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Molecular Genetics of Holoprosencephaly

Research Project

Project/Area Number 18591177
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Pediatrics
Research InstitutionKitasato University (2007)
National Research Institute for Child Health and Development (2006)

Principal Investigator

MIYASHITA Toshiyuki  Kitasato University, School of Medicine, Dept. of Molecular Genetics, Professor (60174182)

Co-Investigator(Kenkyū-buntansha) FIKII Katsunori  Chiba University, Graduate School of Medicine, Dept. of Pediatrics, Research Associate (70344992)
Project Period (FY) 2006 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥4,010,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥510,000)
Fiscal Year 2007: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2006: ¥1,800,000 (Direct Cost: ¥1,800,000)
KeywordsGenetics / Holoprosencephaly / Cerebral Development / Polymorphism
Research Abstract

Holoprosencephaly (HPE) is a congenital disorder in which the formation of cerebral hemisphere is inhibited to a various degree. We found a patient with middle interhemispheric variant (also called syntelencephaly), a subtype of HPE, carrying a deletion in the long arm of chromosome 6. Using a high-resolution oligonucleotide microarray, we showed that the deletion is about 10 Mb-long including a promoter, exon 1 and exon 2 of the EYA4 gene. This result prompted us to investigate the function of the EYA4 protein.
The luciferase assay using a Gli-luciferase reporter revealed that EYA4 promotes sonic hedgehog (SHH) pathway in cooperation with SIX3, a product of one of the HPE responsible genes. Moreover, EYA4 colocalized with SIX3 in the nucleus when tagged proteins were transiently expressed in HeLa cells and these two proteins were coimmunoprecipitated with each other. These results indicate that EYA4 promotes SHH pathway directly or indirectly by associating with SIX3 and, therefore, is one of the candidate genes for HPE.

Report

(3 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • Research Products

    (22 results)

All 2008 2007 2006

All Journal Article (20 results) (of which Peer Reviewed: 7 results) Presentation (2 results)

  • [Journal Article] ステロイドの抗腫瘍作用-マイクロアレイを用いた作用機序の解析-2008

    • Author(s)
      宮下 俊之
    • Journal Title

      日本臨床 66

      Pages: 89-93

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Journal Article] Anti-tumor activities of steroids - lessons from microarray analysis2008

    • Author(s)
      Miyashita, T., et. al.
    • Journal Title

      Nippon Rinsho 66

      Pages: 89-93

    • NAID

      40015772102

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Spectrum of mutations in the tumor-suppressor gene, PATCHED-1,in patients with nevoid basal cell carcinoma syndrome2007

    • Author(s)
      Miyashita, T.
    • Journal Title

      Neuro-oncol 9

      Pages: 183-183

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] High-density oligonucleotide array with sub-kilobase resolution reveals breakpoint information of submicroscopic deletions in nevoid basal cell carcinoma syndrome2007

    • Author(s)
      Fujii, K.
    • Journal Title

      Hum.Genet 122

      Pages: 459-466

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] A new mutation of the PTCH gene in a patient with nevoid basal cell carcinoma syndrome associated with West syndrome2007

    • Author(s)
      Tachi, N.
    • Journal Title

      Pediatr.Neurol 37

      Pages: 363-365

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] U7 snRNA-mediated correction of aberrant splicing caused by activation of cryptic splice sites2007

    • Author(s)
      Uchikawa, H.
    • Journal Title

      J.Hum.Genet 52

      Pages: 891-897

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Pached-1遺伝子と母斑基底細胞癌症候群2007

    • Author(s)
      宮下 俊之
    • Journal Title

      家族性腫瘍 7

      Pages: 97-101

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Spectrum of mutations in the tumor-suppressor gene, PATCHED-1, in patients with nevoid basal cell carcinoma syndrome2007

    • Author(s)
      Miyashita, T., et. al.
    • Journal Title

      Neuro-oncol 9

      Pages: 183-183

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] High-density oligonucleotide array with sub-kilobase resolution reveals breakpoint information of submicroscopic deletions in nevoid basal cell carcinoma syndrome2007

    • Author(s)
      Fujii, K., et. al.
    • Journal Title

      Hum. Genet 122

      Pages: 459-466

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] A new mutation of the PTCH gene in a patient with nevoid basal cell carcinoma syndrome associated with West syndrome2007

    • Author(s)
      Tachi, N., et. al.
    • Journal Title

      Pediatr. Neurol 37

      Pages: 363-365

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] U7 snRNA-mediated correction of aberrant splicing caused by activation of cryptic splice sites2007

    • Author(s)
      Uchikawa, H., et. al.
    • Journal Title

      J. Hum. Genet 52

      Pages: 891-897

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Patched-1 and Nevoid Basal Cell Carcinoma Syndrome2007

    • Author(s)
      Miyashita, T., et. al.
    • Journal Title

      Journal of Familial Tumor 7

      Pages: 97-101

    • NAID

      130007534760

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Spectrum of mutations in the tumor-suppressor gene,PATCHED-1,in patients with nevoid basal cell carcinoma syndrome.2007

    • Author(s)
      Miyashita, T.
    • Journal Title

      Neuro-oncol. 9

      Pages: 183-183

    • Related Report
      2007 Annual Research Report
  • [Journal Article] High-density oligonucleotide array with sub-kilobase resolution reveals breakpoint information of submicroscopic deletions in nevoid basal cell carcinoma syndrome.2007

    • Author(s)
      Fujii, K.
    • Journal Title

      Hum.Genet. 122

      Pages: 459-466

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A new mutation of the PTCH gene in a patient with nevoid basal cell carcinom a syndrome associated with West syndrome.2007

    • Author(s)
      Tachi, N.
    • Journal Title

      Pediatr.Neurol. 37

      Pages: 363-365

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] U7 snRNA-mediated correction of aberrant splicing caused by activation of cryptic splice sites.2007

    • Author(s)
      Uchikawa, H.
    • Journal Title

      J.Hum.Genet. 52

      Pages: 891-897

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Patched-1遺伝子と母斑基底細胞癌症候群.2007

    • Author(s)
      宮下 俊之
    • Journal Title

      家族性腫瘍 34

      Pages: 97-101

    • NAID

      130007534760

    • Related Report
      2007 Annual Research Report
  • [Journal Article] Brain- and heart-specific Patched-1 containing exon 12b is a dominant negative isoform and is expressed in medulloblastomas2006

    • Author(s)
      Uchikawa H
    • Journal Title

      Biochem Biophys Res Commun 349(1)

      Pages: 277-283

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Brain- and heart-specific Patched-1 containing exon 12b is a dominant negative isoform and is expressed in medulloblastomas2006

    • Author(s)
      Uchikawa, H, et. al.
    • Journal Title

      Biochem Biophys Res Commun 349(1)

      Pages: 277-283

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Brain- and heart-specific Patched-l containing exon 12b is a dominant negative isoform and is expressed in medulloblastomas.2006

    • Author(s)
      Uchikawa H, et al.
    • Journal Title

      Biochem Biophys Res Commun 349(1)

      Pages: 277-283

    • Related Report
      2006 Annual Research Report
  • [Presentation] 高密度オリゴヌクレオチドマイクロアレイを用いた遺伝子欠損の解析と切断点の迅速決定2007

    • Author(s)
      宮下 俊之
    • Organizer
      第30回日本分子生物学会年会
    • Place of Presentation
      横浜市
    • Year and Date
      2007-12-13
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] Rapid identification of deletion breakpoints using high resolution oligonucleotide microarrays2007

    • Author(s)
      Miyashita, T., et. al.
    • Organizer
      Annual Meeting, the Molecular Biology Society of Japan
    • Place of Presentation
      Yokohama
    • Year and Date
      2007-12-13
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary

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Published: 2006-04-01   Modified: 2016-04-21  

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