• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Functional analysis on sex-chromosome genes in haploid organism

Research Project

Project/Area Number 18510169
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 基礎ゲノム科学
Research InstitutionKyoto University

Principal Investigator

YAMATO Katsuyuki  Kyoto University, Graduate School of Biostudies, Instructor (50293915)

Co-Investigator(Kenkyū-buntansha) KOHCHI Takayuki  Kyoto University, Graduate School of Biostudies, Professor (40202056)
FUKUZAWA Hideya  Kyoto University, Graduate School of Biostudies, Associate professor (30183924)
Project Period (FY) 2006 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥4,120,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥420,000)
Fiscal Year 2007: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2006: ¥2,300,000 (Direct Cost: ¥2,300,000)
Keywordssex chromosomes / haploid / reproduction / evolution / bryophytes
Research Abstract

On the Y chromosome of the liverwort, Marchantia polymorpha L., 64 genes are identified, 14 of which are detected only in the male genome. These 14 genes are expressed in reproductive organs but not in vegetative thalli, suggesting their participation in male reproductive functions. The aim of this project is to prove this hypothesis.
For all but one of the 14 genes, cDNA sequences were determined by RACE, and their promoter regions were predicted by comparing the cDNA sequences and genomic sequences. To facilitate transgenic analyses, we have developed a rapid Agrobacterium-mediated transformation system for M. polymorpha using immature thalli developed from spores (Ishizaki, et. al., submitted). First, the M350E4.4 gene, which encodes F-box protein related to Arabidopsis UFO, was selected as a model case. To examine its expression pattern, a construct which carries the predicted promoter region of M350E4.4 and the β -glucuronidase gene (GUS) was introduced to immature thalli. No GUS activity was detected in transgenic thalli, which is consistent with our previous result of RT-PCR. Expression of 3135054.4 in sexual organ is under investigation. Four types of constructs were tested to examine the function of M350E4.4: (1) ectopic expression by CaMV35S promoter, (2) silencing by expressing dsRNA, (3) overexpression of F-box domain, and (4) overexpression of the coding sequence without F-box domain. Thalli of transgenic plants examined thus far were morphologically indistinguishable from wild-type. Morphology of sexual organ of transgenic plants are being investigated.

Report

(3 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • Research Products

    (17 results)

All 2008 2007 2006

All Journal Article (3 results) (of which Peer Reviewed: 1 results) Presentation (14 results)

  • [Journal Article] Gene organization of the liverwort Y chromosome reveals distinct sex chromosome evolution in a haploid system2007

    • Author(s)
      Yamato, K. T., et. al.
    • Journal Title

      Proc. Natl. Acad. Sci. 104

      Pages: 6472-6477

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Gene organization of the liverwort Y chromosome reveals distinct sex chromosome evolution in a haploid system2007

    • Author(s)
      Yamato, KT., et. al.
    • Journal Title

      Proc. Natl. Acad. Sci 104

      Pages: 6472-6477

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Gene organization of the liverwort Y chromosome reveals distinct sex chromosome evolution in a haploid system2007

    • Author(s)
      Yamato, K.T. et al.
    • Journal Title

      Proc. Natl. Acad. Sci. 104

      Pages: 6472-6477

    • Related Report
      2006 Annual Research Report
  • [Presentation] 可変領域および動物型DNAメチルトランスフェラーゼドメインをもつゼニゴケLTR-レトロトランスポゾン様転移因子DREの構造解析2008

    • Author(s)
      大和勝幸(他4名)
    • Organizer
      日本農芸化学会
    • Place of Presentation
      名古屋
    • Year and Date
      2008-03-28
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] 苔類ゼニゴケにおける分子遺伝学の基盤整備I<交配法の確立と遺伝地図の作製>2008

    • Author(s)
      友金寛和、大和勝幸(他5名)
    • Organizer
      日本植物生理学会
    • Place of Presentation
      札幌
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] 苔類ゼニゴケにおける分子遺伝学の基盤整備II<簡便かつ高効率なアグロバクテリウムによる形質転換>2008

    • Author(s)
      石崎公庸、千代田将大、大和勝幸、福澤秀哉、河内孝之
    • Organizer
      日本植物生理学会
    • Place of Presentation
      札幌
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] Characterization of novel LTR-retrotransposon-like element, DRE, in the liverwort Afarchantia polymorpha L2008

    • Author(s)
      Yamato, KT., et. al.
    • Organizer
      Annual Meeting of Japan Society for Bioscience, Biotechnology, and Agrochemistry 2008
    • Place of Presentation
      Nagoya
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] ゼニゴケ性染色体のなりたち2007

    • Author(s)
      大和勝幸
    • Organizer
      テクニカルワークショップ「コケ植物の実験生物学」
    • Place of Presentation
      岡崎
    • Year and Date
      2007-12-22
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] Organization of the liverwort sex chromosomes2007

    • Author(s)
      Yamato, KT
    • Organizer
      Technical Workshop Experimental Biology of Bryophy
    • Place of Presentation
      Okazaki
    • Year and Date
      2007-12-22
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] ゼニゴケ染色体の全構造に基づく性染色体の進化様式2007

    • Author(s)
      大山莞爾、大和勝幸(他21名)
    • Organizer
      日本植物学会(シンポジウム)
    • Place of Presentation
      野田
    • Year and Date
      2007-09-07
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] Structure and evolution of sex chromosomes in the liverwort hfarchantia polymorpha L2007

    • Author(s)
      Ohyama, K., Yamato, KT., et. al.
    • Organizer
      The 71st Annual Meeting of the Botanical Society of Japan
    • Place of Presentation
      Noda
    • Year and Date
      2007-09-07
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] ゼニゴケゲノムにはDNAメチルトランスフェラーゼドメインをもつ新規転移因子が存在する2007

    • Author(s)
      大和勝幸(他4名)
    • Organizer
      日本植物生理学会
    • Place of Presentation
      松山
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Novel transposable element in the liverwort Marchantia polymorpha L. contains DNA methyltransferase domain2007

    • Author(s)
      Yamato, KT., et. al.
    • Organizer
      The 48th Annual Meeting of the Japanese Society of Plant Physiologists
    • Place of Presentation
      Matsuyama
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Development of molecular genetic resources for Marchantia polymorpha : I crossing, and genetic mapping2007

    • Author(s)
      Tomogane, H., Yamato, KT., et. al.
    • Organizer
      The 49th Annual Meeting of the Japanese Society of Plant Physiologists
    • Place of Presentation
      Sapporo
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Development of molecular genetic resources for the liverwort,Marchantiapolymorpha II Simple and efficient Agrobacterium-mediated transformation2007

    • Author(s)
      Ishizaki, K., Chiyoda, S., Yamato, KT., et. al.
    • Organizer
      The 49th Annual Meeting of the Japanese Society of Plant Physiologists
    • Place of Presentation
      Sapporo
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] ゼニゴケY染色体の構造が示唆する半数体ゲノムにおける性染色体の進化特性2006

    • Author(s)
      大和勝幸(他21名)
    • Organizer
      日本分子生物学会2006フォーラム
    • Place of Presentation
      名古屋
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Evolutionary characteristics of sex chromosomes in haploid organism implied by the structure of the liverwort Y chromosome2006

    • Author(s)
      Yamato, KT., et. al.
    • Organizer
      Molecular Biology Society of Japan Forum 2006
    • Place of Presentation
      Nagoya
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary

URL: 

Published: 2006-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi