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Elucidation of mechanisms linking between molecular behavior and activation as a basis for in-cell single-molecule screening

Research Project

Project/Area Number 18H01839
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Review Section Basic Section 28040:Nanobioscience-related
Research InstitutionInstitute of Physical and Chemical Research

Principal Investigator

Hiroshima Michio  国立研究開発法人理化学研究所, 生命機能科学研究センター, 上級研究員 (20392087)

Project Period (FY) 2018-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2021)
Budget Amount *help
¥15,860,000 (Direct Cost: ¥12,200,000、Indirect Cost: ¥3,660,000)
Fiscal Year 2020: ¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2019: ¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2018: ¥5,980,000 (Direct Cost: ¥4,600,000、Indirect Cost: ¥1,380,000)
Keywords1分子イメージング / 細胞内シグナル伝達 / 薬剤スクリーニング / 1分子イメージング・ナノ計測 / 1分子生体情報学 / 1分子生体情報学
Outline of Final Research Achievements

Epidermal growth factor receptor (EGFR), which transmits primarily cell proliferation signals into cells after binding with an extracellular cytokine, concerns with critical diseases such as cancers. However, how EGFR regulates the cell responses through its molecular behavior remains unrevealed. In this study, we measured EGFR behaviors of both wild type and cancerous mutants by single-molecule imaging in cells and succeeded to detect changes in the molecular structures from the mobilities. Not only effects of anti-cancer drugs on EGFR but also the resistance of mutants against drugs were reflected in the behaviors. Furthermore, the activity of downstream signaling could be read out from the oligomerization of EGFR. The findings in the study will be a basis for a novel drug screening.

Academic Significance and Societal Importance of the Research Achievements

細胞内の注目する分子を一つ一つイメージングする技術により計測した分子のふるまいから、抗癌剤などの薬剤が分子の活性化に与える影響を定量的に解析できる。本研究では、分子の動態がどのように活性化レベルを反映するか、そのメカニズムの解明に取り組んだ。新しく得られた知見から、1分子解析データには分子の構造や反応だけでなく、細胞膜環境や細胞応答の程度など想定を超える情報が含まれていることが分かった。この計測・解析手法をロボティクスやAIにより自動化し大規模解析を可能とすれば、新規の薬剤スクリーニング法として応用できることが示唆された。

Report

(4 results)
  • 2021 Final Research Report ( PDF )
  • 2020 Annual Research Report
  • 2019 Annual Research Report
  • 2018 Annual Research Report
  • Research Products

    (19 results)

All 2021 2020 2019 2018 Other

All Journal Article (8 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 8 results,  Open Access: 7 results) Presentation (6 results) (of which Invited: 4 results) Book (1 results) Remarks (2 results) Patent(Industrial Property Rights) (2 results) (of which Overseas: 1 results)

  • [Journal Article] Cell-to-cell diversification in ERBB-RAS-MAPK signal transduction that produces cell-type specific growth factor responses2021

    • Author(s)
      Miyagi Hiraku、Hiroshima Michio、Sako Yasushi
    • Journal Title

      Biosystems

      Volume: 199 Pages: 104293-104293

    • DOI

      10.1016/j.biosystems.2020.104293

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] In-Cell Single-Molecule Analysis of Molecular State and Reaction Kinetics Coupling2021

    • Author(s)
      Hiroshima Michio、Sako Yasushi
    • Journal Title

      Advanced Imaging and Bio Techniques for Convergence Science

      Volume: 1310 Pages: 59-80

    • DOI

      10.1007/978-981-33-6064-8_3

    • ISBN
      9789813360631, 9789813360648
    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] AIにより実現した細胞内1分子動態の大規模網羅的イメージング2020

    • Author(s)
      廣島 通夫
    • Journal Title

      CICSJ Bulletin

      Volume: 38 Issue: 1 Pages: 12

    • DOI

      10.11546/cicsj.38.12

    • NAID

      130007960374

    • ISSN
      0913-3747, 1347-2283
    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Large scale single-molecule imaging aided by artificial intelligence2020

    • Author(s)
      Hiroshima, M., Yasui, M., and Ueda, M.
    • Journal Title

      Microscopy

      Volume: 69 Issue: 2 Pages: 69-78

    • DOI

      10.1093/jmicro/dfz116

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Transient Acceleration of Epidermal Growth Factor Receptor Dynamics Produces Higher-Order Signaling Clusters2018

    • Author(s)
      Hiroshima Michio、Pack Chan-gi、Kaizu Kazunari、Takahashi Koichi、Ueda Masahiro、Sako Yasushi
    • Journal Title

      Journal of Molecular Biology

      Volume: 430 Issue: 9 Pages: 1386-1401

    • DOI

      10.1016/j.jmb.2018.02.018

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Automated single-molecule imaging in living cells2018

    • Author(s)
      Yasui Masato、Hiroshima Michio、Kozuka Jun、Sako Yasushi、Ueda Masahiro
    • Journal Title

      Nature Communications

      Volume: 9 Issue: 1 Pages: 1-11

    • DOI

      10.1038/s41467-018-05524-7

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Single-molecule diffusion-based estimation of ligand effects on G protein?coupled receptors2018

    • Author(s)
      Yanagawa Masataka、Hiroshima Michio、Togashi Yuichi、Abe Mitsuhiro、Yamashita Takahiro、Shichida Yoshinori、Murata Masayuki、Ueda Masahiro、Sako Yasushi
    • Journal Title

      Science Signaling

      Volume: 11 Issue: 548 Pages: 1-16

    • DOI

      10.1126/scisignal.aao1917

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Shift in Conformational Equilibrium Induces Constitutive Activity of G-Protein-Coupled Receptor, Rhodopsin.2018

    • Author(s)
      Maeda R, Hiroshima M, Yamashita T, Wada A, Sako Y, Shichida Y, Imamoto Y.
    • Journal Title

      J. Phys. Chem. B

      Volume: 122 Issue: 18 Pages: 4838-4843

    • DOI

      10.1021/acs.jpcb.8b02819

    • NAID

      120006708207

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] Pharmacological Application of Automated Single-molecule Analysis for EGFR Cancerous Mutants2020

    • Author(s)
      廣島通夫、渡邉大輔、上田昌宏
    • Organizer
      第58回 日本生物物理学会年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 細胞内 1 分子イメージングの自動化と 細胞内シグナル伝達への適用2020

    • Author(s)
      廣島通夫
    • Organizer
      CBI学会2020年大会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 全自動イメージングにより実現した網羅的1分子解析2019

    • Author(s)
      廣島通夫、上田昌宏
    • Organizer
      第44回レーザ顕微鏡研究会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Regulation of Downstream Signaling by Clusters of Epidermal Growth Factor Receptor2019

    • Author(s)
      Hiroshima Michio, Tomishige Nario, Ueda Masahiro, Kobayashi Toshihide, Sako Yasushi
    • Organizer
      第57回 日本生物物理学会年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 全自動化1分子イメージングによる大規模計測2019

    • Author(s)
      廣島通夫
    • Organizer
      CBI学会2019年大会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] In Cell Automated Single-molecule Analysis and Its Extensive Applications2018

    • Author(s)
      廣島通夫
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Book] イメージングの選び方・使い方100+, 第4章 超解像顕微鏡 「PALM/STORM」2018

    • Author(s)
      廣島通夫、上田昌宏
    • Total Pages
      2
    • Publisher
      羊土社
    • ISBN
      9784758103756
    • Related Report
      2018 Annual Research Report
  • [Remarks] 細胞内1分子自動観察システム「AiSIS」

    • URL

      http://www.riken.jp/pr/press/2018/20180926_1/

    • Related Report
      2018 Annual Research Report
  • [Remarks] 細胞膜の受容体1分子の動きから薬効を評価

    • URL

      http://www.riken.jp/pr/press/2018/20180919_1/

    • Related Report
      2018 Annual Research Report
  • [Patent(Industrial Property Rights)] オートフォーカス装置ならびにそれを備える光学装置および顕微鏡2018

    • Inventor(s)
      安井真人、廣島通夫、上田昌宏
    • Industrial Property Rights Holder
      安井真人、廣島通夫、上田昌宏
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2018-024408
    • Filing Date
      2018
    • Related Report
      2018 Annual Research Report
  • [Patent(Industrial Property Rights)] Method for evaluating activity of g protein-coupled receptor (gpcr)2018

    • Inventor(s)
      柳川正隆、佐甲靖志、廣島通夫、安井真人、上田昌宏、冨樫祐一
    • Industrial Property Rights Holder
      柳川正隆、佐甲靖志、廣島通夫、安井真人、上田昌宏、冨樫祐一
    • Industrial Property Rights Type
      特許
    • Filing Date
      2018
    • Related Report
      2018 Annual Research Report
    • Overseas

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Published: 2018-04-23   Modified: 2024-01-30  

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