceanography 20

      Pages: 24-25

    • Related Report
      2007 Annual Research Report 2006 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 海底火山の噴火と熱水活動2007

    • Author(s)
      浦辺 徹郎
    • Journal Title

      科学 77

      Pages: 1297-1299

    • Related Report
      2007 Annual Research Report
  • [Journal Article] Recharge/discharge interface of a secondary hydrothermal circulation in the Suiyo Seamount of the Izu-Bonin arc identified by submersible-operated heat flow measurements2006

    • Author(s)
      Kinoshita M, Kawada Y, Tanaka A, Urabe T
    • Journal Title

      Earth. Planet. Sci. Lett. 245

      Pages: 498-508

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] A digital imaging procedure for seven-probe-labeling FISH (Rainbow-FISH) and its application to estuarine microbial communities2006

    • Author(s)
      Sunamura M. and A. Maruyama
    • Journal Title

      FEMS Microbiology Ecology 55

      Pages: 159-166

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Expedition reveals changes in Lau Basin Hydrothermal System2006

    • Author(s)
      Ishibashi, J., J.E. Lupton, T. Yamaguchi, J.T. Nunomura, K. Takai
    • Journal Title

      EOS, Transactions AGU,87

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] A digital imaging procedure for seven-probe-labeling FISH (Rainbow-FIS and its application to microbial communities2006

    • Author(s)
      Sunamura M., A. Maruyama
    • Journal Title

      FEMS Microb. Ecol. 55

      Pages: 159-166

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Expedition reveals changes in Lau Basin Hydrothermal Syste2006

    • Author(s)
      Ishibashi, J., J. E. Lupton, T. Yamaguchi, J. T. Nunomura, K. Taka
    • Journal Title

      EOS Trans. 13

      Pages: 17-17

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Recharge/discharge interface of a secondary hydrothermal circulation in the Suiyo Seamount of the Izu-Bonin arc, identified by submersible-operated heat flow measurements2006

    • Author(s)
      Kinoshita M, Kawada Y, Tanaka A, Urabe T
    • Journal Title

      Earth. Planet. Science. Letters 245

      Pages: 498-508

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Recharge/discharge interface of a secondary hydro thermal circulation (2007). in the Suiyo Seamount of the Izu-Bonin arc

    • Author(s)
      Kinoshita M, Kawada Y, Tanaka A, Urabe T.
    • Journal Title

      Earth. Planet. Sci. Lett. 245

      Pages: 498-508

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] A digital imaging procedure for seven-probe-labeling FISH (Rainbow-FISH) and its application to estuarine microbial communities

    • Author(s)
      Sunamura M., A. Maruyama
    • Journal Title

      FEMS Microbiology Ecology 55

      Pages: 159-166

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] 「研究成果報告書概要(欧文)」より

    • Author(s)
      Suzuki, R., J-I. Ishibashi, M. Nakaseama, U. Konno, U. Tsunogai, K. Gena, H. Chiba
    • Journal Title

      Resource Geology (in press)

    • Related Report
      2007 Final Research Report Summary
  • [Presentation] 地熱坑井内からの試料直接採取による長野県小谷地域の地熱流体の地球化学的研究2008

    • Author(s)
      三好陽子・河村真吾・石橋純一郎・能登征美・岡部高志・佐藤真丈・砂村倫成・柳川勝紀・浦辺徹郎
    • Organizer
      地球惑星科学連合大会
    • Place of Presentation
      幕張メッセ
    • Year and Date
      2008-05-27
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Geochemical study of geothermal fluid collected with a high temperature borehole fluid sampler2008

    • Author(s)
      Miyoshi, Y.; Kawamura, Y.; Ishibashi, J.; Noto, M.; Okabe, T. Sato, M.; Sunamura, M.; Yanagawa, K.; Urabe, T.
    • Organizer
      Japan Geoscience Union Meeting
    • Place of Presentation
      Mauhari
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] The scientific results of the IODP Expedition 3012007

    • Author(s)
      Fisher, A.T., T. Urabe, A. Klaus, and the IODP Exp.301 Scientists
    • Organizer
      IODP-SPC Meeting
    • Place of Presentation
      Kyoto
    • Year and Date
      2007-10-15
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] A. Klaus, and the IODP Exp. 301 Scientists The scientific results of the IODP Expedition 3012007

    • Author(s)
      Fisher, A. T., T. Urabe
    • Organizer
      IODP-SPC Meeting
    • Place of Presentation
      Kyoto
    • Year and Date
      2007-10-15
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Sulfur isotopic variation and the growth mechanism of a large sulfide chimney from Izena Caldera2007

    • Author(s)
      Saito, M., T. Nogutchi, and T. Urabe
    • Organizer
      Soc. Resource Geol. Annual Mtg. Tokyo
    • Place of Presentation
      Central Okinawa Tough
    • Year and Date
      2007-06-20
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Sulfur isotopic variation and the growth mechanism of a large sulfide chimney from Izena Caldera2007

    • Author(s)
      Saito, M., T. Nogutchi, T. Urabe
    • Organizer
      Soc. Resource Geol. Annual
    • Place of Presentation
      Mtg. Tokyo
    • Year and Date
      2007-06-02
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] An Overview of the Archaean Park Project : Investigation of Sub-vent Biosphere through Aseptic Drilling into Arc and Backarc Volcanoes2007

    • Author(s)
      Urabe, T., N. Seama, K. Marumo, A. Maruyama, J. Ishibashi
    • Organizer
      Ridge 2000 Theoretical Institute
    • Place of Presentation
      California, USA.
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] An overview of seafloor hydrothermal activity in arc/backarc systems of the western Pacific,2006

    • Author(s)
      Urabe, T.
    • Organizer
      Intern. Mineralogical Assoc. Kobe 2006
    • Place of Presentation
      Kobe
    • Year and Date
      2006-07-25
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] An Overview of the Archaean Park Project: Investigation of Sub-vent Biosphere through Aseptic Drilling into Arc and Back arc Volcanoes2006

    • Author(s)
      Urabe, T., N. Seama, K. Marumo, A. Maruyama, and J. Ishibashi
    • Organizer
      Ridge 2000 Theoretical Institute 2006
    • Place of Presentation
      California, USA.
    • Year and Date
      2006-06-28
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Japan Drilling Earth Science Consortium(J-DESC)and Japanese Initial Science Plan for Continental Drilling2006

    • Author(s)
      Urabe, T
    • Organizer
      ICDP Ten Years After Symposium
    • Place of Presentation
      Potsdam, Germany
    • Year and Date
      2006-04-02
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] An overview of seafloor hydrothermal activity in arc/backarc systems 2007 of the western Pacific

    • Author(s)
      Urabe, T.
    • Organizer
      Intern. Mineralogical Assoc.
    • Place of Presentation
      Kobe
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Japan Drilling Earth Science Consortium (J-DESC) and Japanese Initial Science Plan for Continental Drilling

    • Author(s)
      Urabe, T.
    • Organizer
      ICDP Ten Years After Symposium
    • Place of Presentation
      potsdam, Germany
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] 貴金属・レアメタルのリサイクル技術集成2007

    • Author(s)
      浦辺徹郎(共著)
    • Total Pages
      571
    • Publisher
      NTS社
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] 「惑星地球の進化」2007

    • Author(s)
      松本良・浦辺徹郎・田近英一
    • Total Pages
      254
    • Publisher
      放送大学
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] Continental Scientific Drilling; a decade of progress and challenges for the future.2007

    • Author(s)
      Behrmann, J. H., Yang, J. & CoZone Working Group
    • Publisher
      Springer, Heidelberg
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] 総論:希少金属材料の資源問題と我が国の戦略2007

    • Author(s)
      浦辺 徹郎, ほか
    • Total Pages
      571
    • Publisher
      ブッカーズ社編「貴金属・レアメタルのリサイクル技術集成」
    • Related Report
      2007 Annual Research Report
  • [Book] 惑星地球の進化2007

    • Author(s)
      松本 良・浦辺 徹郎・田近 英一
    • Total Pages
      254
    • Publisher
      放送大学
    • Related Report
      2007 Annual Research Report
  • [Book] Continental Scientific Drilling:a decade of progress and challenger for the future2007

    • Author(s)
      Behrmann, J.H., Yang, J. & CoZone Working Group
    • Publisher
      Springer, Heidelberg
    • Related Report
      2007 Annual Research Report
  • [Book] 「惑星地球の進化」2007

    • Author(s)
      松本良・浦辺徹郎・田近英一
    • Publisher
      放送大学学園
    • Related Report
      2006 Annual Research Report

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Published: 2006-04-01   Modified: 2016-04-21  

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