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Studies on Determination of Absolute Stereochemistry of Stereochemically Undefined Natural Polyether Macrolides by NMR Comparison with Synthetic Macrocyclic Models

Research Project

Project/Area Number 18510179
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Living organism molecular science
Research InstitutionHokkaido University

Principal Investigator

FUJIWARA Kenshu  Hokkaido University, Fac. of Sci., Associate Professor (20222268)

Project Period (FY) 2006 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥4,240,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥540,000)
Fiscal Year 2007: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Fiscal Year 2006: ¥1,900,000 (Direct Cost: ¥1,900,000)
KeywordsGoniodomin A / Bioactive natural products / Determination of stereochemistry / Polyether macrorides / Macrocyclization / Macrocyclic analogues / Confromational restriction / NMR analysis / 生活物性天然物
Research Abstract

To confirm the absolute stereochemistry of goniodomin A, a structurally undefined polyether macrolide, its total synthesis was planned and investigated. Goniodomin A was isolated from dinoflagellate Alexandrium hiranoi as an antifungal agent by Murakami in 1988. Later, its particular bioactivities, such as modulation of actomyosin ATPase activities, increasing the filamentous actin content of human astronoma cells, and antiangiogenic activity via inhibition of actin reorganization in endothelial cells, were found. Although its detailed NMR data and unique planer structure featured by a 32-membered macrolactone including 5- and 6-membered cyclic ethers (the A-, D- and E-ring parts), a spirocyclic acetal (the BC-ring part), and a 6-membered cyclic hemiacetal (the F-ring part) were reported, the stereochemistry of goniodomin A was unclear. From this research project, determination of the relative configurations of the A-, DE-, F-rings of goniodomin A and their partial synthesis have been achieved. The followings efforts were also made: (1) some candidate relative configurations for the ABC-ring of goniodomin A were predicted from the NMR data of the natural product reported by Murakami; (2) three model compounds having the predicted configurations were synthesized; (3) when NMR data of natural goniodomin A were compared with those of model compounds, one of the models showed almost identical data except the coupling constant between H15 and H14, suggested that the natural ABC-ring was a C15 epimer of the model; (4) after several experiments, it was also suggested that the natural BC-ring had a particular configuration that could only be realized by the presence of the macrolide framework; (5) a synthetic method for the CDE-ring segment having proper stereochemistry was developed.

Report

(3 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • Research Products

    (12 results)

All 2008 2007 2006

All Journal Article (10 results) (of which Peer Reviewed: 5 results) Presentation (2 results)

  • [Journal Article] Synthesis of the DE-ring of goniodomin A and prediction of its natural relative stereochemistry2008

    • Author(s)
      Takahiro Katagiri
    • Journal Title

      Tetrahedron Letters 49

      Pages: 233-237

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Synthesis of the ABC-ring models of goniodomin A: preference for the unnatural configuration at Cll of the BC-ring in a non-macrocyclic model system2008

    • Author(s)
      Takahiro Katagiri
    • Journal Title

      Tetrahedron Letters 49(印刷中)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Synthesis of the DE-ring of goniodomin A and prediction of its natural relative stereochemistry.2008

    • Author(s)
      Takahiro Katagiri, Kenshu Fujiwara, Hidetoshi Kawai, Takanori Suzuki
    • Journal Title

      Tetrahedron Lett. 49,(2)

      Pages: 233-237

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Synthesis of the ABC-ring models of goniodomin A: preference for the unnatural configuration at C11 of the BC-ring in a non-macrocyclic model system.2008

    • Author(s)
      Takahiro Katagiri, Kenshu Fujiwara, Hidetoshi Kawai, Takanori Suzuki
    • Journal Title

      Tetrahedron Lett. 49,(2)

      Pages: 3242-3247

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Synthesis of the ABC-ring models of goniodomin A: preference for the unnaturalconfiguration at Cll of the BC-ring in a non-macrocyclic model system2008

    • Author(s)
      Takahiro Katagiri
    • Journal Title

      Tetrahedron Letters 49(印刷中)

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Synthesis and Relative Stereochemistry of the A-and F-ring parts of Goniodomin A2007

    • Author(s)
      Kenshu Fujiwara
    • Journal Title

      Bulletin of the Chemical Society of Japan 80

      Pages: 1173-1186

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Synthesis and relative stereochemistry of the A-and F-rings of goniodomin A.2007

    • Author(s)
      Kenshu Fujiwara, Jota Naka, Takahiro Katagiri, Daisuke Sato, Hidetoshi Kawai, Takanori Suzuki
    • Journal Title

      Bull. Chem. Soc. Jpn. 80,(6)

      Pages: 1173-1186

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Convergent synthesis of the common FGHI-ring part of ciguatoxin2006

    • Author(s)
      Ayumi Takizawa
    • Journal Title

      Tetrahedron 62

      Pages: 7408-7435

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Convergent synthesis of the common FGHI-ring part of ciguatoxins.2006

    • Author(s)
      Ayumi Takizawa, Kenshu Fujiwara, Eriko Doi, Akio Murai, Hidetoshi Kawai, Takanori Suzuki
    • Journal Title

      Tetrahedron 62,(31)

      Pages: 7408-7435

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Convergent synthesis of the common FGHI-ring part of ciguatoxin2006

    • Author(s)
      Ayumi Takizawa
    • Journal Title

      Tetrahedron 62・31

      Pages: 7408-7435

    • Related Report
      2006 Annual Research Report
  • [Presentation] ゴニオドミンAのABC環部分の合成2007

    • Author(s)
      片桐隆廣
    • Organizer
      日本化学会第87春季年会
    • Place of Presentation
      大阪
    • Year and Date
      2007-03-26
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Synthesis of the ABC-ring of goniodomin A2007

    • Author(s)
      Takahiro Katagiri, Kenshu Fujiwara, Hidetoshi Kawai, Takanori Suzuki
    • Organizer
      87th Spring Meeting of the Chemical Sciety of Japan
    • Place of Presentation
      Osaka
    • Year and Date
      2007-03-26
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary

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Published: 2006-04-01   Modified: 2016-04-21  

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