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Elucidation of origin of citrus based on information from chromosome analysis

Research Project

Project/Area Number 18580028
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Horticulture/Landscape architecture
Research InstitutionKagoshima University

Principal Investigator

YAMAMOTO Masashi  Kagoshima University, Faculty of Agriculture, Associate Professor (00305161)

Co-Investigator(Kenkyū-buntansha) MATSUMOTO Ryoji  Saga University, Faculty of Agriculture, Professor (40355409)
Project Period (FY) 2006 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥3,540,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥240,000)
Fiscal Year 2007: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2006: ¥2,500,000 (Direct Cost: ¥2,500,000)
Keywordshorticulture / genetic resources / evolution / citrus / Aurantioideae / chromosome / FISH / CMA / 育種
Research Abstract

Although citrus, belong to Aurantioideae which is one of the seven subfamilies of Rutaceae, is the one of the most important fruit crop in the world, its origin and phylogenic relationships among species in Aurantioideae has been unclarified. Therefore in this study, we conducted chromosome analysis to elucidate the phylogenic relationships and evolution within Aurantioideae.
The chromosome number analysis revealed that almost all Aurantioideae species had diploid (2n=2x=18) chromosomes. Only two species were tetraploid (2n=4x=36). Glycosmis pentaphylla was a mixoploid having diploid and hexaploid (2n=6x=54) cells.
Fluorochrome staining with chromomycin A3 (CMA) was used to characterize and compare the CMA banding patterns of chromosomes of 21 species from 16 genera of Aurantioideae. These chromosomes were classified into six types based on the number and position of CMA-positive bands ; A : two telomeric and one proximal band, B : one telomeric and one proximal band, C : two telomeric b … More ands, D : one telomeric band, E : without bands, and Dst : type D with a satellite chromosome. Each species possessed one to four types of chromosomes and unique CMA banding patterns. The advanced genera in each tribe and subtribe such as Merrillia and Feroniella showed heterochromatin (CMA-positive bands). rich chromosome configuration in general. Swinglea glutinosa without heterochromatin rich chromosome, which is considered to be the most primitive chromosome configuration, seems to be the key genus for clarifying the evolution of the tribe Citreae.
Fluorescent in situ hybridization (FISH) using ribosomal RNA genes (rDNA) is a powerful tool for phylogenic studies. Thus FISH of 5S rDNA was carried out in seven genera from primitive to advanced one. Two 5S rDNA sites were detected in six out of seven genera. Poncirus had six 5S rDNA sites. From these results, two seem to be a base number of 5S rDNA sites in Aurantioideae. Diversity of number of 5S rDNA sites occurred after the true citrus fruit trees were differentiated. Less

Report

(3 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • Research Products

    (15 results)

All 2008 2007

All Journal Article (10 results) (of which Peer Reviewed: 5 results) Presentation (5 results)

  • [Journal Article] CMA staining analysis of chromosomes in Citrus relatives,Clymenia,Eremocitrus and Micrositrus2008

    • Author(s)
      Yamamoto, M., A.Asadi Abkenar, R.Matsumoto, T.Kuboand S.Tominaga
    • Journal Title

      Journal of the Japanese Society for Horticultural Science 77

      Pages: 24-27

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] CMA staining analysis of chromosomes in several species of Aurantioideae2008

    • Author(s)
      Yamamoto, M., A.Asadi Abkenar, R.Matsumoto, T.Kuboand S.Tominaga
    • Journal Title

      Genetic Resources and Crop Evolution (印刷中)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] CMA staining analysis of chromosomes in Citrus relatives, Clymenia, Eremocitrus and Microcitrus2008

    • Author(s)
      Yamamoto, M., A., Asadi, Abkenar, R., Matsumoto, T., Kubo, S., Tominaga
    • Journal Title

      Journal of the Japanese Society for Horticultural Science 77

      Pages: 24-27

    • NAID

      130004951535

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] CMA staining analysis of chromosomes in several species of Aurantioideae2008

    • Author(s)
      Yamamoto, M., A, Asadi, Abkenar, R., Matsumoto, T., Kubo, S., Tominaga
    • Journal Title

      Genetic Resources and Crop Evolution (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] CMA staining analysis of chromosomes in Citrus relatives, Clymenia, Eremocitrus and Microcitrus2008

    • Author(s)
      Yamamoto, M., A. Asadi Abkenar, R. Matsumoto, T. Kubo, S. Tominaga
    • Journal Title

      Journal of the Japanese Society for Horticultural Science 77

      Pages: 24-27

    • NAID

      130004951535

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] CMA staining analysis of chromosomes in several species belonged to Aurantioideae2008

    • Author(s)
      Yamamoto, M., A. Asadi Abkenar, R. Matsumoto, T. Kubo, S. Tominaga
    • Journal Title

      Genetic Resources and Crop Evolution (印刷中)

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Application of fluorescent staining of chromosomes to genetic studies in citcus2007

    • Author(s)
      Yamamoto, M.
    • Journal Title

      Japanese Journal of Plant Science 1

      Pages: 13-19

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Application of fluorescent staining of chromosomes to genetic studies in citrus2007

    • Author(s)
      Yamamoto, M
    • Journal Title

      Japanese Journal of Plant Science 1

      Pages: 13-19

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Journal Article] CMA banding patterns of chromosomes in Major Citrus species2007

    • Author(s)
      山本雅史
    • Journal Title

      Journal of the Japanese Society for Horticultural Science 76・1

      Pages: 36-40

    • NAID

      110006203469

    • Related Report
      2006 Annual Research Report
  • [Journal Article] カンキツ属近縁のClymenia, EremocitrusおよびMicrocitrusにおける染色体のCMA染色2007

    • Author(s)
      山本雅史
    • Journal Title

      園芸学研究 6・別冊1

      Pages: 34-34

    • NAID

      130004951535

    • Related Report
      2006 Annual Research Report
  • [Presentation] ミカン亜科植:物における染色体のCMA染色2007

    • Author(s)
      山本 雅史・A.Asadi Abkenar・松本 亮司・久保 達也・冨永 茂人
    • Organizer
      第2回九州育種談話会
    • Place of Presentation
      鹿児島市,鹿児島大学農学部
    • Year and Date
      2007-11-30
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] CMA staining analysis of chromosomes in several species of Aurantioideae2007

    • Author(s)
      Yamamoto, M., A. Asadi, Abkenar, R. Matsumoto, T. Kubo, S. Tominaga
    • Organizer
      Annual Conference of Japanese Society of Breeding in Kyushu
    • Place of Presentation
      Kagoshima
    • Year and Date
      2007-11-30
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] ミカン亜科植物における染色体のCMA染色2007

    • Author(s)
      山本雅史・A. Asadi Abkenar・松本亮司・久保達也・冨永茂人
    • Organizer
      第2回九州育種談話会
    • Place of Presentation
      鹿児島大学農学部
    • Year and Date
      2007-11-30
    • Related Report
      2007 Annual Research Report
  • [Presentation] カンキツ近縁属のClymenia,Eremocitrus,Microcitrusにおける染色体のCMA染色2007

    • Author(s)
      山本 雅史・A.Asadi Abkenar・松本 亮司・久保 達也・冨永 茂人
    • Organizer
      園芸学会平成19年度春季大会
    • Place of Presentation
      京都市,京都テルサ
    • Year and Date
      2007-03-24
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] CMA staining analysis of chromosomes in Citrus relatives, Clymenia, Eremocitrus and Microcitrus2007

    • Author(s)
      Yamamoto, M., A., Asadi, Abkenar, R., Matsumoto, T., Kubo, S., Tominaga
    • Organizer
      Annual Conference of Japanese Society for Horticultural Science
    • Place of Presentation
      Kyoto
    • Year and Date
      2007-03-24
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary

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Published: 2006-04-01   Modified: 2016-04-21  

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