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Study of a Parallel I/O System with a Portable Data Format for Data-Intensive Applications

Research Project

Project/Area Number 18700074
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Computer system/Network
Research InstitutionKinki University

Principal Investigator

TSUJITA Yuichi  Kinki University, 工学部, 講師 (70360435)

Project Period (FY) 2006 – 2008
Project Status Completed (Fiscal Year 2008)
Budget Amount *help
¥3,950,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥150,000)
Fiscal Year 2008: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2007: ¥500,000 (Direct Cost: ¥500,000)
Fiscal Year 2006: ¥2,800,000 (Direct Cost: ¥2,800,000)
Keywordsネットワークコンピューティング / 並列入出力 / PCクラスタ / MPI / MPI-I / O / Stampi / netCDF / parallel netCDF
Research Abstract

可搬性のあるデータ形式をサポートする大規模並列入出力を実現するため、異機種計算機間通信ライブラリStampiをベースに、可搬性のあるデータ形式をサポートする並列入出力インタフェースであるParallel netCDF(以下、PnetCDF)を計算機間でも透過的に利用可能にする研究開発を行った.その結果、計算機間で並列入出力を利用する際に生じる性能低下を低く抑える改善を行い、大規模なデータを可搬性のあるデータ形式で効率的に入出力を行うことが可能になった.

Report

(4 results)
  • 2008 Annual Research Report   Final Research Report ( PDF )
  • 2007 Annual Research Report
  • 2006 Annual Research Report
  • Research Products

    (21 results)

All 2008 2007 2006

All Journal Article (12 results) (of which Peer Reviewed: 10 results) Presentation (9 results)

  • [Journal Article] Yuichi Tsujita, Implementing A Parallel NetCDF Interface for Seamless Remote I/O Using Multi-dimensional Data2008

    • Author(s)
      Yuichi Tsujita,
    • Journal Title

      High Performance Computing for Computational Science-VECPAR 2008, Revised Selected Papers, Lecture Notes in Computer Science Vol. 5336

      Pages: 69-82

    • Related Report
      2008 Final Research Report
    • Peer Reviewed
  • [Journal Article] Feasibility Study of Effective Remote I/O Using a Parallel NetCDF Interface in a Long-Latency Network2008

    • Author(s)
      Yuichi Tsujita,
    • Journal Title

      Proceedings of the International Multi-Conference of Engineers and Computer Scientists 2008 Vol.1

      Pages: 242-247

    • Related Report
      2008 Final Research Report
    • Peer Reviewed
  • [Journal Article] Implementing A Parallel NetCDF Interface for Seamless Remote I/O Using Multi-dimensional Data2008

    • Author(s)
      Yuichi Tsujita
    • Journal Title

      Lecture Notes in Computer Science 5336

      Pages: 69-82

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Feasibility Study of Effective Remote I/O Using a Parallel NetCDF Inter face in a Long-Latency Network2008

    • Author(s)
      Yuichi Tsujita
    • Journal Title

      Proceedings of the International Multi-Conference of Engineers and Computer Scientists 2008 1

      Pages: 242-247

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] An Empirical Study of Optimization in Seamless Remote MPI-I/O for Long Latency Network2007

    • Author(s)
      Yuichi Tsujita
    • Journal Title

      Lecture Notes in Computer Science Vol. 4757

      Pages: 389-390

    • Related Report
      2008 Final Research Report
    • Peer Reviewed
  • [Journal Article] Supporting Seamless Remote I/O Using a Parallel NetCDF Interface2007

    • Author(s)
      Yuichi Tsujita
    • Journal Title

      Distributed and Parallel Systems-From Cluster to Grid Computing

      Pages: 81-90

    • Related Report
      2008 Final Research Report
    • Peer Reviewed
  • [Journal Article] Implementation of a Parallel NetCDF Interface for Seamless Collective Remote I/O2007

    • Author(s)
      Yuichi Tsujita
    • Journal Title

      Proceedings of IADIS International Conference on Applied Computing 2007

      Pages: 732-736

    • NAID

      40015422252

    • Related Report
      2008 Final Research Report 2006 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Supporting Seamless Remote I/O Using a Parallel NetCDF Interface2007

    • Author(s)
      Yuichi Tsujita
    • Journal Title

      Distributed and Parallel Systems-From Cluster to Grid Computing-

      Pages: 81-90

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] An Empirical Study of Optimization in Seamless Remote MPI-I/O for Long Latency Network2007

    • Author(s)
      Yuichi Tsujita
    • Journal Title

      Lecture Notes in Computer Science 4757

      Pages: 389-390

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Effective Seamless Remote MPI-I/O with Derived Data Types Using PVFS22006

    • Author(s)
      Yuichi Tsujita
    • Journal Title

      Vol. 4192

      Pages: 230-237

    • Related Report
      2008 Final Research Report
    • Peer Reviewed
  • [Journal Article] Effective Seamless Remote MPI-I/O with Derived Data Types Using PVFS22006

    • Author(s)
      Yuichi Tsujita
    • Journal Title

      Lecture Notes in Computer Science 4192

      Pages: 230-137

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Parallel netCDFインタフェースにとる計算機間集団型人出力機能の実装2006

    • Author(s)
      辻田 祐一
    • Journal Title

      情報処理学会研究報告 2006-HPC-108 Vol. 2006,No. 106

      Pages: 31-36

    • Related Report
      2006 Annual Research Report
  • [Presentation] Implementing A ParallelNetCDF Interface for Seamless Remote I/O Using Multi-Dimensional Data2008

    • Author(s)
      Yuichi Tsujita
    • Organizer
      VECP AR2008
    • Place of Presentation
      Toulouse, France, Jun
    • Related Report
      2008 Final Research Report
  • [Presentation] Feasibility Study of Effective Remote I/O Using a Parallel NetCDF Interface in a Long-Latency Network2008

    • Author(s)
      Yuichi Tsujita
    • Organizer
      The International Multi-Conference of Engineers and Computer Scientists 2008
    • Place of Presentation
      Hong-King, China
    • Related Report
      2008 Final Research Report
  • [Presentation] Implementing A Parallel NetCDF Interface for Seamless Remote I/O Using Multi-Dimensional Data2008

    • Author(s)
      Yuichi Tsujita
    • Organizer
      VECPAR2008
    • Place of Presentation
      フランス(ツールーズ)
    • Related Report
      2008 Annual Research Report
  • [Presentation] An Empirical Study of Optimization in Seamless Remote MPI-I/O for Long Latency Network2007

    • Author(s)
      Yuichi Tsujita
    • Organizer
      14th Europe an PVM/MPI User's Group Meeting
    • Place of Presentation
      Paris, France
    • Year and Date
      2007-10-03
    • Related Report
      2008 Final Research Report
  • [Presentation] Implementation of a Parallel NetCDF Interface for Seamless Collective Remote I/O2007

    • Author(s)
      Yuichi Tsujita
    • Organizer
      IADIS International C onference on Applied Computing 2007
    • Place of Presentation
      Salamanca, Spain
    • Related Report
      2008 Final Research Report
  • [Presentation] Parallel netCDFインタフェースによる計算機間集団型入出力機能の実装2006

    • Author(s)
      辻田祐一
    • Organizer
      情報処理学会第108回HPC研究会
    • Place of Presentation
      京都大学
    • Year and Date
      2006-10-06
    • Related Report
      2008 Final Research Report
  • [Presentation] Supporting Seamless Remote I/O Using A Parallel NetCDF Interface2006

    • Author(s)
      Yuichi Tsujita
    • Organizer
      6th Austrian-Hungarian Workshop on Distributed and Parallel Systems (DAPS YS2006)
    • Place of Presentation
      Innsbruck, Austria
    • Related Report
      2008 Final Research Report
  • [Presentation] Implementation of a Parallel NetCDF Interface for Seamless Colle ctive Remote I/O2006

    • Author(s)
      Yuichi Tsujita
    • Organizer
      13th European PVM/MPI User's Group Meeting Late and Breaking Results
    • Place of Presentation
      Bonn, Germany
    • Related Report
      2008 Final Research Report
  • [Presentation] Effective Seamless Remote MPI-I/O with Derived Data Types Using PVFS22006

    • Author(s)
      Yuichi Tsujita
    • Organizer
      13th European PVM/MPI User's Group Meeting
    • Place of Presentation
      Bonn, Germany
    • Related Report
      2008 Final Research Report

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Published: 2006-04-01   Modified: 2016-04-21  

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