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Variety and dynamics of electron donors involved in primary reactions of bacterial photosynthesis

Research Project

Project/Area Number 18570045
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 植物生理・分子
Research InstitutionTokyo Metropolitan University

Principal Investigator

NAGASHIMA Kenji  Tokyo Metropolitan University, Dept., Biological Science, Assistant Prof (80264589)

Project Period (FY) 2006 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥3,860,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥360,000)
Fiscal Year 2007: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2006: ¥2,300,000 (Direct Cost: ¥2,300,000)
KeywordsPhotosynthesis / Electron transfer / Cvtochrome / Electron donor / Heme / Redox potential / Reaction center / Photosynthetic bacteria / 遺伝子操作 / 光化学反応中心 / 進化
Research Abstract

1.New electron carrier proteins working as electron donors to the reaction center complex have been searched in purple photosynthetic bacteria.
(1)New membrane-bound cytochrome c with a molecular mass of 50 kDa was found in a marine species, Rhodovulum sulfidophilum. Growth tests using mutants lacking this cytochrome showed that this cytochrome can completely support photosynthetic cyclic electron transport, as well as a popular electron carrier, cytochrome c_2. This new cytochrome was named cytochrome c_2m, taking into account its high sequence similarity with the cytochrome c_2 at the core region.
(2)A c-type cytochrome with a molecular mass of 25 kDa was newly found as a potential electron donor to the reaction center in aβ-purple bacterium, Rubrivivax gelatinosus. Based on sequence analyses, this cytochrome was identified as a homolog of cytochrome c4, which physiological functions have not been well clarified. In R gelatinosus, growth tests for the mutants lacking this cytochrome showed that this cytochrome can contribute to the photosynthetic electron transfer. This is the first experimental evidence to show that cytochrome c_4 can work as a physiological electron donor to the reaction center.
2.Redox midpoint potentials of two low-potential hemes in the tetrahemic cytochrome subunit bound to the reaction center have been raised about 60 mV by site-directed mutagenesis. These alterations resulted in changes in the rates of electron transfer from the high-potential hemes to the special pair of bacteriochlorophylls when peripheral redox potentials were lowered below the new midpoint potentials of the low-potential hemes. It was suspected that midpoint potentials of hemes are dynamically changed, depending on the redox states of the neighboring hemes.

Report

(3 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • Research Products

    (24 results)

All 2008 2007 2006 Other

All Journal Article (7 results) (of which Peer Reviewed: 1 results) Presentation (16 results) Remarks (1 results)

  • [Journal Article] A new membrane-bound cytochrome c works as an electron donor to the photosynthetic reaction center complex in the purple bacterium,Rhodovulum sulfidophilum2007

    • Author(s)
      Kimura, Y.
    • Journal Title

      Journal of Biological Chemistry 282

      Pages: 6463-6472

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] 紅色光合成細菌における反応中心への電子供与体の多様性2007

    • Author(s)
      永島 賢治
    • Journal Title

      光合成研究 17

      Pages: 29-35

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] A new membrane-bound cytochrome c works as an electron donor to the photosynthetic reaction center complex in the purple bacterium, Rhodovulum sulfidophilum2007

    • Author(s)
      Kimura, et. al.
    • Journal Title

      Journal of Biological Chemistry 282

      Pages: 6463-6472

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Koushoku-Saikin ni-okeru flan-nou-Chuushin heno Den-shi-Kyouyotai no Tayousei(in Japanese)2007

    • Author(s)
      Nagashima, Kenji
    • Journal Title

      Kougousei-Ken-kyuu 17

      Pages: 29-35

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] 紅色光合成細菌における反応中心への電子供与体の多様性2007

    • Author(s)
      永島賢治
    • Journal Title

      光合成研究 17

      Pages: 29-35

    • Related Report
      2007 Annual Research Report
  • [Journal Article] A new membrane-bound cytochrome c works as an electron donor to the photosynthetic reaction center complex in the purple bacterium, Rhodovulum sulfidophilum2007

    • Author(s)
      Y.Kimura
    • Journal Title

      Journal of Biological Chemistry 282

      Pages: 6463-6472

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Kinetic performance and energy profile in a roller coaster electron transfer chain : a study of modified tetraheme-reaction center constructs2006

    • Author(s)
      J.Alric
    • Journal Title

      Journal of American Chemical Society 128

      Pages: 4136-4145

    • Related Report
      2006 Annual Research Report
  • [Presentation] 紅色光合成細菌Rubrivivax gelatinosusの新規c_8型チトクロムの一次構造と機能2008

    • Author(s)
      永島 咲子
    • Organizer
      第49回日本植物生理学会年会
    • Place of Presentation
      札幌
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Characterization of cytochrome c_8 isoform newly purified from the purple bacterium, Rubrivivax gelatinosus2008

    • Author(s)
      Nagasima, et. al.
    • Organizer
      The 49th Annual Meeting of the Japanese Society of Plant Physiologists (JSPP)
    • Place of Presentation
      Sapporo
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] 紅色光合成細菌Rubrivivax gelatinosusの新規c8型チトクロムの一次構造と機能2008

    • Author(s)
      永島咲子
    • Organizer
      第49回日本植物生理学会年会
    • Place of Presentation
      札幌
    • Related Report
      2007 Annual Research Report
  • [Presentation] 紅色光合成細菌Rhodovulum sulfidophilumにおいて光化学反応中心への電子供与体として働く膜結合陸チトクロムcの遺伝子破壊を通じた生理的役割の解明2007

    • Author(s)
      木村 泰明
    • Organizer
      第48回日本植物生理学会年会
    • Place of Presentation
      松山
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] 繊維状光合成細菌Roseiflexus castenholziiの銅蛋白質オーラシアニンの性質2007

    • Author(s)
      塚谷 祐介
    • Organizer
      第48回日本植物生理学会年会
    • Place of Presentation
      松山
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] チトクロムの内と外:アミノ酸変異導入による電子伝達機能の改変2007

    • Author(s)
      永島 賢治
    • Organizer
      第22回ナノ・バイオテクノロジー研究会
    • Place of Presentation
      名古屋
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Physiological role analyzed by gene disruption of membrane-bound cytochrome c working as an electron donor to the photochemical reaction center complex in the purple bacterium, Rhodovulum sulfidophilum2007

    • Author(s)
      Kimura, et. al.
    • Organizer
      The 48th Annual Meeting of the Japanese Society of Plant Physiologists (JSPP)
    • Place of Presentation
      Matsuyama
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Characterization of a blue copper protein auracyanin from the filamentous anoxygenic phototroph Roseiflexus castenholzii2007

    • Author(s)
      Tsukatani, et. al.
    • Organizer
      The 48th Annual Meeting of the Japanese Society of Plant Physiologists (JSPP)
    • Place of Presentation
      Matsuyama
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Inside and outside of cytochromes2007

    • Author(s)
      Nagashima
    • Organizer
      22th Seminor of Nano-Biothechnology Association
    • Place of Presentation
      Nagoya
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] チトクロムの内と外: アミノ酸変異導入による電子伝達機能の改変2007

    • Author(s)
      永島賢治
    • Organizer
      第22回ナノ・バイオテクノロジー研究会
    • Place of Presentation
      名古屋
    • Related Report
      2007 Annual Research Report
  • [Presentation] Variation in electron donors to photosynthetic reaction center of purple bacteria2006

    • Author(s)
      Nagashima, K.V.P.
    • Organizer
      第6回日本光合成研究会シンポジウム
    • Place of Presentation
      横浜
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Diheme cytochrome c working as physiological electron donor to photosynthetic reaction center in the purple bacterium,Rubrivivax gelatinosus2006

    • Author(s)
      Ohmine, M.
    • Organizer
      12th International Symposium on Phototrophic Prokaryotes
    • Place of Presentation
      ボー(フランス)
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] New systems for identification of amino acid residues responsible for molecular recognition between cytochrome c_2 and RC-bound cytochrome of the purple photosynthetic bacterium,Blastochloris viridis2006

    • Author(s)
      Nagashima, S.
    • Organizer
      12th International Symposium on Phototrophic Prokaryotes
    • Place of Presentation
      ボー(フランス)
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Variation in electron donors to photosynthetic reaction center of purple bacteria2006

    • Author(s)
      Nagashima, K. V., P
    • Organizer
      6th oSymposium of the Japanese Association for Photosynthesis Research
    • Place of Presentation
      Yokohama
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Diheme cytochrome c working as physiological electron donor to photosynthetic reaction center in the purple bacterium, Rubrivivax gelatinosus2006

    • Author(s)
      Ohmine, et. al.
    • Organizer
      12th International Symposium on Phototrophic Prokaryotes
    • Place of Presentation
      Pau
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] New systems for identification of amino acid residues responsible for molecular recognition between cytochrome c_2 and RC-bound cytochrome of the purple photosynthetic bacterium, Blastochloris viridis2006

    • Author(s)
      Nagashima, et. al.
    • Organizer
      12th International Symposium on Phototrophic Prokaryotes
    • Place of Presentation
      Pau
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Remarks]

    • URL

      http://www.comp.tmu.ac.jp/celene/

    • Related Report
      2007 Annual Research Report

URL: 

Published: 2006-04-01   Modified: 2016-04-21  

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