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Analysis of chloroplast division mechanism by genome information, gene expression profile and reverse genetics.

Research Project

Project/Area Number 18570036
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 植物生理・分子
Research InstitutionTokyo Institute of Technology

Principal Investigator

SHIMADA Hiroshi  Tokyo Institute of Technology, Graduate School of Bioscience and Biotechnology, Assistant Professor (80301175)

Project Period (FY) 2006 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥4,050,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥450,000)
Fiscal Year 2007: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2006: ¥2,100,000 (Direct Cost: ¥2,100,000)
KeywordsGenome / Plant / Regulation of expression / Chloroplast
Research Abstract

I selected 120 genes that are co-expressed with ARC3 and FtsZ genes, chloroplast division factor, using a gene expression profile in Arabidopsis thaliana, and I got the T-DNA line of the each gene from a stock center. I screened the homo lines of T-DNA insertion from the seeds by PCR. A number or size of chloroplasts in the homo line cells were observed with an optical microscope. The T-DNA lines of At1g56050 and At1g26230 had a small number of abnormally large chloroplasts in the cells, suggesting that At1g56050 and At1g26230 were the novel chloroplast division factors. The interaction of ARC3 protein and At1g56050 or At1g26230 were analyzed with yeast two-hybrid system. The results indicated that At1g56050 protein interacted with ARC3 protein. It was suggested that At1g56050 (GTP-binding protein) was the novel chloroplast division factor.
DNA array analysis revealed that gene expression profile between wild type and arc3 mutant plants was almost same but the expression of At5g42825 in the mutant was higher than that of wild type. At5g42825 gene has no clear protein coding region, suggesting that At5g42825 might have a function as native RNAi.

Report

(3 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • Research Products

    (6 results)

All 2007

All Journal Article (6 results) (of which Peer Reviewed: 4 results)

  • [Journal Article] Arabidopsis Cotyledon-Specific Chloroplast Biogenesis Factor CYO1 is a Protein Disuflide Isomerase.2007

    • Author(s)
      Hiroshi Shimada, et. al.
    • Journal Title

      The Plant Cell 19

      Pages: 3157-3169

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Identification of SIP that interacts with SPB, a trans-acting repressor, in Rhodo bacter sphacroides.2007

    • Author(s)
      Hiroshi Shimada, et. al.
    • Journal Title

      Plant & Cell Physiology 48

      Pages: 1504-1508

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Arabidopsis cotyledon-specific chloroplast biogenesis factor CYO1 is a protein disulfide isomerase2007

    • Author(s)
      H., Shimada, H., Mochizuki, M., Ogura, K., Froehlich, J. E., Osteryoung, K. W., Shirano, Y., Shibata, D., Masuda, S., Mori, K. and Takamiya, K.
    • Journal Title

      The Plant Cell 19

      Pages: 3157-3169

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] H., Ishida, K., Machiya, Y. and Takamiya, K. Isolation of SIP, a protein that interacts with SPB, a possible transcriptional regulatory factor in Rhodobacter sphaeroides.2007

    • Author(s)
      H., Shimada
    • Journal Title

      Plant &Cell Physiology 48

      Pages: 1504-1508

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Arabidopsis Cotyledon-Specific Chloroplast Biogenesis Factor CYOl is a Protein Disuflide Isomerase.2007

    • Author(s)
      Hiroshi Shimada, et. al.
    • Journal Title

      The Plant Cell 19

      Pages: 3157-3169

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification of SIP that interacts with SPB, a trans-acting repressor, in Rhodobacter sphaeroides.2007

    • Author(s)
      Hiroshi Shimada, et. al.
    • Journal Title

      Plant&Cell Physiology 48

      Pages: 1504-1508

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed

URL: 

Published: 2006-04-01   Modified: 2016-04-21  

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