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Molecular mechanism and biological importance of epigenetic dynamics in germ line

Research Project

Project/Area Number 18510170
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 基礎ゲノム科学
Research InstitutionOsaka University

Principal Investigator

NOZAKI Masami  Osaka University, Research Institute for Microbial Diseases, Associate Professor (30189394)

Project Period (FY) 2006 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥4,240,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥540,000)
Fiscal Year 2007: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Fiscal Year 2006: ¥1,900,000 (Direct Cost: ¥1,900,000)
Keywordsgerm cell / genome / epigenetics / spermatogenesis / DNA methylation / protamine / gene expression / マウス / ヒストン
Research Abstract

1. To assess generality that testis specific-intronless genes are demethylated during spermatogenesis and axe re-methylated in sperm nuclei, we isolated testis specific genes from public databases, of which 39 intronless genes are determined to be exclusively expressed in testicular germ cells and examined methylation status of them. Eighty percent of these genes, which contain CpG-rich sequence within the gene, are hypomethylated in male germ line cells that include PGCs in genital ridge, gonocytes, spermatogonia, spermatocytes and spermatids. These genes are remethylated after cease their expression in late spermatogenesis. Other testis specific intronless genes are CpG-poor and hypermethylated in all cell types examined.
2. Testicular germ cell-specific intronless genes, which are unmethylated during spermatogenesis are found to be associated with histone-DNA region by chromatin immunoprecipitation (ChIP) assay and remethylated in these specific regions in sperm nuclei.
3. To examine the effects of remethylation of testis specific intronless genes in sperm nuclei on gene expression in early development, we perform pronuclear injection of expression constructs of Tact1 gene with or without DNA methylation. We show that the expression of methylated gene is hardly observed in fertilized eggs, indicating that remethylation of genes in sperm nuclei play important role on repression in early embryo.

Report

(3 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • Research Products

    (35 results)

All 2008 2007 2006

All Journal Article (23 results) (of which Peer Reviewed: 12 results) Presentation (10 results) Book (2 results)

  • [Journal Article] ESE-1 inhibits the invasion of oral squamous cell carcinoma in conjunction with MMP-9 suppression2008

    • Author(s)
      Souichi Iwai
    • Journal Title

      Oral Diseases 14

      Pages: 144-149

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] ESE-1 inhibits the invasion of oral squamous cell carcinoma in conjunction with MMP-9 suppression2008

    • Author(s)
      Souichi, Iwai
    • Journal Title

      Oral Diseases 14

      Pages: 144-149

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] ESE-1 inhibits the invasion of oral squamous cell carcinoma in conjunction with MMP-9 suppression2008

    • Author(s)
      Iwai, S., et. al.
    • Journal Title

      Oral Diseases 14

      Pages: 144-149

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Role of the Dnmt3 family in de novo methylation of imprinted and repetitive sequences during male germ cell development in the mouse2007

    • Author(s)
      Yuzuru Kato
    • Journal Title

      Human Molecular Genetics 16

      Pages: 2272-2280

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Conserved function of caspase-8 in apoptosis during bony fish evolution2007

    • Author(s)
      Shin-ichi Sakata
    • Journal Title

      Gene 134

      Pages: 134-148

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] The evolutionary conservation of the core components necessary for the extrinsic apoptotic signaling pathway, in Medaka fish2007

    • Author(s)
      Kazuhiro Sakamaki
    • Journal Title

      BMC Genomics 8

      Pages: 141-141

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Functional dynamics of H3K9 methylation during meiotic prophase progression2007

    • Author(s)
      Makoto Tachibana
    • Journal Title

      EMBO J 26

      Pages: 3346-3359

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Role of the Dnmt3a family in de novo methylation of imprinted and repetitive sequences during male germ cell development in the mouse2007

    • Author(s)
      Yuzuru, Kato
    • Journal Title

      Human Molecular Genetics 16

      Pages: 2272-2280

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Conserved function of caspases-8 in apoptosis during bony fish evolution2007

    • Author(s)
      Shimichi, Sakata
    • Journal Title

      Gene 134

      Pages: 134-148

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] The evolutionary conservation of the core components necessary for the extrinsic apoptotic signaling pathway, in Medaka fish2007

    • Author(s)
      Kazuhiro, Sakamaki
    • Journal Title

      BMC Genomics 8

      Pages: 141-141

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Functional dynamics of H3K9 methylation during meiotic prophase progression2007

    • Author(s)
      Makoto, Tachibana
    • Journal Title

      EMBO J 26

      Pages: 3346-3359

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Functional dynamics of H3K9 methylation during meiotic prophase progression2007

    • Author(s)
      Tachibana, M., Nozaki, M., et. al.
    • Journal Title

      EMBO J 26

      Pages: 3346-3359

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Role of the Dnmt3 family in de novo methylation of imprinted and repetitive sequences during germ cell development in the mouse2007

    • Author(s)
      Kato, Y., et. al.
    • Journal Title

      Human Molecular Genetics 16

      Pages: 2272-2280

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The evolutionary conservation of the core components necessary for the extrinsic apoptotic signaling pathway, in Medaka fish2007

    • Author(s)
      Sakamaki, K., et. al.
    • Journal Title

      BMC Genomics 8

      Pages: 141-141

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Conserved function of caspase-8 in apoptosis during bony fish evolution2007

    • Author(s)
      Sakata, S., et. al.
    • Journal Title

      Gene 396

      Pages: 134-148

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Comprehensive analysis of gene expression in testies producing haploid germ cells using DNA microarray analysis2007

    • Author(s)
      Ike, A., et. al.
    • Journal Title

      Int J Androl 30

      Pages: 462-475

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] ESE-1 inhibits the invasion of oral squamous cell carcinoma in conjunction with MMP-9 suppression2007

    • Author(s)
      Iwai S, et al.
    • Journal Title

      Oral Diseases (In press)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Epigenetic modification and gene regulation in male germ cells2006

    • Author(s)
      Masami Nozaki
    • Journal Title

      Recent Res. Devel. Biochem. 7

      Pages: 1-30

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] The initiator caspase, caspase-10β, and the BH-3-only molecule, Bid, demonstrate evolutionary conservation in Xenopus of their proapoptotic activities in the extrinsic and intrinsic pathways2006

    • Author(s)
      Katsuya Kominami
    • Journal Title

      Genes to Cells 11

      Pages: 701-717

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Epigenetic modification and gene regulation in male germ cells2006

    • Author(s)
      Masami, Nozaki
    • Journal Title

      Recent Res. Devel. Biochem 7

      Pages: 1-30

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] The initiator caspase,caspase-10b, and the BH-3-only molecule,Bid,demonstrate evolutionary conservation in Xenopus of their proapoptotic activities in the extrinsic and intrinsic pathyways2006

    • Author(s)
      Katsuya, Kominami
    • Journal Title

      Genes to Cells 11

      Pages: 701-717

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] The initiator caspase, caspase-10β, and the BH-3-only molecule, Bid,demonstrate evolutionary conservation in Xenopus of their pro-apoptotic activities in the extrinsic and intrinsic pathways2006

    • Author(s)
      Kominami k, et al.
    • Journal Title

      Genes to Cells 11

      Pages: 701-717

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Epigenetic modification and gene regulation in male germ cells2006

    • Author(s)
      Nozaki M
    • Journal Title

      Recent Research in Development of Biochemistry 7

      Pages: 1-30

    • Related Report
      2006 Annual Research Report
  • [Presentation] 精子核でメチル化される遺伝子はヒストンDNA領域に局在する2007

    • Author(s)
      野崎正美
    • Organizer
      日本アンドロロジー学会
    • Place of Presentation
      幕張ディズニーアンバサダーホテル
    • Year and Date
      2007-07-05
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Genes methylated in sperm nuclei locate in histone-DNA regions2007

    • Author(s)
      Masami, Nozaki
    • Organizer
      Annual Meeting, Japanese Society of Andrology
    • Place of Presentation
      Makuhari
    • Year and Date
      2007-07-05
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] 精子におけるゲノムのメチル化は、ヒストン結合領域で起こる2007

    • Author(s)
      野崎正美
    • Organizer
      第一回日本エピジェネティクス研究会
    • Place of Presentation
      大阪大学コンイベンションセンター
    • Year and Date
      2007-06-15
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] DNA methylation occurs in the genome associated with histones in sperm nuclei2007

    • Author(s)
      Masami, Nozaki
    • Organizer
      Annual Meeting, The Japanese Society of Epigenetics
    • Place of Presentation
      Osaka
    • Year and Date
      2007-06-15
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] DNA methylation occurs in part of the genome associated with histones in sperm nuclei2007

    • Author(s)
      Masami Nozaki
    • Organizer
      日本発生生物学会
    • Place of Presentation
      福岡国際会議場
    • Year and Date
      2007-05-29
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] DNA methylation occurs in part of the genome associated with histones in sperm nuclei2007

    • Author(s)
      Masami, Nozaki
    • Organizer
      Annual Meeting, Japan Society of Molecular Biologist
    • Place of Presentation
      Fukuoka
    • Year and Date
      2007-05-29
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] DNA methylation occurs in part of the genome associated with histones in sperm nuclei2007

    • Author(s)
      Hisano, M., et. al.
    • Organizer
      日本発生生物学会
    • Place of Presentation
      福岡市福岡国際会議場
    • Related Report
      2007 Annual Research Report
  • [Presentation] 精子核でメチル化される遺伝子はヒストンDNA領域に局在する2007

    • Author(s)
      野崎正美, 他
    • Organizer
      日本アンドロロジー学会
    • Place of Presentation
      千葉県浦安市ディズニーアンバサダーホテル
    • Related Report
      2007 Annual Research Report
  • [Presentation] 精子におけるゲノムのメチル化はヒストン結合領域で起こる2006

    • Author(s)
      Masami Nozaki
    • Organizer
      日本分子生物学会2006フォーラム
    • Place of Presentation
      名古屋国際会議場
    • Year and Date
      2006-12-08
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Genome methylation occurs in histone binding region in sperm nuclei2006

    • Author(s)
      Masami, Nozaki
    • Organizer
      2006 Forum of the Molecular Biology Society of Japan
    • Place of Presentation
      Nagoya
    • Year and Date
      2006-12-08
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] Genetic and Epigenetic Control of Mammalian Germ Cell Development and Function2008

    • Author(s)
      Masami Nozaki(Ed)
    • Publisher
      Research Signpost(In press)
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] Genetic and Epigenetic Control of Mammalian Germ Cell Development and Function2008

    • Author(s)
      Masami, Nozaki
    • Publisher
      (in press)
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary

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Published: 2006-04-01   Modified: 2016-04-21  

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