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Study on alternative splicing of mRNA where the coding region of the prion protein gene.

Research Project

Project/Area Number 18602006
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 食の安全
Research InstitutionNational Institute of Health Sciences

Principal Investigator

KIKUCHI Yutaka  National Institute of Health Sciences, Division of Microbiology, Researcher (10234197)

Project Period (FY) 2006 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥4,240,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥540,000)
Fiscal Year 2007: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Fiscal Year 2006: ¥1,900,000 (Direct Cost: ¥1,900,000)
Keywordsprion / alternative splicing / GPI-anchor / hypoxia / 選択的スプライシング / スプライシング
Research Abstract

The human prion protein (PrP) is a glycoprotein with a glycasylphosphatidylinositol (GPI) anchor at its C-terminus. Here I report alternative splicing within exon 2 of the PrP gene (PRNP) in the human glioblastoma cell line T98G. An open reading frame of the alternatively spliced mRNA lacked the GPI anchor signal sequence and encoded a 230-amino acid polypeptide. Its product, GPI-anchorless PrP (GPI^-PrPSV), was unglycosylated and nonionic detergent-soluble and was found in the cytosolic fraction. I also detected low levels of alternatively spliced mRNA in human brain and non-neuronal tissues. On the other hand, I find alternative splicing within exon 3 of the PrP gene in the bovine cornea cell line BCE C/D-lb. The open reading frame of the bovine alternatively spliced mRNA lacked the GPI anchor signal sequence and encoded a 260-amino acid polypeptide. When long-term passaged T98G cells were placed in a low-oxygen environment, alternatively spliced mRNA expression increased while ordinary PrP mRNA expression decreased. These findings imply that oxygen tensions regulate GPI^-PrPSV expression in T98G cells.

Report

(3 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • Research Products

    (15 results)

All 2008 2007 2006

All Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (14 results)

  • [Journal Article] Hypoxia induces expression of a GPI-anchorless splice variant of the prion protein.2008

    • Author(s)
      Kikuchi, Y.
    • Journal Title

      FEBS Journal 275

      Pages: 2965-2976

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Presentation] Effect of hypoxia on the expression of a splice variant of prion protein mRNA lacking the GPI anchor signal sequence in human glioblastoma cell line T98G2007

    • Author(s)
      Kikuchi, Y.
    • Organizer
      Keystone Symposia : Molecular Mechanisms of Neurodegeneration
    • Place of Presentation
      Taos, New Mexico, USA
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] GPIアンカー欠損型プリオン蛋白質産生に及ぼす低酸素応答の影響に関する研究2007

    • Author(s)
      菊池裕
    • Organizer
      2007年プリオン研究会
    • Place of Presentation
      新潟県中魚沼郡津南町
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Hypoxia induces an expression of a GPI-anchorless splice variant of prion protein in a human glioblastoma cell line T98G2007

    • Author(s)
      菊池裕
    • Organizer
      第30回日本分子生物学会年会第80回日本生化学会大会合同大会
    • Place of Presentation
      横浜市
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] Effect of hypoxia on the expression of a splice variant of prion protein mRNA lacking the GPI anchor signal sequence in human glioblastoma cell line T98G.2007

    • Author(s)
      Kikuchi, Y.
    • Organizer
      Keystone Symposia : Molecular Mechanisms of Neurodegeneration
    • Place of Presentation
      Taos, New Mexico, USA
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Expression of a GPI-anchorless splice variant of prion protein under hypoxia.2007

    • Author(s)
      Kikuchi, Y.
    • Organizer
      Prion Symposium 2007
    • Place of Presentation
      Tsunan-machi, Nakauonuma, Niigata
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Hypoxia induces an expression of a GPI-anchorless splice variant of prion protein in a human glioblastoma cell line T98G.2007

    • Author(s)
      Kikuchi, Y.
    • Organizer
      Biochemistry and Molecular Biology 2007
    • Place of Presentation
      Yokohama
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] GPIアンカー欠損型プリオン蛋白質産生に及ぼす低酸素応答の影響に関する研究2007

    • Author(s)
      菊池 裕
    • Organizer
      2007年プリオン研究会
    • Place of Presentation
      新潟県津南町
    • Related Report
      2007 Annual Research Report
  • [Presentation] 組換えヒトプリオンタンパクの発現と精製2007

    • Author(s)
      中島 治
    • Organizer
      2007年プリオン研究会
    • Place of Presentation
      新潟県津南町
    • Related Report
      2007 Annual Research Report
  • [Presentation] 正常型プリオンタンパク質のプロセッシングの意義2007

    • Author(s)
      遊佐 精一
    • Organizer
      2007年プリオン研究会
    • Place of Presentation
      新潟県津南町
    • Related Report
      2007 Annual Research Report
  • [Presentation] 組換えプリオンタンパクの発現と精製2007

    • Author(s)
      中島 治
    • Organizer
      第30回日本分子生物学会年会第80回日本生化学会大会合同大会
    • Place of Presentation
      横浜市
    • Related Report
      2007 Annual Research Report
  • [Presentation] Expression of a splice variant of prion protein in human glioblastoma cell line T98G2006

    • Author(s)
      Kikuchi, Y.
    • Organizer
      20th International Congress of Biochemistry and Molecular Biology and 11th FABMB Congress
    • Place of Presentation
      京都市
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] ヒトプリオンペプチドの好中球様HL-60細胞に対する走化性の評価に関する研究2006

    • Author(s)
      菊池裕
    • Organizer
      Prion Symposium in Tohoku 2006
    • Place of Presentation
      岩手県八幡平市安比高原
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Expression of a splice variant of prion protein in human glioblastoma cell line T98G.2006

    • Author(s)
      Kikuchi, Y.
    • Organizer
      20th International Congress of Biochemistry and Molecular Biology and 11th FABMB Congress
    • Place of Presentation
      Kyoto
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Effects of human prion protein peptide on neutrophil-like differentiated HL-60 cells.2006

    • Author(s)
      Kikuchi, Y.
    • Organizer
      Prion Symposium in Tohoku 2006
    • Place of Presentation
      Appi Kogen, Hachimantai, Iwate
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary

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Published: 2006-04-01   Modified: 2016-04-21  

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