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Evolution of STOP1 system that regulates multiple stress tolerance

Research Project

Project/Area Number 18H02113
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Review Section Basic Section 38010:Plant nutrition and soil science-related
Research InstitutionGifu University

Principal Investigator

Koyama Hiroyuki  岐阜大学, 応用生物科学部, 教授 (90234921)

Co-Investigator(Kenkyū-buntansha) 井内 聖  国立研究開発法人理化学研究所, バイオリソース研究センター, 専任研究員 (90312256)
Project Period (FY) 2018-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2021)
Budget Amount *help
¥16,120,000 (Direct Cost: ¥12,400,000、Indirect Cost: ¥3,720,000)
Fiscal Year 2020: ¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2019: ¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2018: ¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
KeywordsSTOP1 / 転写因子 / 酸耐性 / 乾燥耐性 / 冠水耐性 / 酸性土壌耐性 / 多面発現 / 発現制御 / カリウム / ストレス耐性 / 進化 / 遺伝子発現 / 転写制御 / ハイポキシア / 環境耐性
Outline of Final Research Achievements

Sensitive TO Proton Rhizotoxicity1(STOP1), encoding C2-H2 zinc finger transcription factor, regulates different stress tolerance mechanisms. Originally, STOP1 was identified as the critical transcription factor that regulates transcription of Al and proton tolerance genes of the roots of Arabidopsis. These phenotypes are critical for adapting to acid soils, which contain Al and proton rhizotoxicity as major stress factors. In the current study, we found that STOP1 co-regulates other stress tolerance pleiotropically such as hypoxia tolerance and drought tolerance. Chemical genetics and expression GWAS identified that Al-inducible expression of STOP1-regulated genes are coordinately regulated by other transcription factors, which are nearly specific to Al signal. Such combinations, i.e. STOP1 and specific transcription factor for each stress, may allow to harmonize growth and STOP-1 regulated traits. Finally, we found functional STOP1-ortholog in bryophyte.

Academic Significance and Societal Importance of the Research Achievements

植物や藻類の全遺伝子配列の解明が急速に進んでいます。このような状況では、作物やその近縁種に限らず、植物全体がどのように環境耐性を獲得して、異なる進化を遂げているかを調べることは、種を超えた画期的な品種改良の基盤となると基盤となると考えられます。この研究では、STOP1転写因子が、酸性土壌耐性、冠水、乾燥耐性や養分吸収を制御することと、その起源がコケ植物の分岐以前であることを明らかにしました。

Report

(4 results)
  • 2021 Final Research Report ( PDF )
  • 2020 Annual Research Report
  • 2019 Annual Research Report
  • 2018 Annual Research Report
  • Research Products

    (11 results)

All 2021 2020 2019 2018

All Journal Article (10 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 9 results,  Open Access: 6 results) Presentation (1 results) (of which Int'l Joint Research: 1 results,  Invited: 1 results)

  • [Journal Article] Synergistic and antagonistic pleiotropy of STOP1 in stress tolerance2021

    • Author(s)
      Sadhukhan Ayan、Kobayashi Yuriko、Iuchi Satoshi、Koyama Hiroyuki
    • Journal Title

      Trends in Plant Science

      Volume: 26 Issue: 10 Pages: 1014-1022

    • DOI

      10.1016/j.tplants.2021.06.011

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] High affinity promoter binding of STOP1 is essential for early expression of novel aluminum-induced resistance genes <i>GDH1</i> and <i>GDH2</i> in Arabidopsis2021

    • Author(s)
      Tokizawa Mutsutomo、Enomoto Takuo、Ito Hiroki、Wu Liujie、Kobayashi Yuriko、Mora-Maci?as Javier、Armenta-Medina Dagoberto、Iuchi Satoshi、Kobayashi Masatomo、Nomoto Mika、Tada Yasuomi、Fujita Miki、Shinozaki Kazuo、Yamamoto Yoshiharu Y、Kochian Leon V、Koyama Hiroyuki
    • Journal Title

      Journal of Experimental Botany

      Volume: 72 Issue: 7 Pages: 2769-2789

    • DOI

      10.1093/jxb/erab031

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Expression genome-wide association study identifies that phosphatidylinositol-derived signalling regulates ALUMINIUM SENSITIVE3 expression under aluminium stress in the shoots of Arabidopsis thaliana2021

    • Author(s)
      Sadhukhan Ayan、Agrahari Raj Kishan、Wu Liujie、Watanabe Toshihiro、Nakano Yuki、Panda Sanjib Kumar、Koyama Hiroyuki、Kobayashi Yuriko
    • Journal Title

      Plant Science

      Volume: 302 Pages: 110711-110711

    • DOI

      10.1016/j.plantsci.2020.110711

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Smart fertilizer management: the progress of imaging technologies and possible implementation of plant biomarkers in agriculture2021

    • Author(s)
      Agrahari Raj Kishan、Kobayashi Yuriko、Tanaka Takashi Sonam Tashi、Panda Sanjib Kumar、Koyama Hiroyuki
    • Journal Title

      Soil Science and Plant Nutrition

      Volume: 67 Issue: 3 Pages: 248-258

    • DOI

      10.1080/00380768.2021.1897479

    • NAID

      210000158903

    • Related Report
      2020 Annual Research Report
  • [Journal Article] Genome-Wide Association Study and Genomic Prediction Elucidate the Distinct Genetic Architecture of Aluminum and Proton Tolerance in Arabidopsis thaliana2020

    • Author(s)
      Yuki Nakano, Kazutaka Kusunoki, Owen A. Hoekenga, Keisuke Tanaka, Satoshi Iuchi, Yoichi Sakata, Masatomo Kobayashi, Yoshiharu Y. Yamamoto, Hiroyuki Koyama, Yuriko Kobayashi
    • Journal Title

      Front Plant Sci.

      Volume: 11 Pages: 1-16

    • DOI

      10.3389/fpls.2020.00405

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Sensitive to Proton Rhizotoxicity1 Regulates Salt and Drought Tolerance of Arabidopsis thaliana through Transcriptional Regulation of CIPK232019

    • Author(s)
      Sadhukhan Ayan、Enomoto Takuo、Kobayashi Yuriko、Watanabe Toshihiro、Iuchi Satoshi、Kobayashi Masatomo、Sahoo Lingaraj、Yamamoto Yoshiharu Y、Koyama Hiroyuki
    • Journal Title

      Plant and Cell Physiology

      Volume: 60 Issue: 9 Pages: 2113-2126

    • DOI

      10.1093/pcp/pcz120

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Redox balance, metabolic fingerprint and physiological characterization in contrasting North East Indian rice for Aluminum stress tolerance2019

    • Author(s)
      Awasthi Jay Prakash、Saha Bedabrata、Panigrahi Jogeswar、Yanase Emiko、Koyama Hiroyuki、Panda Sanjib Kumar
    • Journal Title

      Scientific Reports

      Volume: 9 Issue: 1

    • DOI

      10.1038/s41598-019-45158-3

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Agrobacterium rhizogenes-mediated hairy roots transformation as a tool for exploring aluminum-responsive genes function2019

    • Author(s)
      Daspute Abhijit A、Yunxuan Xian、Gu Minghua、Kobayashi Yuriko、Wagh Sopan、Panche Archana、Koyama Hiroyuki
    • Journal Title

      Future Science OA

      Volume: 5 Issue: 3

    • DOI

      10.4155/fsoa-2018-0065

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] STOP1 regulates the expression of HsfA2 and GDHs that are critical for low-oxygen tolerance in Arabidopsis2019

    • Author(s)
      Enomoto Takuo、Tokizawa Mutsutomo、Ito Hiroki、Iuchi Satoshi、Kobayashi Masatomo、Yamamoto Yoshiharu Y、Kobayashi Yuriko、Koyama Hiroyuki
    • Journal Title

      Journal of Experimental Botany

      Volume: in press Issue: 12 Pages: 3297-3311

    • DOI

      10.1093/jxb/erz124

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Organic acid excretion from roots: a plant mechanism for enhancing phosphorus acquisition, enhancing aluminum tolerance, and recruiting beneficial rhizobacteria2018

    • Author(s)
      Wu Liujie、Kobayashi Yuriko、Wasaki Jun、Koyama Hiroyuki
    • Journal Title

      Soil Science and Plant Nutrition

      Volume: 64 Issue: 6 Pages: 697-704

    • DOI

      10.1080/00380768.2018.1537093

    • NAID

      210000012049

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] Early aluminum signaling in Arabidopsis thaliana. - integration of eGWAS and chemical genetics uncover complex mechanism of Al-signaling and its cross-talk2018

    • Author(s)
      Hiroyuki Koyama
    • Organizer
      ICGEB Workshop - Plant responses to light and stress: emerging issues in climate change 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited

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Published: 2018-04-23   Modified: 2023-01-30  

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