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Quantification of transcripts in testes preparation and its application to other tissue sections

Research Project

Project/Area Number 18591801
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Obstetrics and gynecology
Research InstitutionOkayama University

Principal Investigator

SASAKI Junzo  Okayama University, Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, Professor (30093686)

Co-Investigator(Kenkyū-buntansha) MIKI Yukari  Okayama University, Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, Researcher (70397876)
YAMADA Teruo  Okayama University, Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, Assistant Professor (00033225)
KOSAKA Jun  Okayama University, Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, Associate Professor (40243216)
FUJITA Hirofumi  Okayama University, Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, Assistant Professor (20423288)
Project Period (FY) 2006 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥3,920,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥420,000)
Fiscal Year 2007: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2006: ¥2,100,000 (Direct Cost: ¥2,100,000)
KeywordsAnatomy / Cell and tissue / Testis / In situ hybridization / Gene / mRNA / PERF 15 / Quantification of signals / PERF15 / 核酸 / 定量化
Research Abstract

Testis was a suitable organ for quantifying the ISH signals because germ cells undergo synchronized development and show stage-specific gene expression. Previously, we used ribosomal RNA as the hybridizable RNA in paraffin sections and could easily analyze ISH signals expressed with digoxygenin-labeled probes quantitatively, through "posterization" of the images. In the present project, we applied this method to analyze the quantification of transcripts, PERF 15 mRNA. PERF 15 was a 15 kDa protein found in the perforatorium of the sperm head and identified as a.testis lipid binding protein. To determine an absolute quantity of transcripts in tissue sections, we further analyzed the signals by a Confocal Laser Scanning microscope with the use of a tyramide signal amplification system.
The peak of PERF 15 mRNA expression was found in diplotene spermatocytes, and the amount of PERF 15 mRNA w as greatest in late pachytene and diplotene primary spermatocytes and early spermatids, followed by early pachytene primary spermatocytes, and then late spermatids. PERF 15 may be involved in the events leading to meiotic division, in which apoptosis is also involved.
The present study could help our attempt to determine the concentration of mRNA in the tissue section. In this protocol, we made glass slides on which a tissue section and row of oligonucleotides spots were placed to determine the concentration of mRNA in a tissue section. These spots, 110 pm in diameter, consisted of 1 nl of sense and antisense mRNA sequences, from 0-1 × 10^<-6> M to 500 M, and we attempted to compare the signal intensity in the tissue section with the signal intensity in the spots containing known concentrations of the given mRNA.

Report

(3 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • Research Products

    (34 results)

All 2008 2007 2006 2003 Other

All Journal Article (21 results) (of which Peer Reviewed: 9 results) Presentation (9 results) Book (2 results) Remarks (2 results)

  • [Journal Article] Flow cytometric analysis of Ca^<2+>-induced membrane permeability transition of isolated rat liver mitochondria.2008

    • Author(s)
      Teruo Umegaki, et. al.
    • Journal Title

      Journal of Clinical Biochemistry and Nutrition 42

      Pages: 35-44

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Alpha-lipoic acid suppresses 6-hydroxydopamine-induced ROS generation and apoptosis through the stimulation of glutathione synthesis but not by the expression of heme oxygenase-12008

    • Author(s)
      Hirofumi Fujita, et. al.
    • Journal Title

      Brain research 1206

      Pages: 1-12

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Regulation of 5-aminolevulinic acid-dependent protoporphyrin IX accumulations in human histiocytic lymphoma U937 cells2008

    • Author(s)
      Yuya Okimura, et. al.
    • Journal Title

      Physiol. Chemistry & Phys. and Med. NMR 39(In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Alpha-lipoic acid suppresses 6-hydroxydopamine-induced ROS generation and apoptosis through the stimulation of glutathione synthesis but not by the expression of heme oxygenase-12008

    • Author(s)
      Hirofumi, Fujita, Masahiko, Shiosaka, Tetsuya, Ogino, Yuya, Okimura, Toshihiko, Utsumi, Eisuke, F., Sato, Reiko, Akagi, Masayasu, Inoue, Kozo, Utsumi, Junzo, Sasaki
    • Journal Title

      Brain researc 1206

      Pages: 1-12

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Flow cytometric analysis of Ca2+-induced membrane permeability transition of isolated rat liver mitochondria.2008

    • Author(s)
      Teruo Umegaki
    • Journal Title

      Journal of Clinical Biochemistry and Nutrition 42

      Pages: 35-44

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Alpha-lipoic acid suppresses 6-hydroxydopamine-induced ROS generation and apoptosis through the stimulation of glutathione synthesis but not by the expression of hemeoxygenase-12008

    • Author(s)
      Hirofumi Fujita
    • Journal Title

      Brain research 1206

      Pages: 1-12

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Regulation of 5-aminolevulinic acid-dependent protoporphyrin IX accumulations in human histiocytic lymphoma U937 cells2008

    • Author(s)
      Yuya Okimura
    • Journal Title

      Physiol, Chemistry & Phys. and Med. NMR 39

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Histological observation of the development of follicles and follicular atresia in immature ovaries.2007

    • Author(s)
      Koji Takagi, et. al.
    • Journal Title

      Acta Med Okayama 61

      Pages: 283-298

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Gene profiles during root canal treatment in experimental rat periapical lesions.2007

    • Author(s)
      Zulema Rosalia Arias Martinez, et. al.
    • Journal Title

      Journal of Endodontics 33

      Pages: 936-943

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Histological observation of the development of follicles and follicular atresia in immature ovaries2007

    • Author(s)
      Takagi, K., Yamada, T., Miki, Y., Umegaki, T., Nishimura, M., Sasaki, J
    • Journal Title

      Acta Med Okayama 61(5)

      Pages: 283-298

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Gene profiles during root canal treatment in experimental rat periapical lesions2007

    • Author(s)
      Zulema, Rosalia, Arias, Martinez, Koji, Naruishi, Keisuke, Yamashiro, Fumio, Myokai, Teruo, Yamada, Kaori, Matsuura, Naoko, Namba, Hideo, Arai, Junzo, Sasaki, Yoshimitsu, Abiko, Shogo, Takashiba
    • Journal Title

      Journal of Endodontics 33

      Pages: 936-943

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] α-リポ酸と細胞死2007

    • Author(s)
      藤田洋史
    • Journal Title

      New Food Industry 49.3

      Pages: 29-35

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Quantification of PERF 15 mRNA in tissue sections from rat testes.2006

    • Author(s)
      Takashi Kogami, et. al.
    • Journal Title

      Acta Histochemica et Cytocchemica 39

      Pages: 182-192

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Quantification of PERF 15 mRNA in tissue sections from rat testes2006

    • Author(s)
      Takashi, Kogami, Yukari, Mild, Teruo, Yamada, Teruo, Umegaki, Makoto, Nishimura, Takashi, Amo, Jun, Kosaka, Junzo, Sasaki
    • Journal Title

      Acta Histochemica et Cytocchemica 39(6)

      Pages: 183-192

    • NAID

      110006203407

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] 6-hydorxydopamineによるPC12細胞の細胞死とα-リポ酸(ALIPURE)の抑制機構2006

    • Author(s)
      藤田洋史
    • Journal Title

      医学と薬学 55.6

      Pages: 857-866

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Cell-permeable cAMP analog suppresses 6-hydoroxydopamine-induced apoptosis in PC12 cells through the activation of Akt pathway2006

    • Author(s)
      Hirofumi Fujita
    • Journal Title

      Brain Res 1113

      Pages: 10-23

    • Related Report
      2006 Annual Research Report
  • [Journal Article] 4-Hydoroxy-3,5,3',4'-tetrachlorobiphenyl induced membrane permeability transition in isolated rat liver mitochondria2006

    • Author(s)
      Hirofumi Fujita
    • Journal Title

      J. Clin. Biochem. Nutr. 38

      Pages: 167-175

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Quantification of PERF 15 mRNA in tissue sections from rat testes2006

    • Author(s)
      Takashi Kogami
    • Journal Title

      Acta Histochem. Cytochem. 39.6

      Pages: 183-192

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Stimulation of membrane permeability transition by α-lipoic acid and its biochemical characteristics2006

    • Author(s)
      Sanae Aoyama
    • Journal Title

      Physiol. Chem. Phys. & Med. NMR 38

      Pages: 1-20

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Flow cytometric analysis of Ca^<2+>induced membrane permeability transition of isolated rat liver mitochondria2003

    • Author(s)
      Teruo, Umegaki, Yuya, Okimura, Hirofumi, Fujita, Hiromi, Yano, Jitsuo, Akiyama, Masayasu, Inoue, Kozo, Utsumi, Junzo, Sasaki
    • Journal Title

      Journal of Clinical Biochemistry and Nutrition 42

      Pages: 35-44

    • NAID

      130004879129

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Regulation of 5-aminolevulinic acid-dependent protoporphyrin IX accumulations in human histiocytic lymphoma U937 cells2003

    • Author(s)
      Yuya, Okimura, Hirofumi, Fujita, Tetsuya, Ogino, Keiji, Inoue, Hiromi, Yano, Tatsuji, Yasuda, Masayasu, Inoue, Kozo, Utsumi, Junzo, Sasaki
    • Journal Title

      Physiol. Chemistry & Phys. and Med. NMR (In press)

      Pages: 39-39

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Role of α-lipoic acid on mitochondrial functions, redox metabolism and apoptosis of cells. International Conference on Food Factors for health promotion2007

    • Author(s)
      Hirofumi Fujita, et. al.
    • Organizer
      International Conference on Food Factors for health promotion
    • Place of Presentation
      Kyoto
    • Year and Date
      2007-11-30
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Role of α-lipoic acid on mitochondrial functions, redox metabolism and apoptosis of cells. International Conference on Food Factors for health promotion2007

    • Author(s)
      Hirofumi Fujita
    • Organizer
      International Conference on Food Factors forhealth promotion
    • Place of Presentation
      Kyoto
    • Year and Date
      2007-11-30
    • Related Report
      2007 Annual Research Report
  • [Presentation] DNA microarray analysis on genes expressed in periapical lesion.2007

    • Author(s)
      Zulema Rosalia Arias Martinez, et. al.
    • Organizer
      International Association for Dental Research & American Association for Dental Research
    • Place of Presentation
      New Orleans, Louisiana,
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Suppression of 6-hydroxydopamine-induced apoptosis by antioxidant biofactor (AOB)through the stimulation of glutation synthesis in PC12 cells.2007

    • Author(s)
      Hirofumi Fujita, et. al.
    • Organizer
      7th AOB Conference
    • Place of Presentation
      Taipei
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Regulation of of 5-aminolevulinic acid-mediated protoporphyrin IX-accumulation and its photodynamic action in U937 cells.2007

    • Author(s)
      Hirofumi Fujita, et. al.
    • Organizer
      International Conference on Food Factors for health promotion
    • Place of Presentation
      Kyoto
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] DNA microarray analysis on genes expressed in periapical lesion2007

    • Author(s)
      Arias Martinez, ZR., Yamashiro, K., Naruishi, K., Matsuura, K., Myokai, F., Yamada, T., Sasaki, J., Arai, H., Abiko, Y., Takashiba, S
    • Organizer
      International Association for Dental Research & American Association for Dental Research
    • Place of Presentation
      New Orleans, Louisiana
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Suppression of 6-hydroxydopamine-induced apoptosis by antioxidant biofactor(AOB)through the stimulation of glutation synthesis in PC12 cells2007

    • Author(s)
      Hirofumi, Fujita, Shinya, Nakagawa, Kozo, Utsumi, Junzo, Sasaki
    • Organizer
      7th AOB Conference
    • Place of Presentation
      Taipei
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Role of α-lipoic acid on mitochondrial functions, redox metabolism and apoptosis of cells2007

    • Author(s)
      Hirofumi, Fujita, Youya, Okimura, Toshihiko, Utsumi, Eisuke, Sato, Kozo, Utsumi, Junzou, Sasaki
    • Organizer
      International Conference on Food Factors for health promotion
    • Place of Presentation
      Kyoto
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Regulation of of 5-aminolevulinic acid-mediated protoporphyrin IX-accumulation and its photodynamic action in U937 cells2007

    • Author(s)
      Hirofumi, Fujita, Yuya, Okimura, Tetsuya, Ogino, Tatsuji, Yasuda, Koichi, Abe, Kozo, Utsumi, Junzo, Sasaki
    • Organizer
      International Conference on Food Factors for, health promotion
    • Place of Presentation
      Kyoto
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] ピタミンE研究の進歩XIII:フローサイトメーターによる微量ミトコンドリアの機能解析2008

    • Author(s)
      沖村祐弥
    • Publisher
      クニ企画株式会社(ビタミシE研究会編)(印刷中)
    • Related Report
      2007 Annual Research Report
  • [Book] ビタミンE研究の進歩 XIII

    • Author(s)
      沖村祐弥
    • Publisher
      フローサイトメーターによる微量ミトコンドリアの機能解析(In press)
    • Related Report
      2006 Annual Research Report
  • [Remarks] 「研究成果報告書概要(和文)」より

    • URL

      http://square.umin.ac.jp/oka-anat/

    • Related Report
      2007 Final Research Report Summary
  • [Remarks]

    • URL

      http://square.umin.ac.jp/oka-anat/

    • Related Report
      2007 Annual Research Report

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Published: 2006-04-01   Modified: 2016-04-21  

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