Polymorphisms of genes for visual pigments in guppies : with relation to variation of female choice

• Project/Area Number: 18370009
• Research Category: Grant-in-Aid for Scientific Research (B)
• Allocation Type: Single-year Grants
• Section: 一般
• Research Field: Ecology/Environment
• Research Institution: Tohoku University
• Principal Investigator: KAWATA Masakado Tohoku University, 大学院・生命科学研究科, 教授 (90204734)
• Co-Investigator(Kenkyū-buntansha): KAWAMURA Shoji 東京大学, 新領域創成科学研究科, 准教授 (40282727) ; YOKOYAMA Jun 東北大学, 大学院・生命科学研究科, 助手 (80272011)
• Co-Investigator(Renkei-kenkyūsha): KAWAMURA Shoji 東京大学, 新領域創成科学研究科, 准教授 (40282727) ; YOKOYAMA Jun 山形大学, 理学部, 准教授 (80272011)
• Project Period (FY): 2006 – 2008
• Project Status: Completed (Fiscal Year 2008)
• Budget Amount: ¥17,610,000 (Direct Cost: ¥15,000,000、Indirect Cost: ¥2,610,000); Fiscal Year 2008: ¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000); Fiscal Year 2007: ¥5,720,000 (Direct Cost: ¥4,400,000、Indirect Cost: ¥1,320,000); Fiscal Year 2006: ¥6,300,000 (Direct Cost: ¥6,300,000)
• Keywords: 色覚遺伝子 / 遺伝的多様性 / 多型維持 / 性選択 / グッピー / 自然選択 / オプシン遺伝子 / 進化 / 生態学 / 視覚感受性

Research Abstract

本研究では、グッピー(Poecilia reticulata)の赤型オプシン遺伝子の維持気候の解明に向けて研究を行った。この研究によってグッピーの視物質遺伝子をすべて同定し、LWS-B, C. D以外の吸収波長を特定した。さらに、沖縄に生息する移入個体を用いて、光感受性を調べる行動実験を行い、LWS-BとLWS-Cから同定できる遺伝子型の違いが緑波長領域の感受性の違いに影響を与えていることが示された。また、グッピー原産地のトリニダッド2集団の個体をLWS-BとLWS-Aの配列を決定し、集団遺伝的解析を行った、Aripo川下流の集団でLWS-Bに関して平衡選択の可能性が示唆された。

Research Products

• [Journal Article] Genetic structure of island populations of the end- angered bat Hipposiderosturpis : Implications for conservation (2009)
  • Author(s): Echenique-Diaz, L. M, J. Yokoyama, O. Takahashi, and M. Kawata
  • Journal Title: Population Ecology 15 Pages: 153-160
  • Peer Reviewed
• [Journal Article] Genetic and acoustic population structuring in the Okinawa Least Horsehoe bat : inter-colony acoustic differences maintained by vertical maternaltransmission- (2008)
  • Author(s): Yoshino, H., K. Armstrong, M. Izawa, J. Yokoyama, and M. Kawata
  • Journal Title: Molecular Ecology 17 Pages: 4978-4991
  • Peer Reviewed
• [Journal Article] Nitric Oxide Synthase(NOS)in the Japanese fireflies, Luciola lateralis and Luciola cruciata (2008)
  • Author(s): Ohtsuki, H., J. Yokoyama, N. Ohba, Y. Ohmiya and M. Kawata
  • Journal Title: Archives of Insect Biochemistry and Physology 69 Pages: 176-188
  • Peer Reviewed
• [Journal Article] Identification of cis-acting elements repressing blue opsin expression in zebrafish UV cones and pineal cells (2008)
  • Author(s): Takechi, M., Seno, S. and Kawamura, S
  • Journal Title: The Journal of Biological Chemistry 283 Pages: 31625-31632
  • Peer Reviewed
• [Journal Article] Importance of achromatic contrast in short-range fruit foraging of primates (2008)
  • Author(s): Hiramatsu1, C., Melin, A. D., Aureli, F., Schaffner, C. M., Vorobyev, M., Matsumoto, Y. and Kawamura, S
  • Journal Title: PLoS ONE 3
  • Peer Reviewed
• [Journal Article] Assembly of the cnidarian camera-type eye from vertebrate-like components (2008)
  • Author(s): Kozmik, Z., Ruzickova, J., Jonasova, K., Matsumoto, Y., Vopalensky, P., Kozmikova, I., Strnad, H., Kawamura, S., *Piatigorsky, J., Paces, V. and *Cestmir, V
  • Journal Title: Proceedings of the National Academy of Sciences USA 105 Pages: 8989-8993
  • Peer Reviewed
• [Journal Article] Polymorphic color vision in white-faced capuchins(Cebus capucinus) : Is there foraging niche divergence among phenotypes? (2008)
  • Author(s): Melin, A. D., Fedigan, L. M., Hiramatsu, C. and Kawamura, S
  • Journal Title: Behavioral Ecology and Sociobiology 62 Pages: 659-670
  • Peer Reviewed
• [Journal Article] Rescue from oculocutaneous albinism type 4 using medaka slc45a2 cDNA driven by its own promoter (2008)
  • Author(s): Fukamachi, S., Kinoshita, M., Tsujimura, T., Shimada, A., Oda, S., Shima, A., Meyer, A., Kawamura, S. and Mitani, H
  • Journal Title: Genetics 178 Pages: 761-769
  • Peer Reviewed
• [Journal Article] Effects of an alien bumblebee on native plant reproduction through competitive interactions with native bumblebees (2008)
  • Author(s): Dohzono, I., Kawate Kunitake, Y., Yokoyama, J., Goka, K
  • Journal Title: Ecology 89 Pages: 3082-3092
  • Peer Reviewed
• [Journal Article] Morphological aspects and phylogenetic analyses of pollination systems in Tylophora-Vincetoxicum complex(Apocynaceae-Asclepiadaceae)in Japan (2008)
  • Author(s): Yamashiro, T., Yokoyama, J., Maki, M
  • Journal Title: Biological Journal of the Linnean Society 93 Pages: 325-341
  • Peer Reviewed
• [Journal Article] Nitric Oxide Synthase (NOS) in the Japanese fireflies, Luciola lateralis and Luciola cruciata (2008)
  • Author(s): Ohtsuki, H., J. Yokoyama, N. Ohba, Y. Ohmiva and M. Kawata
  • Journal Title: Archives of Insect Biochemistry and Physiology 69 Pages: 176-188
  • Peer Reviewed
• [Journal Article] Genetic and acoustic population structuring in the Okinawa Least Horsehoe bat : inter-colony acoustic differnces maintained by vertical maternal transmission (2008)
  • Author(s): Yoshino, H., K. Armstrong, M. Izawa, J. Yokoyama, and M. Kawata
  • Journal Title: Molecular Ecology 17 Pages: 4978-4991
  • Peer Reviewed
• [Journal Article] Genetic structure of island populations of the endangered bat Hipposideros turpis : Implications for conservation (2008)
  • Author(s): Echenique-Diaz, L. M, J. Yokoyama, O. Takahashi, and M. Kawata
  • Journal Title: Population Ecology 17 Pages: 4978-4991
  • Peer Reviewed
• [Journal Article] A genetically explicit model of speciation by sensory drive within a con-tinuous population in aquatic environments (2007)
  • Author(s): Kawata, M., Shoji, A. ,Kawamura, S. and O. Seehausen
  • Journal Title: BMC Evolutionary Biology 7 Pages: 99-99
  • Peer Reviewed
• [Journal Article] Relative resource abundance explains butterfly biodiversity in island communities (2007)
  • Author(s): Yamamoto, N., Yokoyama, J. and M. Kawata
  • Journal Title: Proceedings of the National Academy of Sciences USA 104 Pages: 10524-10529
  • Peer Reviewed
• [Journal Article] Role of the 5--> 3 exonuclease and Klenow fragment of Escherichia coli DNA polymerase I in base mismatch repair (2007)
  • Author(s): Imai, M., Y.I. Tago, M. Ihara, M. Kawata, Yamamoto K
  • Journal Title: Molecular Genetics and Genomics 278 Pages: 211-220
  • Peer Reviewed
• [Journal Article] Molecular phylogeny and genetic divergence of the introduced populations of Japanese guppies, Poecilia reticulata (2007)
  • Author(s): Shoji, A., J. Yokoyama and M. Kawata
  • Journal Title: Conservation Genetics 8 Pages: 267-271
  • Peer Reviewed
• [Journal Article] Effects of temporal and spatial heterogeneities created by consumer-driven nutrient recycling on algal diversity (2007)
  • Author(s): Kato, S., Urabe, J. and M. Kawata
  • Journal Title: Journal of Theoretical Biology 254 Pages: 364-377
  • Peer Reviewed
• [Journal Article] Identification of a locus control region for quadruplicated green-sensitive opsin genes in zebrafish (2007)
  • Author(s): Tsujimura, T., Chinen, A. and Kawamura, S
  • Journal Title: Proceedings of the National Academy of Sciences USA 104 Pages: 12813-12818
  • Peer Reviewed
• [Journal Article] Effects of colour vision phenotype on insect capture by a free-ranging population of white-faced capuchins (Cebus capucinus) (2007)
  • Author(s): Melin, A. D., Fedigan, L. M., Hiramatsu, C., Sendall, C. and Kawamura, S
  • Journal Title: Animal Behaviour 73 Pages: 205-214
  • Peer Reviewed
• [Journal Article] Reticulate evolution and phylogeography in Asarum sect. Asiasarum(Aristolochiaceae)documented in internal transcribed spacer sequences(ITS)of nuclear ribosomal DNA (2007)
  • Author(s): Yamaji, H., Fukuda, T., Yokoyama, J., Pak, J.-H., Zhou, C.-Z., Yang, C.-S., Kondo, K., Morota, T., Takeda, S., Sasaki, H., Maki, M
  • Journal Title: Molecular Phylogenetics and Evolution 44 Pages: 863-884
  • Peer Reviewed
• [Journal Article] A genetically explicit model of speciation by sensory drive within a continuous population in aquatic environments (2007)
  • Author(s): Kawata, M., Shoji, A., Kawamura, S. and O. Seehause
  • Journal Title: BMC Evolutionary Biology 7
  • Peer Reviewed
• [Journal Article] Relative resource abundance explains butterfly biodiversity in island communities (2007)
  • Author(s): Yamamoto, N., Yokoyama, J. and M. Kawata
  • Journal Title: Proceedings of the National Academy of Sciences of the United States of America 104 Pages: 10524-10529
  • Peer Reviewed
• [Journal Article] Identification of a locus control region for quadruplicated green-sensitive opsin genes in zebrafish (2007)
  • Author(s): Tsujimura, T., Chinen, A. ahd Kawamura, S.
  • Journal Title: Proceedings of the National Academy of Sciences of the United States of Americ 104 Pages: 12813-12818
  • Peer Reviewed
• [Journal Article] Molecular phylogeny and genetic divergence of the introduced populations of Japanese guppies, Poecilia reticulata. (2007)
  • Author(s): Shoji, A., J.Yokoyama, M.Kawata
  • Journal Title: Conservation Genetics 8 Pages: 267-271
• [Journal Article] Genital lock-and-key system and premating isolation by mate preference in carabid beetles(Carabus subgenus Ohomopterus) (2006)
  • Author(s): Usami, T., J. Yokoyama, K. Kubota and M. Kawata
  • Journal Title: Biological Journal of Linnean Society 87 Pages: 145-154
  • Peer Reviewed
• [Journal Article] Impact of ancestral populations on postzygotic isolation in allopatric speciation (2006)
  • Author(s): Hayashi, I.T. and M. Kawata
  • Journal Title: Population Ecology 48 Pages: 121-13
  • NAID: 10018121529
  • Peer Reviewed
• [Journal Article] Nok plays an essential role in maintaining the integrity of the outer nuclear layer in the zebrafish retina (2006)
  • Author(s): Wei, X., Zou, J., Takechi, M., Kawamura, S. and Li, L
  • Journal Title: Experimental Eye Research 83 Pages: 31-44
  • Peer Reviewed
• [Journal Article] Functional character- ization of visual opsin repertoire in Medaka(Oryzias latipes) (2006)
  • Author(s): Matsumoto, Y., Fukamachi, S., Mitani, H. and Kawamura, S
  • Journal Title: Gene 371 Pages: 268-278
  • Peer Reviewed
• [Journal Article] Spatiotemporal expression of duplicate AGAMOUS orthologues during floral development (2006)
  • Author(s): Song, I.-J, Nakamura, T., Fukuda, T., Yokoyama, J., Ito, T., Ichikawa, H., Horikawa, Y., Kameya, T., Kanno, A
  • Journal Title: Phalaenopsis. Development, Genes and Evolution 216 Pages: 301-313
  • Peer Reviewed
• [Journal Article] Impact of ancestral populations on postzygotic isolation in allopatric speciation (2006)
  • Author(s): Hayashi, I.T., M.Kawata
  • Journal Title: Population Ecology 48 Pages: 121-130
  • NAID: 10018121529
• [Presentation] グッピ-の色覚の多様性の維持機構の解明 (2009)
  • Author(s): 手塚あゆみ, 笠木聡, 河村正二, Cock van Oosterhout, 河田雅圭
  • Organizer: 第56回日本生態学会
  • Place of Presentation: 岩手県立大学
  • Year and Date: 2009-03-18
• [Presentation] グッピー(Poecilia reticulata)におけるLWS オプシン遺伝子が個体の光感受性に与える影響 (2009)
  • Author(s): 村田和人, 笠木聡, 河村正二, 松島野枝, 河田雅圭
  • Organizer: 第56回日本生態学会
  • Place of Presentation: 岩手県立大学
  • Year and Date: 2009-03-18
• [Presentation] グッピーの色覚の多様性の維持機構の解明 (2009)
  • Author(s): 手塚あゆみ, 笠木聡, 河村正二, Cockvan Oosterhout, 松島野枝, 河田雅圭
  • Organizer: 日本生態学会
  • Place of Presentation: 岩手県立大学
  • Year and Date: 2009-03-18
• [Presentation] 地球環境変化と進化学, 地球温暖化による生物進化と生物多様性の変化 (2008)
  • Author(s): 河田雅圭
  • Organizer: 日本進化学会, 第10回東京大会
  • Place of Presentation: 東京大学
  • Year and Date: 2008-08-24
• [Presentation] 祖先配列推定によるオプシン吸収波長の進化的推移の復元 (2008)
  • Author(s): 河村正二, 松本圭史, 知念秋人
  • Organizer: 第10回日本進化学会
  • Place of Presentation: 東京大学
  • Year and Date: 2008-08-23
• [Presentation] グッピー(Poecilia reticulata)における LWSオプシン遺伝子座の多型維持機構 (2008)
  • Author(s): 手塚あゆみ, 笠木聡, 河村正二, C. van Oosterhout, 河田雅圭
  • Organizer: 日本進化学会, 第10回東京大会
  • Place of Presentation: 東京大学
  • Year and Date: 2008-08-23
• [Presentation] How genomic studies promote understanding of speciation mechanisms (2008)
  • Author(s): Kawata, M.
  • Organizer: 日本生態学会
  • Place of Presentation: 福岡
  • Year and Date: 2008-03-17
• [Presentation] How genomic studies promote understanding of speciation mechanisms (2008)
  • Author(s): Kawata, M
  • Organizer: 第55回日本生態学会
  • Place of Presentation: 福岡
  • Year and Date: 2008-03-14
• [Presentation] グッピーの体色とメラニン生合成に関わる遺伝子の関連性 (2008)
  • Author(s): 手塚あゆみ, 河田雅圭
  • Organizer: 第55回日本生態学会
  • Place of Presentation: 福岡
  • Year and Date: 2008-03-14
• [Presentation] Evolutionary diversification of visual opsin subtypes in fish and primates : spectral differentiation, expression patterning and natural selection. The Asia-Pacific Conference on Vision(APCV 2008) (2008)
  • Author(s): Kawamura, S
  • Organizer: Comparative Colour Vision, Brisbane Convention Centre
  • Place of Presentation: Brisbane, Australia
• [Book] 生物群集を形作る進化の歴史,『シリーズ群集生態学(2)進化生物学からせまる』 (2009)
  • Author(s): 河田雅圭, 千葉聡
  • Publisher: 京都大学出版会
• [Book] 個体の行動の進化、『シリーズ進化学6, 行動・生態の進化』 (2006)
  • Author(s): 河田雅圭
  • Publisher: 岩波書店