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Development of In Situ Methylation-Specific PCR

Research Project

Project/Area Number 18590330
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Human pathology
Research InstitutionYamaguchi University

Principal Investigator

KAWAUCHI Shigeto  Yamaguchi University, Graduate School of Medicine, Associate Professor (80284511)

Co-Investigator(Kenkyū-buntansha) SASAKI Kohsuke  Yamaguchi University, Graduate School of Medicine, Professor (80116722)
Project Period (FY) 2006 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥2,070,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥270,000)
Fiscal Year 2007: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2006: ¥900,000 (Direct Cost: ¥900,000)
Keywordsin situ MSP / epigenetics / CpG island cytosine hypermethylation / in situ PCR / methylatio-specific PCR / gene silencing / 遺伝子CpGメチル化
Research Abstract

Gene promoter hypermethylation is one of the essential mechanisms that regulate gene expression and silencing and associated with imprinting of gene, carcinogenesis and other various problems concerning clinical medicine. Our aim is to develop a method visualizing cells with p16 gene promoter CpG islands hypermethylation on a tissue section, ie, in situ methylation-specific PCR (in situ MSP). The method consists of three steps; 1^<st>, protease digestion and microwave irradiation to skeletonize genomic DNA on a tissue section; 2^<nd>, cytosine to uracil transition by sodium bisulfite; 3^<rd>, amplification and visualization by in situ PCR technique. In the present study, we established a prototype technique for in situ MSP and presented it in the 97^<th> annual meeting of the Japanese Society of Pathology. Paper is now on preraration.

Report

(3 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • Research Products

    (16 results)

All 2008 2007 2006 Other

All Journal Article (10 results) (of which Peer Reviewed: 6 results) Presentation (3 results) Book (1 results) Remarks (2 results)

  • [Journal Article] Influence of cytological stains on comparative genomic hybridization analysis for DNA extracted from cytological smears.2007

    • Author(s)
      Kawauchi S, et. al.
    • Journal Title

      Oncology Reports 18

      Pages: 1219-1223

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Chromosomal aberrations detected by comparative genomic hybridization predict outcome in patients with colorectal carcinoma.2007

    • Author(s)
      Liu XP, et. al.
    • Journal Title

      Oncology Reports 17

      Pages: 261-267

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Influence of cytological stains on comparative genomic hybridization analysis for DNA extracted from cytological smears2007

    • Author(s)
      Kawauchi, S, Sugimoto S, Liu, XP, Ikemoto K, Furuya, T, Takahashi, M, Sasaki, K
    • Journal Title

      Oncology Reports 18-5

      Pages: 1219-1223

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Chromosomal aberrations detected by comparative genomic hybridization predict outcome in patients with colorectal carcinoma2007

    • Author(s)
      Liu, XP, Kawauchi, S, Oga, A, Sato, T, Ikemoto, K, Ikeda, E, Sasaki, K
    • Journal Title

      Oncology Reports 17

      Pages: 261-267

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Influence of cytological stains on comparative genomic hybridization analysis for DNA extracted from cytological smears2007

    • Author(s)
      Kawauchi S, et. al.
    • Journal Title

      Oncology Reports 18

      Pages: 1219-1223

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Gain of 5p15.33 is associated with progression of bladder cancer2007

    • Author(s)
      Yamamoto Y, et. al.
    • Journal Title

      Oncology 72

      Pages: 132-138

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Chromosomal aberrations detected by comparative genomic hybridization predict outcome in patients with colorectal carcinoma2007

    • Author(s)
      Liu XP,and et. al.
    • Journal Title

      Oncology Reports 17

      Pages: 261-267

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Significance of cyclin E and p27 expression in malignant ovarian germ cell tumors : correlation with the cell proliferation activity and clinicopathologic features.2007

    • Author(s)
      Kawauchi S, et al.
    • Journal Title

      Oncology Reports 16・5

      Pages: 1029-1033

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Significance of cyclin E and p27 expression in malignant ovarian germ cell tumors: correlation with the cell proliferation activity and clinicopat hologic features.2006

    • Author(s)
      Kawauchi S, et. al.
    • Journal Title

      Oncology Reports 16

      Pages: 1029-1033

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Significance of cyclin E and p27 expression in malignant ovarian germ cell tumors : correlation with the cell proliferation activity and clinicopathologic features2006

    • Author(s)
      Kawauchi, S, Yamamoto, Y, Uchida, K, Chochi, Y, Kondo T, Oga, A, Sasaki, K
    • Journal Title

      Oncology Reports 16-5

      Pages: 1029-1033

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] In situ MSP法によるp16遺伝子プロモーター領域シトシンメチル化細胞の可視化2008

    • Author(s)
      河内茂人, 他
    • Organizer
      第97回日本病理学会総会
    • Place of Presentation
      金沢
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Significance of dual-color FISH with 9p21 and chromosome 9 centromeric probes for prediction of recurrent baldder cancer2007

    • Author(s)
      河内 茂人, その他
    • Organizer
      第66回日本癌学会学術総会
    • Place of Presentation
      横浜
    • Year and Date
      2007-10-03
    • Related Report
      2007 Annual Research Report
  • [Presentation] In situ methylation-specific polymerase chain reaction for detecting cells bearing p16 gene promoter CpG islands hypermethylation on a tissue section2007

    • Author(s)
      Kawauchi, S, Suehiro, Y, Chochi, Y, Kondo, T, Oga, A, Sasaki, K
    • Organizer
      97th Japanese Society of Pathology
    • Place of Presentation
      Kanazawa, JPN.
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] 子宮腫瘍病理アトラス2007

    • Author(s)
      本山 悌一, 他
    • Total Pages
      325
    • Publisher
      文光堂
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Remarks] 「研究成果報告書概要(和文)」より

    • URL

      http://ds.cc.yamaguchi-u.ac.jp/~2byouri/index.html

    • Related Report
      2007 Final Research Report Summary
  • [Remarks]

    • URL

      http://ds.cc.yamaguchi-u.ac.jp/~2byouri/framepage2.html

    • Related Report
      2007 Annual Research Report

URL: 

Published: 2006-04-01   Modified: 2016-04-21  

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