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Degradation mechanism of the chloroplast protein in the cell death of the plant

Research Project

Project/Area Number 18570124
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Functional biochemistry
Research InstitutionShizuoka University

Principal Investigator

AMANO Toyoki  Shizuoka University, Department of Biological Science, Associate Professor (90297945)

Project Period (FY) 2006 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥300,000)
Fiscal Year 2007: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2006: ¥2,600,000 (Direct Cost: ¥2,600,000)
Keywordsenzyme / protease / 品質管理 / 発現系 / ATPase / プロテアーゼ / 酵素 / 調節 / 作用機作
Research Abstract

Plant FtsH pretence is a membrane-associated protease localized on the thylakoid membrane. Its function is to remove a damaged protein from large protein complex. Major physiological substrate of this protease is Dl protein whose subunit plays a key role in the photosystem II. Knockout mutants of this protease shows variegated phenotype in Arabidopsis, therefore physiological function of this protease is to maintenance the chloroplast proteins. In this study, we constructed over-expression system of ATPase and potease domain in FtsH potease from Arabidopsis and tobacco.
In ease of protease domain from tobacco, protein was produced as inclusion body, though them were possible to be activated by urea mediated refolding. Expressed protein showed protease activity on FITC (fluorescein isothiocyanate)-labeled casein. FITC-BSA. (bovine serum albumin) did not digested by this protease, thus substrate specificity was detected on this protease. Biochemical study revealed that protease activity w … More as enhanced by higher concentration of magnesium ion. Optimum pH was determined as alkalescent condition.
ATPase domain in FtsH protease from tobacco was constructed over-expression system in E.coli. This system produced the recombinant protein in the soluble fraction. The protein was purified by Ni^(2+) affinity chromatography. The eluted fraction was verified as ATPase domain by western blotting and peptide sequencing. ATPase activity was obviously detected. Using this system, we analyzed the dependencies of pH, divalent cations, ATP concentration, and the effect of detergents.
Over-expression system for ATPase domain from Arabidopsis was also constructed. Purification was performed using Ni-NTA column. The quality of this protein was verified by western blotting and peptide sequencing. We examined biochemical analysis on the purified protein. And we revealed pH optimum and dependency of Mg^(2+) concentration. We also investigated effect of inhibitors. Among them, EDTA was the highest inhibitory effect. The results suggest that ATPase domain in the FtsH protease depends on divalent cations. We are trying to determine Km and Vmax, optimum temperature, and effective substrate except for ATP. Less

Report

(3 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • Research Products

    (13 results)

All 2008 2007 2006 Other

All Journal Article (3 results) (of which Peer Reviewed: 1 results) Presentation (9 results) Remarks (1 results)

  • [Journal Article] Characterization and cloning of the chlorophy11-degrading enzyme pheophorbidase from cotyledons of radish.2006

    • Author(s)
      Suzuki, Y., Amano, T., Shioi, Y.
    • Journal Title

      Plant Physiol, . 140

      Pages: 716-725

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Characterization and cloning of the chlorophy11-degrading enzyme pheophorbidase from cotyledons of radish2006

    • Author(s)
      Suzuki, Y., Amano, T., Shioi, Y
    • Journal Title

      Plant Physiol 140

      Pages: 716-725

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] haracterization and cloning of the chlorophyll-degrading enzyme pheophorbidase from cotyledons of radish.2006

    • Author(s)
      Suzuki, Y., Amano, T., Shioi, Y.
    • Journal Title

      Plant Physiol. 140

      Pages: 716-725

    • Related Report
      2006 Annual Research Report
  • [Presentation] タバコ由来のFtsHプロテアーゼにおけるプロテアーゼドメインの解析2008

    • Author(s)
      天野豊己、新実康太、堀恵悟、湯沢優一
    • Organizer
      第49回日本植物生理学会年会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2008-03-20
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] タバコ由来FtsHプロテアーゼのATPaseドメインの解析2008

    • Author(s)
      湯沢優一、天野豊己
    • Organizer
      第49回日本植物生理学会年会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2008-03-20
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] シロイヌナズナの斑入り形成に関与するFtsHプロテアーゼVAR1サブユニットにおけるATP 加水分解の分子機構2008

    • Author(s)
      堀恵悟、天野豊己
    • Organizer
      第49回日本植物生理学会年会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2008-03-20
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] タバコ由来のFtsHプロテアーゼにおけるプロテアーゼドメインの解析2008

    • Author(s)
      天野 豊己、新実 康太、堀恵 悟、湯沢 優一
    • Organizer
      日本植物生理学会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2008-03-20
    • Related Report
      2007 Annual Research Report
  • [Presentation] Biochemical characterization of protease domain in FtsH protease from tobacco2008

    • Author(s)
      Amano, T., Niimi, K., Hord, K., Yuzawa, Y
    • Organizer
      The Japanese Society of Plant Physiologists 2008 Annual Meeting
    • Place of Presentation
      Sapporo
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] 植物由来FtsHプロテアーゼの解析2007

    • Author(s)
      天野豊己
    • Organizer
      第48回日本植物生理学会年会
    • Place of Presentation
      愛媛大学
    • Year and Date
      2007-03-30
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Biochemical characterization of FtsH protease from plants2007

    • Author(s)
      Amano, T
    • Organizer
      The Japanese Society of Plant Physiologists 2007 Annual Meeting
    • Place of Presentation
      Matsuyama
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Over-expression and analysis of ATPase domain in DS9, FtsH protease from Tobacco

    • Author(s)
      Yuzawa, Y., Amano, T
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Molecular mechanism of ATP hydrolysis in FtsH protease VAR1 subunit from Arabidopsis

    • Author(s)
      Hori, K., Amano, T
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Remarks] 「研究成果報告書概要(和文)」より

    • URL

      http://www.ipc.shizuoka.ac.jp/~sbtaman/

    • Related Report
      2007 Final Research Report Summary

URL: 

Published: 2006-04-01   Modified: 2016-04-21  

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