• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Discovery of amino acid amide racemase and its use in the dynamic kinetic resolution of amino acid amides

Research Project

Project/Area Number 18380061
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied microbiology
Research InstitutionToyama Prefectural University

Principal Investigator

ASANO Yasuhisa  Toyama Prefectural University, Department of Biotechnology, Professor (00222589)

Co-Investigator(Kenkyū-buntansha) KOMEDA Hidenobu  Toyama Prefectural University, Faculty of Engineering, Lecturer (50285160)
YAMANE Takashi  Nagoya University, Faculty of Engineering, Professor (80030055)
Project Period (FY) 2006 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥12,650,000 (Direct Cost: ¥11,300,000、Indirect Cost: ¥1,350,000)
Fiscal Year 2007: ¥5,850,000 (Direct Cost: ¥4,500,000、Indirect Cost: ¥1,350,000)
Fiscal Year 2006: ¥6,800,000 (Direct Cost: ¥6,800,000)
Keywordsamino acid amide / racemase / amidase / D-aminooeptidase / aloha-amino-ensilon-canrolactam racemase / D-amino acid
Research Abstract

1. Amino acid amide racemizing activity was discovered in alpha-amino-epsilon-caprolactam (ACL) racemase from Achromobacter obae.
2. Amino acid amidases acting for various amino mid amides, such as D-aminopeptidase (DAP), D-amino acid amidase (DAA), were isolated from various microbial sources, their primary structures deduced and expression in E. coli were made possible.
3. The enzymatic synthesis of D-alanin from L-alanine amide has been demonstrated by use of D-aminopeptidase (DAP) from Ochrobactrum anthropi C1-38 and ACL racemase. The result of successive enzymatic reaction shows that the combination of ACL racemase and DAP can be applied for dynamic kinetic resolution of DL-amino acid amides to yield D-amino acids.
4. Structure of DAA and directed evolution of ACL racemase: We developed a colorimetric method to measure the activity of ACL racemase with stereospecific amino acid amidase and amino acid oxidase, and 4-aminoantipyrine. The structure of D-amino acid amidase from Ochrobactrum anthropiSV3 was solved at 2.1A resolution.

Report

(3 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • Research Products

    (40 results)

All 2008 2007 2006 Other

All Journal Article (20 results) (of which Peer Reviewed: 8 results) Presentation (15 results) Book (3 results) Remarks (2 results)

  • [Journal Article] Crystal structures of D-amino acid amidase complexed with L-phenylalanine and with L-phenylalanine amide Insight into D-stereospecificity of D-amino acid amidase from Ochrobactrum anthropi SV32008

    • Author(s)
      Seiji Okazaki, Atsuo Suzuki, Tsunehiro Mizushima, Hidenobu Komeda, Yasuhisa Asano, Takashi Yamane
    • Journal Title

      Acta Cryst D64

      Pages: 331-334

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Crystal structures of D-amino acid amidase complexed with L-phenylalanine and with L-phenylalanine amide: Insight into D-stereospecificity of D-amino acid amidase from Ochrobactrum anthropi SV32008

    • Author(s)
      Seiji, Okazaki, Atsuo, Suzuki, Tsunehiro, Mizushima, Hidenobu, Komeda, Yasuhisa, Asano, Takashi, Yamane
    • Journal Title

      Acta Cryst D64

      Pages: 331-334

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Crystal structures of D-amino acid amidase complexed with L-phenylalanine and with L-phenylalanine amide: Insight into D-stereospecificity of D-amino acid amidase from Ochrobactrum anthropi SV32008

    • Author(s)
      Seiji Okazaki, Atsuo Suzuki, Tsunehiro Mizushima, Hidenobu Komeda, Yasuhisa Asano, Takashi Yamane
    • Journal Title

      Acta Cryst, D64

      Pages: 331-334

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] New enzymatic method of chiral amino acid synthesis bydynamic kinetic resolution of amino acid amides Use ofstereoselective amino acid amidases in the presence ofa-amino-s-caprolactam racemase2007

    • Author(s)
      Shigenori Yamaguchi, Hidenobu Komeda, and Yasuhisa Asano
    • Journal Title

      Appl.En viron.Microbiol 73(16)

      Pages: 5370-5373

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Crystal structure and function of a D-stereospecific amino acid amidase from Ochrobactrum anthropi SV3,a new member of the penicillin-recognizing proteins2007

    • Author(s)
      Seiji Okazaki, Atsuo Suzuki, Hidenobu Komeda, Shigenori Yamaguchi, Yasuhisa Asano, and Takashi Yamane
    • Journal Title

      J.Mol.Biol 368(1)

      Pages: 79-91

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] アミノ酸アミドラセマーゼ活性の発見とアミノ酸アミドのダイナミックな光学分割2007

    • Author(s)
      浅野 泰久
    • Journal Title

      ファインケミカル 36(5)

      Pages: 8-15

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Enzymes acting on D-amino acid amides, R. Konno, H.Brueckner, A.D'Aniello, G.Fisher, N. Fujii, and H.Homma (eds.).In DAminoacids:A new frontier2007

    • Author(s)
      Yasuhisa Asano
    • Journal Title

      amino acid and protein research practicalmethods and protocols-, Hauppauge, New York, U.S.A, Nova Science Publishers

      Pages: 579-589

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] New enzymatic method of chiral amino acid synthesis by dynamic kinetic resolution of amino acid amides: Use of stereoselective amino acid amidases in the presence of α-amino-ε-caprolactam racemase2007

    • Author(s)
      Shigenori, Yamaguchi, Hidenobu, Komeda, Yasuhisa, Asano
    • Journal Title

      Appl. Environ. Microbial 73(16)

      Pages: 5370-5373

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Crystal structure and function of a D-stereospecific amino acid amidase from Ochrobactrum anthropi SV3, a new member of the penicillin-recognizing proteins2007

    • Author(s)
      Seiji, Okazaki, Atsuo, Suzuki, Hidenobu, Komeda, Shigenori, Yamaguchi, Yasuhisa, Asano, Takashi, Yamane
    • Journal Title

      J. Mol. Biol 368(1)

      Pages: 79-91

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Discovery of amino acid racemase activity and its use in the dynamic kinetic resolution of amino acid amides Book2007

    • Author(s)
      Yasuhisa, Asano
    • Journal Title

      Fine Chemicals 36(5)(in Japanese)

      Pages: 52-59

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] New enzymatic method of chiral amino acid synthesis by dynamic kinetic resolution of amino acid amides: Use of stereoselective amino acid amidases in the presence of α-amino-ε-caprolactam racemase2007

    • Author(s)
      Shigenori Yamaguchi, Hidenobu Komeda, and Yasuhisa Asano
    • Journal Title

      Appl. Environ. Microbiol. 73(16)

      Pages: 5370-5373

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Crystal structure and function of a D-stereospecific amino acid amidase from Ochrobactrum anthropi SV3, a new member of the penicillin-recognizing proteins2007

    • Author(s)
      Seiji Okazaki, Atsuo Suzuki, Hidenobu Komeda, Shigenori Yamaguchi, Yasuhisa Asano, and Takashi Yamane
    • Journal Title

      J. Mol. Biol. 368(1)

      Pages: 79-91

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Crystal structure and Functional Characterization of a D-stereospecific amino acid amidase from Ochrobactrum anthropi SV3, a new member of the penicillin-recognizing proteins2007

    • Author(s)
      S.Okazaki, A.Suzuki, H.Komeda, Y.Asano, T.Yamane
    • Journal Title

      J. Mol. Biol. 368(1)

      Pages: 79-91

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Glycosidation of L-phenylalanine dehydrogenase with O-carboxymethyl-poly-β-cyclodextrin2007

    • Author(s)
      R.Villalonga, S.Tachibana, R.Cao, M.Matos, Y.Asano
    • Journal Title

      Enzyme Microb. Technol. 40(3)

      Pages: 471-475

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Structural-based engineering for transferases to improve the industrial production of 5'-nucleotide2007

    • Author(s)
      Y.Asano, et al.
    • Journal Title

      Bull. Chem. Soc. Jpn. 80(2)

      Pages: 276-286

    • NAID

      10018517804

    • Related Report
      2006 Annual Research Report
  • [Journal Article] L-Stereoselective amino-acid amidase with broad substrate specificity from Brevundimonas diminuta: A new member of the leucine aminopeptidase family2006

    • Author(s)
      H.Komeda, N.Hariyama, and Y.Asano
    • Journal Title

      J Appl.Microbial.Biotechnol 70(4)

      Pages: 412-421

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] L-Stereoselective amino-acid amidase with broad substrate specificity from Brevundimonas diminuta: A new member of the leucine aminopeptidase family2006

    • Author(s)
      Komeda, H, Hariyama, N, Asano, Y
    • Journal Title

      Appl. Microbio" Biotechnol 70(4)

      Pages: 412-421

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Systematic regulation of the enzymatic activity of phenylacetaldoxime dehydratase by exogenous ligands2006

    • Author(s)
      Y.Asano, et al.
    • Journal Title

      Chembiochem. 7(12)

      Pages: 2004-2009

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Application of an enzyme chip to the microquantification of L-phenylalanine2006

    • Author(s)
      S.Tachibana, M.Suzuki, Y.Asano
    • Journal Title

      Anal. Biochem. 359(1)

      Pages: 72-78

    • Related Report
      2006 Annual Research Report
  • [Journal Article] L-Stereoselective amino-acid amidase with broad substrate specificity from Brevundimonas diminuta : A new member of the leucine aminopeptidase family2006

    • Author(s)
      H.Komeda, N.Hariyama, Y.Asano
    • Journal Title

      Appl. Microbiol Biotechnol. 70(4)

      Pages: 412-421

    • Related Report
      2006 Annual Research Report
  • [Presentation] 新しい酵素機能の開拓と産業利用に関する研究2008

    • Author(s)
      浅野 泰久
    • Organizer
      2008年農芸化学会大会(日本農芸化学会賞受賞講演)
    • Place of Presentation
      名古屋
    • Year and Date
      2008-03-26
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] Development of new enzymatic functions and their industrial uses2008

    • Author(s)
      Yasuhisa, Asano
    • Organizer
      2008 Japan Society for Bioscience, Biotechnology, and Agrochemistry
    • Place of Presentation
      Nagoya
    • Year and Date
      2008-03-26
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] ダイナミックな光学分割によるアミノニトリルおよびアミノ酸アミドからの光学活性アミノ酸の合成2007

    • Author(s)
      浅野 泰久
    • Organizer
      第30回日本分子生物学会・第80回生化学会大会合同大会
    • Place of Presentation
      横浜
    • Year and Date
      2007-12-11
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] Synthesis of optically active amino acids from aminonitrile or amino acid amide by dynamic kinetic resolution2007

    • Author(s)
      Yasuhisa, Asano
    • Organizer
      30the Japanese Society of Molecular Biology and 80th Japanese Society of Biochemistry
    • Place of Presentation
      Yokohama
    • Year and Date
      2007-12-11
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] The enzymatic conversion:environmentally benign way replacing some of already established chemical processes2007

    • Author(s)
      Yasuhisa Asano
    • Organizer
      International Conference on Biorefinery
    • Place of Presentation
      Beijing,China
    • Year and Date
      2007-10-21
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] The enzymatic conversion:environmentally benign way replacing some of already established chemical processes2007

    • Author(s)
      Yasuhisa, Asano
    • Organizer
      International Conference on Biorefinery
    • Place of Presentation
      Beijing, China
    • Year and Date
      2007-10-21
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] The enzymatic conversion: environmentally benign way replacing some of already established chemical processes2007

    • Author(s)
      Yasuhisa Asano
    • Organizer
      International Conference on Biorefinery
    • Place of Presentation
      Beijing, China
    • Year and Date
      2007-10-21
    • Related Report
      2007 Annual Research Report
  • [Presentation] α-アミノニトリルから光学活性アミノ酸へのダイナミックな光学分割法2007

    • Author(s)
      安川 和志、長谷見 隆司、米田 英伸、浅野 泰久
    • Organizer
      第3回D・アミノ酸研究会学術講演会
    • Place of Presentation
      徳島
    • Year and Date
      2007-09-15
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Dynamic kinetic resolution of a-aminonitrile to form optically active amino acids2007

    • Author(s)
      K. Yasukasa, R. Hasegawa, H. Komeda, Y. Asano
    • Organizer
      The third Conference on D-amino acids
    • Place of Presentation
      Tokushima
    • Year and Date
      2007-09-15
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] α-アミノニトリルから光学活性アミノ酸へのダイナミックな光学分割法2007

    • Author(s)
      長谷見隆司、米田英伸、浅野泰久
    • Organizer
      第3回D-アミノ酸研究会学術講演会
    • Place of Presentation
      徳島
    • Year and Date
      2007-09-15
    • Related Report
      2007 Annual Research Report
  • [Presentation] Crystal structure of D-stereospecific amino acid amidase from Ochrobactrum anthropi SV3; insight of D-stereospecificity and reaction mechanism2007

    • Author(s)
      S.Okazaki, A.Suzuki, T.Mizushima, H.Komeda, Y.Asano, and T.Tamane
    • Organizer
      The 2nd International symposium on diffraction structural biology
    • Place of Presentation
      東京
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] Crystal structure of D-amino acid amidase from Ochrobactru m anthropi SV3 and a- amino- e-caprolactam racemase from Achromobacter obae2007

    • Author(s)
      S.Okazaki, A.Suzuki, T.Mizushima, H.Komeda, Y Asano, and T.Tamane
    • Organizer
      The 8th Conference of the Asian Crystallo graphic Association
    • Place of Presentation
      Taipei,Taiwan
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Crystal structure of D-tereospecific amino acid amidase from Ochrobactrum anthropi SV3; insight of D-stereospecificity and reaction mechanism2007

    • Author(s)
      S. Okazaki, A. Suzuki, T. Mizushima, H. Komeda, Y. Asano, T. Tamane
    • Organizer
      The 2nd International symposium on diffraction structural biology
    • Place of Presentation
      Tokyo
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Crystal structure of D-amino acid amidase from Ochrobactrum anthropi SV3 and α-amino-ε-caprolactam racemase from Achromobacter obae2007

    • Author(s)
      S. Okazaki, A. Suzuki, T. Mizushima, H. Komeda, Y. Asano, T. Tamane
    • Organizer
      The 8th Conference of the Asian Crystallographic Association
    • Place of Presentation
      Taipei, Taiwan
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Crystal structure of D-amino acid amidase from Ochrobactrum anthropi SV3 and α-amino-ε-caprolactam racemase from Achromobacter obae2007

    • Author(s)
      S. Okazaki, A. Suzuki, T. Mizushima, H. Komeda, Y. Asano, and T. Tamane
    • Organizer
      The 8th Conference of the Asian Crystallo graphic Association
    • Place of Presentation
      Taipei, Taiwan
    • Related Report
      2007 Annual Research Report
  • [Book] Enzymes acting on D-amino acid amides, R. Konno, H.Brueckner, A.D'Aniello, G.Fisher, N. Fujii, and H.Homma (eds.).In DAminoacids:A new frontier in amino acid and protein research practicalmethods and protocols-, Hauppauge, New York, U.S.A,2007

    • Author(s)
      Yasuhisa Asano
    • Publisher
      Nova Science Publishers
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] R. Konno, H. Brueckner, A. D'Aniello, G. Fisher, N. Fujii, H. Homma2007

    • Author(s)
      Yasuhisa, Asano
    • Publisher
      In D-Amino acids: A new frontier in amino acid and protein research practical methods and protocols-, Hauppauge, New York, U.S.A.
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] Enzymes acting on D-amino acid amides, R. Konno, H. Brueckner, A. D'Aniello, G. Fisher, N. Fujii, and H. Homma(eds.). In D-Amino acids: A new frontier in amino acid and protein research-practical methods and protocols^-, Hauppauge, New York, U.S.A2007

    • Author(s)
      Yasuhisa Asano
    • Publisher
      Nova Science Publishers
    • Related Report
      2007 Annual Research Report
  • [Remarks] 「研究成果報告書概要(和文)」より

    • URL

      http://www.pu-toyama.ac.jp/BR/asano/homepage.html

    • Related Report
      2007 Final Research Report Summary
  • [Remarks]

    • URL

      http://www.pu-toyama.ac.jp/BR/asano/homepage.html

    • Related Report
      2007 Annual Research Report

URL: 

Published: 2006-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi